Regulog Fnr - Shewanellaceae
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | |
| Biological process: | Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - CRP
- By effector - Oxygen
- By pathway - Anaerobic metabolism
| Genome | Genes | Operons |
|---|---|---|
| Shewanella amazonensis SB2B | 84 | 28 |
| Shewanella baltica OS155 | 92 | 31 |
| Shewanella denitrificans OS217 | 32 | 12 |
| Shewanella frigidimarina NCIMB 400 | 64 | 24 |
| Shewanella halifaxensis HAW-EB4 | 96 | 36 |
| Shewanella loihica PV-4 | 88 | 32 |
| Shewanella oneidensis MR-1 | 73 | 26 |
| Shewanella pealeana ATCC 700345 | 90 | 34 |
| Shewanella piezotolerans WP3 | 71 | 31 |
| Shewanella putrefaciens CN-32 | 82 | 28 |
| Shewanella sediminis HAW-EB3 | 105 | 38 |
| Shewanella sp ANA-3 | 85 | 30 |
| Shewanella sp MR-4 | 94 | 33 |
| Shewanella sp MR-7 | 94 | 33 |
| Shewanella sp W3-18-1 | 78 | 27 |
| Shewanella woodyi ATCC 51908 | 73 | 28 |
| Genes | Function | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||
| aceB |
Gene: Sama_2381: Malate synthase (EC 2.3.3.9) |
*
Shewanella baltica OS155 Site: position = -256 score = 4.35902 sequence = ATGATTTATATCAT Gene: Sbal_1316: Malate synthase (EC 2.3.3.9) |
Gene: Sden_1245: Malate synthase (EC 2.3.3.9) |
Gene: Sfri_1101: Malate synthase (EC 2.3.3.9) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -202 score = 4.30849 sequence = TTGTTGTAAATCAA Gene: Shal_1352: Malate synthase (EC 2.3.3.9) |
Gene: Shew_1275: Malate synthase (EC 2.3.3.9) |
Gene: SO1483: Malate synthase (EC 2.3.3.9) |
*
Shewanella pealeana ATCC 700345 Site: position = -161 score = 4.30849 sequence = TTGTTGTAAATCAA Gene: Spea_1290: Malate synthase (EC 2.3.3.9) |
Gene: swp_1433: Malate synthase (EC 2.3.3.9) |
Gene: Sputcn32_1238: Malate synthase (EC 2.3.3.9) |
Gene: Ssed_1414: Malate synthase (EC 2.3.3.9) |
Gene: Shewana3_2943: Malate synthase (EC 2.3.3.9) |
Gene: Shewmr4_2767: Malate synthase (EC 2.3.3.9) |
Gene: Shewmr7_2845: Malate synthase (EC 2.3.3.9) |
Gene: Sputw3181_2866: Malate synthase (EC 2.3.3.9) |
Gene: Swoo_1528: Malate synthase (EC 2.3.3.9) |
Malate synthase (EC 2.3.3.9) |
| aceA |
Gene: Sama_2380: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sbal_1317: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sden_1246: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sfri_1102: Isocitrate lyase (EC 4.1.3.1) |
|
Gene: Shew_1276: Isocitrate lyase (EC 4.1.3.1) |
Gene: SO1484: Isocitrate lyase (EC 4.1.3.1) |
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Gene: Sputcn32_1239: Isocitrate lyase (EC 4.1.3.1) |
Gene: Ssed_1415: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewana3_2942: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewmr4_2766: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewmr7_2844: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sputw3181_2865: Isocitrate lyase (EC 4.1.3.1) |
|
Isocitrate lyase (EC 4.1.3.1) |
| CRON 2. | |||||||||||||||||
| sucA |
*
Shewanella amazonensis SB2B Site: position = -165 score = 4.00811 sequence = ATGATATAGCTCAG Gene: Sama_1427: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Sbal_2515: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Sden_2183: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Sfri_2343: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -183 score = 4.40807 sequence = TTGATATAGCTCTA Gene: Shal_2489: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Shew_1655: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: SO1930: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Shewanella pealeana ATCC 700345 Site: position = -186 score = 4.40807 sequence = TTGATATAGCTCTA Gene: Spea_1788: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Shewanella piezotolerans WP3 Site: position = -184 score = 4.40807 sequence = TTGATATAGCTCTA Gene: swp_2949: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Sputcn32_2269: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Ssed_2814: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Shewana3_1710: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Shewmr4_1635: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Shewmr7_1710: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Sputw3181_1739: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Swoo_1837: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
| sucB |
Gene: Sama_1428: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Sbal_2514: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Sden_2182: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Sfri_2342: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Shal_2488: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Shew_1656: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: SO1931: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Spea_1789: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: swp_2948: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Sputcn32_2268: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Ssed_2813: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Shewana3_1711: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Shewmr4_1636: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Shewmr7_1711: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Sputw3181_1740: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
Gene: Swoo_1838: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2) |
| sucC |
Gene: Sama_1429: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Sbal_2513: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Sden_2181: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Sfri_2341: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Shal_2487: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Shew_1657: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: SO1932: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Spea_1790: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: swp_2947: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Sputcn32_2267: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Ssed_2812: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Shewana3_1712: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Shewmr4_1637: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Shewmr7_1712: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Sputw3181_1741: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Gene: Swoo_1839: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5) |
| sucD |
Gene: Sama_1430: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Sbal_2512: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Sden_2180: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Sfri_2340: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Shal_2486: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Shew_1658: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: SO1933: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Spea_1791: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: swp_2946: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Sputcn32_2266: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Ssed_2811: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Shewana3_1713: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Shewmr4_1638: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Shewmr7_1713: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Sputw3181_1742: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Gene: Swoo_1840: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
Succinyl-CoA ligase, alpha chain (EC 6.2.1.5) |
| CRON 3. | |||||||||||||||||
| Spea_3602 |
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*
Shewanella halifaxensis HAW-EB4 Site: position = -80 score = 4.47511 sequence = ATGAGCTAGCGCAA Gene: Shal_3691: Predicted sensor histidine kinase, two-component system |
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*
Shewanella pealeana ATCC 700345 Site: position = -80 score = 4.42113 sequence = ATGAACTAGCGCAA Gene: Spea_3602: Predicted sensor histidine kinase, two-component system |
*
Shewanella piezotolerans WP3 Site: position = -80 score = 4.47511 sequence = ATGAGCTAGCGCAA Gene: swp_0691: Predicted sensor histidine kinase, two-component system |
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Gene: Ssed_0740: Predicted sensor histidine kinase, two-component system |
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Predicted sensor histidine kinase, two-component system |
| Spea_3601 |
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Gene: Shal_3690: Predicted response regulator, two-component system |
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Gene: Spea_3601: Predicted response regulator, two-component system |
Gene: swp_0692: Predicted response regulator, two-component system |
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Gene: Ssed_0741: Predicted response regulator, two-component system |
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Predicted response regulator, two-component system |
| Shal_3689 |
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Gene: Shal_3689: Doubled CXXCH motif protein |
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Gene: Spea_3600: Doubled CXXCH motif protein |
Gene: swp_0694: Doubled CXXCH motif protein |
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Gene: Ssed_0742: Doubled CXXCH motif protein |
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Doubled CXXCH motif protein |
| CRON 4. | |||||||||||||||||
| oprP |
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*
Shewanella frigidimarina NCIMB 400 Site: position = -109 score = 4.24526 sequence = TTGATGGCGATCAT Gene: Sfri_3882: Phosphate-specific outer membrane porin |
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*
Shewanella piezotolerans WP3 Site: position = -113 score = 4.64352 sequence = TCGATCTAGATCAT Gene: swp_0235: Phosphate-specific outer membrane porin |
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*
Shewanella sediminis HAW-EB3 Site: position = -110 score = 4.59047 sequence = TTGAGCTGGATCAC Gene: Ssed_0367: Phosphate-specific outer membrane porin |
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Phosphate-specific outer membrane porin |
| phoX |
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Gene: Sfri_3883: Conserved hypothetical protein |
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Gene: swp_0234: Conserved hypothetical protein |
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Gene: Ssed_0368: Conserved hypothetical protein |
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Conserved hypothetical protein |
| phoU |
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Gene: Sfri_3884: Phosphate transport regulatory protein |
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Gene: swp_0233: Phosphate transport regulatory protein |
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Gene: Ssed_0369: Phosphate transport regulatory protein |
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Phosphate transport regulatory protein |
| pit |
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Gene: Sfri_3885: Predicted inorganic phosphate transporter |
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Gene: swp_0231: Predicted inorganic phosphate transporter |
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Gene: Ssed_0370: Predicted inorganic phosphate transporter |
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Predicted inorganic phosphate transporter |
| CRON 5. | |||||||||||||||||
| Sama_1615 |
Gene: Sama_1615: Predicted exported protein |
Gene: Sbal_1902: Predicted exported protein |
Gene: Sden_1504: Predicted exported protein |
Gene: Sfri_1443: Predicted exported protein |
*
Shewanella halifaxensis HAW-EB4 Site: position = -157 score = 4.09128 sequence = TTGATGTTAACCAA Gene: Shal_1843: Predicted exported protein |
Gene: Shew_2173: Predicted exported protein |
Gene: SO2113: Predicted exported protein |
*
Shewanella pealeana ATCC 700345 Site: position = -157 score = 4.68007 sequence = TTGATGTTAATCAA Gene: Spea_2437: Predicted exported protein |
*
Shewanella piezotolerans WP3 Site: position = -157 score = 4.68007 sequence = TTGATGTTAATCAA Gene: swp_2784: Predicted exported protein |
Gene: Sputcn32_1896: Predicted exported protein |
Gene: Ssed_2511: Predicted exported protein |
Gene: Shewana3_1893: Predicted exported protein |
Gene: Shewmr4_1835: Predicted exported protein |
Gene: Shewmr7_2142: Predicted exported protein |
Gene: Sputw3181_2112: Predicted exported protein |
*
Shewanella woodyi ATCC 51908 Site: position = -163 score = 4.59788 sequence = TCGATGTGGATCAA Gene: Swoo_2688: Predicted exported protein |
Predicted exported protein |
| CRON 6. | |||||||||||||||||
| Sfri_3879 |
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*
Shewanella frigidimarina NCIMB 400 Site: position = -79 score = 5.02853 sequence = TTGATCTAGATCGA Site: position = -249 score = 4.43705 sequence = AAGATCCAGATCAA Gene: Sfri_3879: Predicted sodium/sulphate symporter |
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*
Shewanella piezotolerans WP3 Site: position = -301 score = 4.92605 sequence = TAGATCTAGATCAA Site: position = -131 score = 4.98669 sequence = TTGATCTGGATCGA Gene: swp_0240: Predicted sodium/sulphate symporter |
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*
Shewanella sediminis HAW-EB3 Site: position = -80 score = 4.35209 sequence = TTGATCTCGATCGT Site: position = -250 score = 4.36253 sequence = ACGATCCAGATCAA Site: position = -212 score = 4.26248 sequence = TTGATCTGACACAA Gene: Ssed_0363: Predicted sodium/sulphate symporter |
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Predicted sodium/sulphate symporter |
| CRON 7. | |||||||||||||||||
| hcp |
*
Shewanella amazonensis SB2B Site: position = -109 score = 4.45202 sequence = ATGATCTGCTTCAA Gene: Sama_0895: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Sbal_1216: Hydroxylamine reductase (EC 1.7.-.-) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -121 score = 4.52192 sequence = GTGATGTGGCTCAT Gene: Sfri_3609: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Shal_1103: Hydroxylamine reductase (EC 1.7.-.-) |
*
Shewanella loihica PV-4 Site: position = -121 score = 4.08066 sequence = TTGATCCGCTTCAT Gene: Shew_1069: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: SO1363: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Spea_1055: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: swp_3762: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Sputcn32_1174: Hydroxylamine reductase (EC 1.7.-.-) |
*
Shewanella sediminis HAW-EB3 Site: position = -120 score = 4.44868 sequence = TTGATCTACTTCAT Gene: Ssed_1165: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Shewana3_3011: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Shewmr4_2832: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Shewmr7_2914: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Sputw3181_2990: Hydroxylamine reductase (EC 1.7.-.-) |
*
Shewanella woodyi ATCC 51908 Site: position = -121 score = 4.74854 sequence = TTGATCTGTCTCAA Gene: Swoo_1260: Hydroxylamine reductase (EC 1.7.-.-) |
Hydroxylamine reductase (EC 1.7.-.-) |
| hcr |
Gene: Sama_0896: HCP oxidoreductase, NADH-dependent |
Gene: Sbal_1217: HCP oxidoreductase, NADH-dependent |
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Gene: Sfri_3608: HCP oxidoreductase, NADH-dependent |
Gene: Shal_1104: HCP oxidoreductase, NADH-dependent |
Gene: Shew_1070: HCP oxidoreductase, NADH-dependent |
Gene: SO1364: HCP oxidoreductase, NADH-dependent |
Gene: Spea_1056: HCP oxidoreductase, NADH-dependent |
Gene: swp_3761: HCP oxidoreductase, NADH-dependent |
Gene: Sputcn32_1175: HCP oxidoreductase, NADH-dependent |
Gene: Ssed_1166: HCP oxidoreductase, NADH-dependent |
Gene: Shewana3_3010: HCP oxidoreductase, NADH-dependent |
Gene: Shewmr4_2831: HCP oxidoreductase, NADH-dependent |
Gene: Shewmr7_2913: HCP oxidoreductase, NADH-dependent |
Gene: Sputw3181_2989: HCP oxidoreductase, NADH-dependent |
Gene: Swoo_1261: HCP oxidoreductase, NADH-dependent |
HCP oxidoreductase, NADH-dependent |
| CRON 8. | |||||||||||||||||
| acnB |
Gene: Sama_0382: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Sbal_3905: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Sden_3377: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Sfri_3771: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -243 score = 4.32447 sequence = ATAATTTAGATCAA Gene: Shal_0482: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella loihica PV-4 Site: position = -136 score = 4.07251 sequence = GTGATCTGATTCAT Gene: Shew_3424: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: SO0432: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella pealeana ATCC 700345 Site: position = -264 score = 4.32447 sequence = ATAATTTAGATCAA Gene: Spea_0425: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella piezotolerans WP3 Site: position = -135 score = 4.07251 sequence = GTGATCTGATTCAT Gene: swp_4740: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Sputcn32_3409: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella sediminis HAW-EB3 Site: position = -137 score = 4.28052 sequence = GTGATCTGATTCAA Gene: Ssed_0438: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Shewana3_0433: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Shewmr4_0437: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Shewmr7_3592: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Sputw3181_0534: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Shewanella woodyi ATCC 51908 Site: position = -135 score = 4.28052 sequence = GTGATCTGATTCAA Gene: Swoo_0285: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
| CRON 9. | |||||||||||||||||
| narK |
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*
Shewanella halifaxensis HAW-EB4 Site: position = -184 score = 4.88669 sequence = ATGATCTAGGTCAA Gene: Shal_0176: Nitrate/nitrite antiporter |
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*
Shewanella sediminis HAW-EB3 Site: position = -212 score = 3.97487 sequence = GTGAGCTAGTGCAA Site: position = -182 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Ssed_1953: Nitrate/nitrite antiporter |
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*
Shewanella sp MR-4 Site: position = -75 score = 4.91479 sequence = TTGATTTACATCAA Gene: Shewmr4_2225: Nitrate/nitrite antiporter |
*
Shewanella sp MR-7 Site: position = -75 score = 4.91479 sequence = TTGATTTACATCAA Gene: Shewmr7_2301: Nitrate/nitrite antiporter |
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*
Shewanella woodyi ATCC 51908 Site: position = -166 score = 5.42594 sequence = ATGATCTGGATCAA Site: position = -196 score = 3.91888 sequence = GTGATCTGCTGCAA Gene: Swoo_2635: Nitrate/nitrite antiporter |
Nitrate/nitrite antiporter |
| narG |
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Gene: Shal_0177: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
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Gene: Ssed_1954: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
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Gene: Shewmr4_2226: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
Gene: Shewmr7_2302: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
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Gene: Swoo_2634: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
| narH |
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Gene: Shal_0178: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
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|
|
Gene: Ssed_1955: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
|
Gene: Shewmr4_2227: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: Shewmr7_2303: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
|
Gene: Swoo_2633: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
| narJ |
|
|
|
|
Gene: Shal_0179: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
|
|
|
|
Gene: Ssed_1956: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
Gene: Shewmr4_2228: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: Shewmr7_2304: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
Gene: Swoo_2632: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
| narI |
|
|
|
|
Gene: Shal_0180: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
|
|
|
|
Gene: Ssed_1957: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
Gene: Shewmr4_2229: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: Shewmr7_2305: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
Gene: Swoo_2631: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
| CRON 10. | |||||||||||||||||
| hyaA |
*
Shewanella amazonensis SB2B Site: position = -107 score = 4.22343 sequence = TTGACGTGTATCAA Gene: Sama_1679: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella baltica OS155 Site: position = -103 score = 4.85516 sequence = TTGATATACATCAA Site: position = -163 score = 3.78427 sequence = TAGATCTACGTCAT Gene: Sbal_1889: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -103 score = 4.72985 sequence = TTGATTTATATCAA Site: position = -164 score = 4.44868 sequence = TTGATCAACATCAT Gene: Sfri_2103: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -87 score = 3.93909 sequence = TTGACGCATATCAA Site: position = -148 score = 5.16517 sequence = ATGATCTAGCTCAA Site: position = -208 score = 3.80531 sequence = GTGATCTCCATCAC Gene: Shal_2261: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella loihica PV-4 Site: position = -160 score = 4.79381 sequence = TTGATCCAGCTCAT Site: position = -99 score = 4.23924 sequence = TTGACATACATCAA Site: position = -220 score = 4.65829 sequence = TTGAAGCGGATCAA Gene: Shew_1765: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella oneidensis MR-1 Site: position = -101 score = 4.81332 sequence = TTGATATGCATCAA Gene: SO2099: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -147 score = 5.16517 sequence = ATGATCTAGCTCAA Site: position = -86 score = 3.78775 sequence = TTGACTCATATCAA Gene: Spea_2033: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
Gene: swp_2639: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella putrefaciens CN-32 Site: position = -103 score = 4.85516 sequence = TTGATATACATCAA Gene: Sputcn32_2088: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella sediminis HAW-EB3 Site: position = -98 score = 4.4533 sequence = TTGATGTGAGTCAA Site: position = -158 score = 4.63853 sequence = ATGATCTAGTTCAT Gene: Ssed_1908: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella sp ANA-3 Site: position = -162 score = 4.32352 sequence = TAGATCTGCATCAT Site: position = -102 score = 4.81332 sequence = TTGATATGCATCAA Gene: Shewana3_1880: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella sp MR-4 Site: position = -162 score = 4.32352 sequence = TAGATCTGCATCAT Site: position = -102 score = 4.81332 sequence = TTGATATGCATCAA Gene: Shewmr4_1822: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella sp MR-7 Site: position = -162 score = 4.32352 sequence = TAGATCTGCATCAT Site: position = -102 score = 4.81332 sequence = TTGATATGCATCAA Gene: Shewmr7_2155: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
*
Shewanella sp W3-18-1 Site: position = -103 score = 4.85516 sequence = TTGATATACATCAA Gene: Sputw3181_1924: Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
|
Ni/Fe-hydrogenase, small chain precursor (EC 1.12.5.1) |
| hyaB |
Gene: Sama_1678: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Sbal_1888: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
|
Gene: Sfri_2104: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Shal_2262: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Shew_1764: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: SO2098: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Spea_2032: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: swp_2640: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Sputcn32_2089: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Ssed_1907: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Shewana3_1879: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Shewmr4_1821: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Shewmr7_2156: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
Gene: Sputw3181_1923: Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
|
Ni/Fe-hydrogenase, large chain (EC 1.12.5.1) |
| hyaC |
Gene: Sama_1677: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Sbal_1887: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
|
Gene: Sfri_2105: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Shal_2263: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Shew_1763: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: SO2097: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Spea_2031: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: swp_2641: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Sputcn32_2090: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Ssed_1906: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Shewana3_1878: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Shewmr4_1820: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Shewmr7_2157: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
Gene: Sputw3181_1922: Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
|
Ni/Fe hydrogenase, cytochrome b subunit (EC 1.12.5.1) |
| hyaD |
Gene: Sama_1676: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Sbal_1886: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
|
Gene: Sfri_2106: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Shal_2264: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Shew_1762: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: SO2096: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Spea_2030: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: swp_2642: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Sputcn32_2091: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Ssed_1905: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Shewana3_1877: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Shewmr4_1819: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Shewmr7_2158: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
Gene: Sputw3181_1921: Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
|
Ni/Fe hydrogenase, maturation protease (EC 1.12.5.1) |
| hyaE |
Gene: Sama_1675: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Sbal_1885: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
|
Gene: Sfri_2107: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Shal_2265: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Shew_1761: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: SO2095: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Spea_2029: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: swp_2643: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Sputcn32_2092: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Ssed_1904: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Shewana3_1876: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Shewmr4_1818: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Shewmr7_2159: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
Gene: Sputw3181_1920: Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
|
Ni/Fe hydrogenase, predicted component (EC 1.12.5.1) |
| hyaF |
Gene: Sama_1674: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Sbal_1884: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
|
Gene: Sfri_2108: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Shal_2266: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Shew_1760: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: SO2094: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Spea_2028: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: swp_2644: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Sputcn32_2093: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Ssed_1903: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Shewana3_1875: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Shewmr4_1817: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Shewmr7_2160: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
Gene: Sputw3181_1919: Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
|
Ni/Fe hydrogenase, metallocenter assembly protein (EC 1.12.5.1) |
| CRON 11. | |||||||||||||||||
| Sama_2599 |
*
Shewanella amazonensis SB2B Site: position = -83 score = 4.09594 sequence = TTGATGAGGATCAC Gene: Sama_2599: Predicted lipoprotein |
|
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -73 score = 5.02265 sequence = TTGATGTTGATCAA Gene: Sfri_3610: Predicted lipoprotein |
|
Gene: Shew_3086: Predicted lipoprotein |
|
|
|
|
*
Shewanella sediminis HAW-EB3 Site: position = -72 score = 4.59191 sequence = TTGACATAGATCAA Gene: Ssed_2168: Predicted lipoprotein |
|
*
Shewanella sp MR-4 Site: position = -82 score = 4.25502 sequence = TTGATTTACATCAC Gene: Shewmr4_1948: Predicted lipoprotein |
*
Shewanella sp MR-7 Site: position = -82 score = 4.25502 sequence = TTGATTTACATCAC Gene: Shewmr7_2028: Predicted lipoprotein |
|
|
Predicted lipoprotein |
| CRON 12. | |||||||||||||||||
| hmp |
|
*
Shewanella baltica OS155 Site: position = -68 score = 4.18168 sequence = TTGATCCAAATTAA Gene: Sbal_1014: Nitric oxide dioxygenase (EC 1.14.12.17) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -143 score = 5.04951 sequence = TTGATCTAGGTCAA Gene: Sfri_3699: Nitric oxide dioxygenase (EC 1.14.12.17) |
|
|
|
|
Gene: swp_4285: Nitric oxide dioxygenase (EC 1.14.12.17) |
|
|
*
Shewanella sp ANA-3 Site: position = -68 score = 4.96186 sequence = TTGATCCAAATCAA Gene: Shewana3_3174: Nitric oxide dioxygenase (EC 1.14.12.17) |
*
Shewanella sp MR-4 Site: position = -68 score = 4.96186 sequence = TTGATCCAAATCAA Gene: Shewmr4_2996: Nitric oxide dioxygenase (EC 1.14.12.17) |
*
Shewanella sp MR-7 Site: position = -68 score = 4.96186 sequence = TTGATCCAAATCAA Gene: Shewmr7_3077: Nitric oxide dioxygenase (EC 1.14.12.17) |
|
Gene: Swoo_0685: Nitric oxide dioxygenase (EC 1.14.12.17) |
Nitric oxide dioxygenase (EC 1.14.12.17) |
| CRON 13. | |||||||||||||||||
| nifS |
Gene: Sama_1506: Cysteine desulfurase (EC 2.8.1.7) |
|
|
|
|
*
Shewanella loihica PV-4 Site: position = -113 score = 5.07162 sequence = ATGATCTTGATCAA Gene: Shew_3354: Cysteine desulfurase (EC 2.8.1.7) |
|
*
Shewanella pealeana ATCC 700345 Site: position = -113 score = 4.68201 sequence = GTGATCTTGATCAT Gene: Spea_0544: Cysteine desulfurase (EC 2.8.1.7) |
*
Shewanella piezotolerans WP3 Site: position = -106 score = 4.68201 sequence = GTGATCTTGATCAT Gene: swp_4605: Cysteine desulfurase (EC 2.8.1.7) |
|
|
|
|
|
|
*
Shewanella woodyi ATCC 51908 Site: position = -101 score = 4.68201 sequence = GTGATCTTGATCAT Gene: Swoo_0566: Cysteine desulfurase (EC 2.8.1.7) |
Cysteine desulfurase (EC 2.8.1.7) |
| CRON 14. | |||||||||||||||||
| aer |
|
*
Shewanella baltica OS155 Site: position = -82 score = 4.01389 sequence = GTGAGCTTTATCAA Gene: Sbal_1238: Aerotaxis sensor receptor protein |
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -78 score = 3.89972 sequence = TTGATAGCAATCAA Gene: Shal_2428: Aerotaxis sensor receptor protein |
Gene: Shew_2159: Aerotaxis sensor receptor protein |
*
Shewanella oneidensis MR-1 Site: position = -80 score = 4.15495 sequence = GTGAACTTAATCAA Gene: SO3404: Aerotaxis sensor receptor protein |
Gene: Spea_1860: Aerotaxis sensor receptor protein |
*
Shewanella piezotolerans WP3 Site: position = -72 score = 4.92489 sequence = TTGATTTAAATCAA Gene: swp_1991: Aerotaxis sensor receptor protein |
*
Shewanella putrefaciens CN-32 Site: position = -32 score = 4.20893 sequence = GTGAGCTTAATCAA Gene: Sputcn32_2726: Aerotaxis sensor receptor protein |
Gene: Ssed_2690: Aerotaxis sensor receptor protein |
*
Shewanella sp ANA-3 Site: position = -80 score = 4.20893 sequence = GTGAGCTTAATCAA Gene: Shewana3_1150: Aerotaxis sensor receptor protein |
*
Shewanella sp MR-4 Site: position = -80 score = 4.20893 sequence = GTGAGCTTAATCAA Gene: Shewmr4_1149: Aerotaxis sensor receptor protein |
*
Shewanella sp MR-7 Site: position = -80 score = 4.20893 sequence = GTGAGCTTAATCAA Gene: Shewmr7_1220: Aerotaxis sensor receptor protein |
*
Shewanella sp W3-18-1 Site: position = -32 score = 4.20893 sequence = GTGAGCTTAATCAA Gene: Sputw3181_1286: Aerotaxis sensor receptor protein |
|
Aerotaxis sensor receptor protein |
| CRON 15. | |||||||||||||||||
| ydhD |
*
Shewanella amazonensis SB2B Site: position = -169 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Sama_1919: Glutaredoxin-related protein |
*
Shewanella baltica OS155 Site: position = -152 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Sbal_1783: Glutaredoxin-related protein |
*
Shewanella denitrificans OS217 Site: position = -133 score = 4.47186 sequence = GTGATGTGCATCAT Gene: Sden_1640: Glutaredoxin-related protein |
*
Shewanella frigidimarina NCIMB 400 Site: position = -151 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Sfri_1748: Glutaredoxin-related protein |
*
Shewanella halifaxensis HAW-EB4 Site: position = -150 score = 3.89442 sequence = GTGAAGTGTATCAT Gene: Shal_2335: Glutaredoxin-related protein |
*
Shewanella loihica PV-4 Site: position = -160 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Shew_1835: Glutaredoxin-related protein |
*
Shewanella oneidensis MR-1 Site: position = -153 score = 4.48196 sequence = GTGATGTGAATCAT Gene: SO2880: Glutaredoxin-related protein |
*
Shewanella pealeana ATCC 700345 Site: position = -150 score = 3.89442 sequence = GTGAAGTGTATCAT Gene: Spea_1964: Glutaredoxin-related protein |
*
Shewanella piezotolerans WP3 Site: position = -149 score = 3.89442 sequence = GTGAAGTGTATCAT Gene: swp_2753: Glutaredoxin-related protein |
*
Shewanella putrefaciens CN-32 Site: position = -152 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Sputcn32_1688: Glutaredoxin-related protein |
Gene: Ssed_2444: Glutaredoxin-related protein |
*
Shewanella sp ANA-3 Site: position = -153 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Shewana3_1640: Glutaredoxin-related protein |
*
Shewanella sp MR-4 Site: position = -153 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Shewmr4_1573: Glutaredoxin-related protein |
*
Shewanella sp MR-7 Site: position = -153 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Shewmr7_1648: Glutaredoxin-related protein |
*
Shewanella sp W3-18-1 Site: position = -152 score = 4.48196 sequence = GTGATGTGAATCAT Gene: Sputw3181_2337: Glutaredoxin-related protein |
Gene: Swoo_2160: Glutaredoxin-related protein |
Glutaredoxin-related protein |
| CRON 16. | |||||||||||||||||
| Sama_0549 |
*
Shewanella amazonensis SB2B Site: position = -135 score = 4.58862 sequence = TTGATTCACATCAA Site: position = -75 score = 4.27506 sequence = TTGATCAAGATCAG Gene: Sama_0549: Conserved hypothetical protein |
*
Shewanella baltica OS155 Site: position = -75 score = 4.27506 sequence = TTGATCAAGATCAG Gene: Sbal_3565: Conserved hypothetical protein |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -75 score = 4.27506 sequence = TTGATCAAGATCAG Gene: Sfri_0507: Conserved hypothetical protein |
*
Shewanella halifaxensis HAW-EB4 Site: position = -75 score = 4.03029 sequence = TTGACTAAGATCAA Gene: Shal_0680: Conserved hypothetical protein |
*
Shewanella loihica PV-4 Site: position = -87 score = 4.3992 sequence = TTGATCGAGATCAG Gene: Shew_3247: Conserved hypothetical protein |
|
*
Shewanella pealeana ATCC 700345 Site: position = -138 score = 4.226 sequence = ATGATCTACAACAT Site: position = -78 score = 4.15443 sequence = TTGACTGAGATCAA Gene: Spea_0593: Conserved hypothetical protein |
*
Shewanella piezotolerans WP3 Site: position = 0 score = 4.39343 sequence = TTGACCAAGATCAA Gene: swp_4510: Conserved hypothetical protein |
*
Shewanella putrefaciens CN-32 Site: position = -75 score = 4.23322 sequence = TTGATCAGGATCAG Gene: Sputcn32_0777: Conserved hypothetical protein |
*
Shewanella sediminis HAW-EB3 Site: position = -87 score = 4.3992 sequence = TTGATCGAGATCAG Site: position = -244 score = 4.19066 sequence = TTTATCTAGATCAC Gene: Ssed_4003: Conserved hypothetical protein |
*
Shewanella sp ANA-3 Site: position = -75 score = 4.23322 sequence = TTGATCAGGATCAG Gene: Shewana3_0738: Conserved hypothetical protein |
|
|
*
Shewanella sp W3-18-1 Site: position = -75 score = 4.23322 sequence = TTGATCAGGATCAG Gene: Sputw3181_3398: Conserved hypothetical protein |
*
Shewanella woodyi ATCC 51908 Site: position = -77 score = 4.3992 sequence = TTGATCGAGATCAG Gene: Swoo_4146: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 17. | |||||||||||||||||
| feoA |
Gene: Sama_1214: Ferrous iron transport protein A |
*
Shewanella baltica OS155 Site: position = -272 score = 4.01845 sequence = GTGATGTTGATCAC Site: position = -87 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Sbal_1594: Ferrous iron transport protein A |
Gene: Sden_2415: Ferrous iron transport protein A |
Gene: Sfri_2617: Ferrous iron transport protein A |
*
Shewanella halifaxensis HAW-EB4 Site: position = -92 score = 4.26934 sequence = TTGATCTAGGTAAA Site: position = -275 score = 4.12563 sequence = GTGATCTGTGTCAA Gene: Shal_2777: Ferrous iron transport protein A |
*
Shewanella loihica PV-4 Site: position = -89 score = 4.85043 sequence = TTGATCTAGATAAA Site: position = -241 score = 4.62641 sequence = GTGATCTAGATCAC Gene: Shew_2518: Ferrous iron transport protein A |
*
Shewanella oneidensis MR-1 Site: position = -87 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: SO1783: Ferrous iron transport protein A |
*
Shewanella pealeana ATCC 700345 Site: position = -92 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Spea_2691: Ferrous iron transport protein A |
*
Shewanella piezotolerans WP3 Site: position = -91 score = 4.85043 sequence = TTGATCTAGATAAA Gene: swp_3271: Ferrous iron transport protein A |
*
Shewanella putrefaciens CN-32 Site: position = -89 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Sputcn32_1480: Ferrous iron transport protein A |
*
Shewanella sediminis HAW-EB3 Site: position = -92 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Ssed_1531: Ferrous iron transport protein A |
*
Shewanella sp ANA-3 Site: position = -87 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Shewana3_2671: Ferrous iron transport protein A |
*
Shewanella sp MR-4 Site: position = -87 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Shewmr4_2505: Ferrous iron transport protein A |
*
Shewanella sp MR-7 Site: position = -87 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Shewmr7_2573: Ferrous iron transport protein A |
*
Shewanella sp W3-18-1 Site: position = -89 score = 4.26934 sequence = TTGATCTAGGTAAA Gene: Sputw3181_2621: Ferrous iron transport protein A |
Gene: Swoo_3123: Ferrous iron transport protein A |
Ferrous iron transport protein A |
| feoB |
Gene: Sama_1215: Ferrous iron transport protein B |
Gene: Sbal_1595: Ferrous iron transport protein B |
Gene: Sden_2414: Ferrous iron transport protein B |
Gene: Sfri_2616: Ferrous iron transport protein B |
Gene: Shal_2776: Ferrous iron transport protein B |
Gene: Shew_2517: Ferrous iron transport protein B |
Gene: SO1784: Ferrous iron transport protein B |
Gene: Spea_2690: Ferrous iron transport protein B |
Gene: swp_3270: Ferrous iron transport protein B |
Gene: Sputcn32_1481: Ferrous iron transport protein B |
Gene: Ssed_1532: Ferrous iron transport protein B |
Gene: Shewana3_2670: Ferrous iron transport protein B |
Gene: Shewmr4_2504: Ferrous iron transport protein B |
Gene: Shewmr7_2572: Ferrous iron transport protein B |
Gene: Sputw3181_2620: Ferrous iron transport protein B |
Gene: Swoo_3122: Ferrous iron transport protein B |
Ferrous iron transport protein B |
| CRON 18. | |||||||||||||||||
| coxB |
*
Shewanella amazonensis SB2B Site: position = -314 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sama_3483: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella baltica OS155 Site: position = -313 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sbal_0154: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella denitrificans OS217 Site: position = -312 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sden_3517: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -209 score = 4.79903 sequence = ATGATCCAAATCAA Site: position = -317 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sfri_0258: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -372 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Shal_0258: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella loihica PV-4 Site: position = -317 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Shew_0125: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella oneidensis MR-1 Site: position = -313 score = 4.89002 sequence = GTGATCTTGATCAA Gene: SO4606: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -349 score = 4.89002 sequence = GTGATCTTGATCAA Site: position = -246 score = 4.20371 sequence = TAGATCCTGATCAA Gene: Spea_3999: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella piezotolerans WP3 Site: position = -366 score = 4.89002 sequence = GTGATCTTGATCAA Gene: swp_4823: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella putrefaciens CN-32 Site: position = -305 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sputcn32_3782: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella sediminis HAW-EB3 Site: position = -339 score = 5.23445 sequence = TTGATCTTGATCAA Gene: Ssed_0198: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella sp ANA-3 Site: position = -314 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Shewana3_3991: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella sp MR-4 Site: position = -314 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Shewmr4_3791: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella sp MR-7 Site: position = -313 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Shewmr7_3864: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella sp W3-18-1 Site: position = -305 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Sputw3181_0133: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
*
Shewanella woodyi ATCC 51908 Site: position = -337 score = 4.89002 sequence = GTGATCTTGATCAA Gene: Swoo_0178: Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
Cytochrome c oxidase, polypeptide II (EC 1.9.3.1) |
| coxA |
Gene: Sama_3484: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Sbal_0153: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Sden_3518: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Sfri_0257: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Shal_0257: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Shew_0124: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: SO4607: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Spea_4000: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: swp_4824: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Sputcn32_3783: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Ssed_0197: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Shewana3_3992: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Shewmr4_3792: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Shewmr7_3865: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Sputw3181_0132: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Gene: Swoo_0177: Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
Cytochrome c oxidase, polypeptide I (EC 1.9.3.1) |
| coxZ |
Gene: Sama_3485: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Sbal_0152: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Sden_3519: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Sfri_0256: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Shal_0256: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Shew_0123: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: SO4608: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Spea_4001: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: swp_4825: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Sputcn32_3784: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Ssed_0196: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Shewana3_3993: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Shewmr4_3793: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Shewmr7_3866: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Sputw3181_0131: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Gene: Swoo_0176: Cytochrome c oxidase biogenesis protein, predicted copper delivery |
Cytochrome c oxidase biogenesis protein, predicted copper delivery |
| coxC |
Gene: Sama_3486: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Sbal_0151: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Sden_3520: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Sfri_0255: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Shal_0255: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Shew_0122: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: SO4609: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Spea_4002: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: swp_4826: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Sputcn32_3785: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Ssed_0195: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Shewana3_3994: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Shewmr4_3794: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Shewmr7_3867: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Sputw3181_0130: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Gene: Swoo_0175: Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
Cytochrome c oxidase, polypeptide III (EC 1.9.3.1) |
| CRON 19. | |||||||||||||||||
| ccoN |
*
Shewanella amazonensis SB2B Site: position = -218 score = 5.30443 sequence = TTGATCCAGATCAA Gene: Sama_1791: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*2
Shewanella baltica OS155 Site: position = -212 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -169 score = 4.50906 sequence = TTGATATTGCTCAA Gene: Sbal_2201: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) Site: position = -169 score = 4.50906 sequence = TTGATATTGCTCAA Site: position = -212 score = 5.63061 sequence = TTGATCTAGATCAA Gene: Sbal_4487: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella denitrificans OS217 Site: position = -220 score = 5.30443 sequence = TTGATCCAGATCAA Site: position = -178 score = 5.11619 sequence = TTGATGTAGCTCAA Gene: Sden_1851: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -224 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -182 score = 4.34893 sequence = TTGACTTAGCTCAA Gene: Sfri_2010: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -174 score = 4.90522 sequence = TTGATATAGCTCAA Site: position = -217 score = 5.63061 sequence = TTGATCTAGATCAA Gene: Shal_2197: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella loihica PV-4 Site: position = -174 score = 4.50906 sequence = TTGATATTGCTCAA Site: position = -217 score = 5.58877 sequence = TTGATCTGGATCAA Gene: Shew_1985: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella oneidensis MR-1 Site: position = -212 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -169 score = 4.24746 sequence = TTGACATGGCTCAA Site: position = -106 score = 4.2893 sequence = TTGACATAGCTCAA Gene: SO2364: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -172 score = 4.90522 sequence = TTGATATAGCTCAA Site: position = -215 score = 5.63061 sequence = TTGATCTAGATCAA Gene: Spea_2214: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella piezotolerans WP3 Site: position = -174 score = 4.2893 sequence = TTGACATAGCTCAA Site: position = -217 score = 5.63061 sequence = TTGATCTAGATCAA Gene: swp_2572: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella putrefaciens CN-32 Site: position = -210 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -167 score = 3.89314 sequence = TTGACATTGCTCAA Gene: Sputcn32_1959: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella sediminis HAW-EB3 Site: position = -216 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -173 score = 4.2893 sequence = TTGACATAGCTCAA Gene: Ssed_2211: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella sp ANA-3 Site: position = -210 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -167 score = 4.24746 sequence = TTGACATGGCTCAA Gene: Shewana3_2107: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella sp MR-4 Site: position = -167 score = 4.24746 sequence = TTGACATGGCTCAA Site: position = -210 score = 5.63061 sequence = TTGATCTAGATCAA Gene: Shewmr4_2006: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella sp MR-7 Site: position = -210 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -167 score = 4.24746 sequence = TTGACATGGCTCAA Gene: Shewmr7_1969: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella sp W3-18-1 Site: position = -167 score = 3.89314 sequence = TTGACATTGCTCAA Site: position = -210 score = 5.63061 sequence = TTGATCTAGATCAA Gene: Sputw3181_2046: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
*
Shewanella woodyi ATCC 51908 Site: position = -216 score = 5.63061 sequence = TTGATCTAGATCAA Site: position = -173 score = 4.2893 sequence = TTGACATAGCTCAA Gene: Swoo_2425: Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
Cytochrome c oxidase, cbb3-type, subunit CcoN (EC 1.9.3.1) |
| ccoO |
Gene: Sama_1792: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
2
Shewanella baltica OS155 Gene: Sbal_2202: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) Gene: Sbal_4488: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Sden_1850: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Sfri_2011: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Shal_2198: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Shew_1986: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: SO2363: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Spea_2215: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: swp_2573: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Sputcn32_1958: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Ssed_2212: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Shewana3_2108: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Shewmr4_2007: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Shewmr7_1968: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Sputw3181_2047: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Gene: Swoo_2424: Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
Cytochrome c oxidase, cbb3-type, subunit CcoO (EC 1.9.3.1) |
| ccoQ |
Gene: Sama_1793: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
2
Shewanella baltica OS155 Gene: Sbal_2203: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) Gene: Sbal_4489: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Sden_1849: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Sfri_2012: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Shal_2199: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Shew_1987: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: SO2362: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Spea_2216: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: swp_2574: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Sputcn32_1957: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Ssed_2213: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Shewana3_2109: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Shewmr4_2008: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Shewmr7_1967: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Sputw3181_2048: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Gene: Swoo_2423: Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
Cytochrome c oxidase, cbb3-type, subunit CcoQ (EC 1.9.3.1) |
| ccoP |
Gene: Sama_1794: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
2
Shewanella baltica OS155 Gene: Sbal_2204: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) Gene: Sbal_4490: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Sden_1848: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Sfri_2013: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Shal_2200: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Shew_1988: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: SO2361: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Spea_2217: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: swp_2575: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Sputcn32_1956: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Ssed_2214: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Shewana3_2110: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Shewmr4_2009: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Shewmr7_1966: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Sputw3181_2049: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Gene: Swoo_2422: Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
Cytochrome c oxidase, cbb3-type, subunit CcoP (EC 1.9.3.1) |
| ccoH |
Gene: Sama_1795: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
2
Shewanella baltica OS155 Gene: Sbal_4491: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH Gene: Sbal_2205: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Sden_1847: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Sfri_2014: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Shal_2201: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Shew_1989: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: SO2360: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Spea_2218: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: swp_2576: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Sputcn32_1955: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Ssed_2215: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Shewana3_2111: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Shewmr4_2010: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Shewmr7_1965: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Sputw3181_2050: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Gene: Swoo_2421: Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
Cytochrome c oxidase, cbb3-type, biogenesis protein CcoH |
| ccoI |
Gene: Sama_1796: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
2
Shewanella baltica OS155 Gene: Sbal_2206: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: Sbal_4492: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Sden_1846: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Sfri_2015: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Shal_2202: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Shew_1990: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: SO2359: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Spea_2219: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: swp_2577: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Sputcn32_1954: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Ssed_2216: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Shewana3_2112: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Shewmr4_2011: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Shewmr7_1964: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Sputw3181_2051: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Shewanella woodyi ATCC 51908 Site: position = -16 score = 4.45793 sequence = TTAAACTAGATCAA Gene: Swoo_2420: Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Cytochrome c oxidase, maturation protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
| ccoS |
Gene: Sama_1797: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
2
Shewanella baltica OS155 Gene: Sbal_2207: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion Gene: Sbal_4493: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Sden_1845: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Sfri_2016: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Shal_2203: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Shew_1991: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: SO2358: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Spea_2220: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: swp_2578: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Sputcn32_1953: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Ssed_2217: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Shewana3_2113: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Shewmr4_2012: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Shewmr7_1963: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Sputw3181_2052: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Gene: Swoo_2419: Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
Cytochrome c oxidase, maturation protein CcoS, involved in heme b insertion |
| ccoX |
Gene: Sama_1798: Cytochrome c oxidase, cbb3-type, predicted component |
2
Shewanella baltica OS155 Gene: Sbal_4494: Cytochrome c oxidase, cbb3-type, predicted component Gene: Sbal_2208: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Sden_1844: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Sfri_2017: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Shal_2204: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Shew_1992: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: SO2357: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Spea_2221: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: swp_2579: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Sputcn32_1952: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Ssed_2218: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Shewana3_2114: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Shewmr4_2013: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Shewmr7_1962: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Sputw3181_2053: Cytochrome c oxidase, cbb3-type, predicted component |
Gene: Swoo_2418: Cytochrome c oxidase, cbb3-type, predicted component |
Cytochrome c oxidase, cbb3-type, predicted component |
| fnr |
Gene: Sama_1799: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
2
Shewanella baltica OS155 Gene: Sbal_2209: Anaerobic metabolism transcriptional regulator Fnr, Fnr family Gene: Sbal_4495: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Sden_1843: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Sfri_2018: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Shal_2205: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
2
Shewanella loihica PV-4 Gene: Shew_1993: Anaerobic metabolism transcriptional regulator Fnr, Fnr family Gene: Shew_3233: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: SO2356: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Spea_2222: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: swp_2580: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Sputcn32_1951: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Ssed_2219: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Shewana3_2115: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Shewmr4_2014: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Shewmr7_1961: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Sputw3181_2054: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Gene: Swoo_2417: Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
Anaerobic metabolism transcriptional regulator Fnr, Fnr family |
| CRON 20. | |||||||||||||||||
| napE2 |
*
Shewanella amazonensis SB2B Site: position = -133 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Sama_1620: Periplasmic nitrate reductase component NapE |
*
Shewanella baltica OS155 Site: position = -171 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Sbal_1908: Periplasmic nitrate reductase component NapE |
*
Shewanella denitrificans OS217 Site: position = -69 score = 5.05055 sequence = CTGATCTAGATCAA Gene: Sden_1495: Periplasmic nitrate reductase component NapE |
*
Shewanella frigidimarina NCIMB 400 Site: position = -146 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Sfri_2555: Periplasmic nitrate reductase component NapE |
|
*
Shewanella loihica PV-4 Site: position = -181 score = 5.14161 sequence = ATGATCCAGATCAA Gene: Shew_1768: Periplasmic nitrate reductase component NapE |
|
*
Shewanella pealeana ATCC 700345 Site: position = -191 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Spea_2429: Periplasmic nitrate reductase component NapE |
|
*
Shewanella putrefaciens CN-32 Site: position = -172 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Sputcn32_1901: Periplasmic nitrate reductase component NapE |
|
*
Shewanella sp ANA-3 Site: position = -164 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Shewana3_1898: Periplasmic nitrate reductase component NapE |
*
Shewanella sp MR-4 Site: position = -164 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Shewmr4_1840: Periplasmic nitrate reductase component NapE |
*
Shewanella sp MR-7 Site: position = -164 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Shewmr7_2137: Periplasmic nitrate reductase component NapE |
*
Shewanella sp W3-18-1 Site: position = -172 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Sputw3181_2107: Periplasmic nitrate reductase component NapE |
Gene: Swoo_2682: Periplasmic nitrate reductase component NapE |
Periplasmic nitrate reductase component NapE |
| napD2 |
Gene: Sama_1621: Periplasmic nitrate reductase component NapD |
Gene: Sbal_1909: Periplasmic nitrate reductase component NapD |
Gene: Sden_1496: Periplasmic nitrate reductase component NapD |
Gene: Sfri_2554: Periplasmic nitrate reductase component NapD |
|
Gene: Shew_1769: Periplasmic nitrate reductase component NapD |
|
Gene: Spea_2428: Periplasmic nitrate reductase component NapD |
Gene: swp_2775: Periplasmic nitrate reductase component NapD |
Gene: Sputcn32_1902: Periplasmic nitrate reductase component NapD |
*
Shewanella sediminis HAW-EB3 Site: position = -245 score = 4.36379 sequence = GTGATGCGAATCAA Site: position = -275 score = 5.23609 sequence = TTGATCTGCATCAA Gene: Ssed_1912: Periplasmic nitrate reductase component NapD |
Gene: Shewana3_1899: Periplasmic nitrate reductase component NapD |
Gene: Shewmr4_1841: Periplasmic nitrate reductase component NapD |
Gene: Shewmr7_2136: Periplasmic nitrate reductase component NapD |
Gene: Sputw3181_2106: Periplasmic nitrate reductase component NapD |
Gene: Swoo_2681: Periplasmic nitrate reductase component NapD |
Periplasmic nitrate reductase component NapD |
| napA2 |
Gene: Sama_1622: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sbal_1910: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sden_1497: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sfri_2553: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
Gene: Shew_1770: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
Gene: Spea_2427: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: swp_2774: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sputcn32_1903: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Ssed_1913: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewana3_1900: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewmr4_1842: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewmr7_2135: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sputw3181_2105: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Swoo_2680: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
| napB2 |
Gene: Sama_1623: Nitrate reductase cytochrome c550-type subunit |
Gene: Sbal_1911: Nitrate reductase cytochrome c550-type subunit |
Gene: Sden_1498: Nitrate reductase cytochrome c550-type subunit |
Gene: Sfri_2552: Nitrate reductase cytochrome c550-type subunit |
|
Gene: Shew_1771: Nitrate reductase cytochrome c550-type subunit |
|
Gene: Spea_2426: Nitrate reductase cytochrome c550-type subunit |
Gene: swp_2773: Nitrate reductase cytochrome c550-type subunit |
Gene: Sputcn32_1904: Nitrate reductase cytochrome c550-type subunit |
Gene: Ssed_1914: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewana3_1901: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewmr4_1843: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewmr7_2134: Nitrate reductase cytochrome c550-type subunit |
Gene: Sputw3181_2104: Nitrate reductase cytochrome c550-type subunit |
Gene: Swoo_2679: Nitrate reductase cytochrome c550-type subunit |
Nitrate reductase cytochrome c550-type subunit |
| napC2 |
Gene: Sama_1624: Cytochrome c-type protein NapC |
Gene: Sbal_1912: Cytochrome c-type protein NapC |
Gene: Sden_1499: Cytochrome c-type protein NapC |
Gene: Sfri_2551: Cytochrome c-type protein NapC |
|
Gene: Shew_1772: Cytochrome c-type protein NapC |
|
Gene: Spea_2425: Cytochrome c-type protein NapC |
Gene: swp_2772: Cytochrome c-type protein NapC |
Gene: Sputcn32_1905: Cytochrome c-type protein NapC |
Gene: Ssed_1915: Cytochrome c-type protein NapC |
Gene: Shewana3_1902: Cytochrome c-type protein NapC |
Gene: Shewmr4_1844: Cytochrome c-type protein NapC |
Gene: Shewmr7_2133: Cytochrome c-type protein NapC |
Gene: Sputw3181_2103: Cytochrome c-type protein NapC |
Gene: Swoo_2678: Cytochrome c-type protein NapC |
Cytochrome c-type protein NapC |
| CRON 21. | |||||||||||||||||
| cyaB |
*
Shewanella amazonensis SB2B Site: position = -98 score = 4.28152 sequence = TTGATTCAGATCAC Gene: Sama_0861: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella baltica OS155 Site: position = -97 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Sbal_1182: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella denitrificans OS217 Site: position = -153 score = 4.97083 sequence = TTGATCTAGATCAC Gene: Sden_2784: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -154 score = 4.62826 sequence = TTGATCTAAATCAC Gene: Sfri_2947: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -95 score = 3.99177 sequence = TTGACTTAGATCAC Gene: Shal_1065: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella loihica PV-4 Site: position = -158 score = 3.99177 sequence = TTGACTTAGATCAC Gene: Shew_1036: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella oneidensis MR-1 Site: position = -158 score = 4.64466 sequence = TTGATCCAGATCAC Gene: SO1329: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella pealeana ATCC 700345 Site: position = -96 score = 3.99177 sequence = TTGACTTAGATCAC Gene: Spea_1019: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella piezotolerans WP3 Site: position = -94 score = 3.99177 sequence = TTGACTTAGATCAC Gene: swp_3798: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella putrefaciens CN-32 Site: position = -97 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Sputcn32_1140: Adenylate cyclase (EC 4.6.1.1) |
Gene: Ssed_1130: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella sp ANA-3 Site: position = -158 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Shewana3_3045: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella sp MR-4 Site: position = -158 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Shewmr4_2867: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella sp MR-7 Site: position = -158 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Shewmr7_2949: Adenylate cyclase (EC 4.6.1.1) |
*
Shewanella sp W3-18-1 Site: position = -97 score = 4.64466 sequence = TTGATCCAGATCAC Gene: Sputw3181_3024: Adenylate cyclase (EC 4.6.1.1) |
Gene: Swoo_1225: Adenylate cyclase (EC 4.6.1.1) |
Adenylate cyclase (EC 4.6.1.1) |
| CRON 22. | |||||||||||||||||
| cydA |
*
Shewanella amazonensis SB2B Site: position = -334 score = 4.3337 sequence = TTGATTTACGTCAA Gene: Sama_2349: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella baltica OS155 Site: position = -342 score = 4.87295 sequence = TTGATTTGCATCAA Gene: Sbal_2979: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella denitrificans OS217 Site: position = -153 score = 5.28803 sequence = TTGATCTAAATCAA Gene: Sden_1274: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -338 score = 4.21137 sequence = ATGATTGTGATCAA Gene: Sfri_1142: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -51 score = 4.3827 sequence = TTGATGGGGATCTA Site: position = -336 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Shal_1381: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella loihica PV-4 Site: position = -51 score = 4.3827 sequence = TTGATGGGGATCTA Site: position = -341 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Shew_1302: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella oneidensis MR-1 Site: position = -338 score = 4.88305 sequence = TTGATTTGAATCAA Gene: SO3286: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella pealeana ATCC 700345 Site: position = -51 score = 4.3827 sequence = TTGATGGGGATCTA Site: position = -337 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Spea_1318: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella piezotolerans WP3 Site: position = -332 score = 4.88305 sequence = TTGATTTGAATCAA Site: position = -51 score = 4.3827 sequence = TTGATGGGGATCTA Gene: swp_1469: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella putrefaciens CN-32 Site: position = -339 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Sputcn32_2641: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella sediminis HAW-EB3 Site: position = -336 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Ssed_3118: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella sp ANA-3 Site: position = -338 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Shewana3_1241: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella sp MR-4 Site: position = -338 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Shewmr4_1239: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella sp MR-7 Site: position = -338 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Shewmr7_1310: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella sp W3-18-1 Site: position = -339 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Sputw3181_1366: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
*
Shewanella woodyi ATCC 51908 Site: position = -334 score = 4.88305 sequence = TTGATTTGAATCAA Site: position = -51 score = 4.21988 sequence = ATGATGGGGATCTA Gene: Swoo_1565: Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
Cytochrome d ubiquinol oxidase, subunit I (EC 1.10.3.-) |
| cydB |
Gene: Sama_2348: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Sbal_2978: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Sden_1275: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Sfri_1143: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Shal_1382: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Shew_1303: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: SO3285: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Spea_1319: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: swp_1470: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Sputcn32_2640: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Ssed_3117: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Shewana3_1242: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Shewmr4_1240: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Shewmr7_1311: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Sputw3181_1367: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Gene: Swoo_1566: Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
Cytochrome d ubiquinol oxidase, subunit II (EC 1.10.3.-) |
| ybgT |
Gene: Sama_2347: Cyd operon protein YbgT |
Gene: Sbal_2977: Cyd operon protein YbgT |
Gene: Sden_1276: Cyd operon protein YbgT |
Gene: Sfri_1144: Cyd operon protein YbgT |
Gene: Shal_1383: Cyd operon protein YbgT |
Gene: Shew_1304: Cyd operon protein YbgT |
|
Gene: Spea_1320: Cyd operon protein YbgT |
Gene: swp_1471: Cyd operon protein YbgT |
Gene: Sputcn32_2639: Cyd operon protein YbgT |
Gene: Ssed_3116: Cyd operon protein YbgT |
Gene: Shewana3_1243: Cyd operon protein YbgT |
Gene: Shewmr4_1241: Cyd operon protein YbgT |
Gene: Shewmr7_1312: Cyd operon protein YbgT |
Gene: Sputw3181_1368: Cyd operon protein YbgT |
Gene: Swoo_1567: Cyd operon protein YbgT |
Cyd operon protein YbgT |
| CRON 23. | |||||||||||||||||
| etfD |
*
Shewanella amazonensis SB2B Site: position = -184 score = 4.61302 sequence = TTGGTCTGGATCAT Gene: Sama_3523: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: Sbal_0283: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: Sden_0100: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: Sfri_0081: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: Shal_0121: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella loihica PV-4 Site: position = -175 score = 3.87847 sequence = TTGTTTAAGATCAA Gene: Shew_0086: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella oneidensis MR-1 Site: position = -198 score = 4.34627 sequence = TTGATCAGGTTCAA Gene: SO4453: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: Spea_4121: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Gene: swp_5010: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella putrefaciens CN-32 Site: position = -198 score = 4.24694 sequence = TTGGCCTAGATCAA Gene: Sputcn32_0388: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella sediminis HAW-EB3 Site: position = -177 score = 4.5786 sequence = TTGCTCAAGATCAA Gene: Ssed_4403: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella sp ANA-3 Site: position = -202 score = 4.28867 sequence = TTGATCCGCTTCAA Gene: Shewana3_0273: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella sp MR-4 Site: position = -202 score = 4.28867 sequence = TTGATCCGCTTCAA Gene: Shewmr4_0272: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella sp MR-7 Site: position = -202 score = 4.28867 sequence = TTGATCCGCTTCAA Gene: Shewmr7_3749: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella sp W3-18-1 Site: position = -198 score = 4.24694 sequence = TTGGCCTAGATCAA Gene: Sputw3181_0242: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
*
Shewanella woodyi ATCC 51908 Site: position = -162 score = 4.53675 sequence = TTGCTCAGGATCAA Gene: Swoo_4794: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
| CRON 24. | |||||||||||||||||
| nrfX |
Gene: Sama_2901: Nitrite reductase, predicted component |
*
Shewanella baltica OS155 Site: position = -93 score = 3.77166 sequence = GTGATCGTGTTCAA Gene: Sbal_0180: Nitrite reductase, predicted component |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -111 score = 4.17779 sequence = TTGATTACGATCAA Gene: Sfri_0616: Nitrite reductase, predicted component |
*
Shewanella halifaxensis HAW-EB4 Site: position = -96 score = 4.68801 sequence = TTGATTTGTATCAA Gene: Shal_0300: Nitrite reductase, predicted component |
*
Shewanella loihica PV-4 Site: position = -282 score = 4.32188 sequence = TAGATCTTGATCAT Gene: Shew_3155: Nitrite reductase, predicted component |
|
*
Shewanella pealeana ATCC 700345 Site: position = -93 score = 4.72985 sequence = TTGATTTATATCAA Gene: Spea_3968: Nitrite reductase, predicted component |
Gene: swp_4118: Nitrite reductase, predicted component |
*
Shewanella putrefaciens CN-32 Site: position = -95 score = 3.77095 sequence = GTGATGCTGGTCAA Gene: Sputcn32_0312: Nitrite reductase, predicted component |
*3
Shewanella sediminis HAW-EB3 Site: position = -96 score = 4.92489 sequence = TTGATTTAAATCAA Gene: Ssed_0240: Nitrite reductase, predicted component Gene: Ssed_3564: Nitrite reductase, predicted component Site: position = -88 score = 5.28803 sequence = TTGATCTAAATCAA Gene: Ssed_0519: Nitrite reductase, predicted component |
*
Shewanella sp ANA-3 Site: position = -95 score = 4.16747 sequence = GTGATCTATGTCAA Gene: Shewana3_3963: Nitrite reductase, predicted component |
*
Shewanella sp MR-4 Site: position = -95 score = 4.16747 sequence = GTGATCTATGTCAA Gene: Shewmr4_3765: Nitrite reductase, predicted component |
*
Shewanella sp MR-7 Site: position = -95 score = 4.12563 sequence = GTGATCTGTGTCAA Gene: Shewmr7_3838: Nitrite reductase, predicted component |
Gene: Sputw3181_3896: Nitrite reductase, predicted component |
*
Shewanella woodyi ATCC 51908 Site: position = -88 score = 4.88305 sequence = TTGATTTGAATCAA Gene: Swoo_0239: Nitrite reductase, predicted component |
Nitrite reductase, predicted component |
| nrfB |
Gene: Sama_2902: Nitrite reductase, subunit B |
Gene: Sbal_0181: Nitrite reductase, subunit B |
|
Gene: Sfri_0615: Nitrite reductase, subunit B |
Gene: Shal_0301: Nitrite reductase, subunit B |
Gene: Shew_3156: Nitrite reductase, subunit B |
|
Gene: Spea_3967: Nitrite reductase, subunit B |
Gene: swp_4117: Nitrite reductase, subunit B |
Gene: Sputcn32_0313: Nitrite reductase, subunit B |
3
Shewanella sediminis HAW-EB3 Gene: Ssed_3563: Nitrite reductase, subunit B Gene: Ssed_0518: Nitrite reductase, subunit B Gene: Ssed_0241: Nitrite reductase, subunit B |
Gene: Shewana3_3962: Nitrite reductase, subunit B |
Gene: Shewmr4_3764: Nitrite reductase, subunit B |
Gene: Shewmr7_3837: Nitrite reductase, subunit B |
Gene: Sputw3181_3895: Nitrite reductase, subunit B |
Gene: Swoo_0240: Nitrite reductase, subunit B |
Nitrite reductase, subunit B |
| nrfC |
Gene: Sama_2903: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Sbal_0182: Nitrite reductase, 4Fe-4S ferredoxin subunit |
|
Gene: Sfri_0614: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Shal_0302: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Shew_3157: Nitrite reductase, 4Fe-4S ferredoxin subunit |
|
Gene: Spea_3966: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: swp_4116: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Sputcn32_0314: Nitrite reductase, 4Fe-4S ferredoxin subunit |
3
Shewanella sediminis HAW-EB3 Gene: Ssed_3562: Nitrite reductase, 4Fe-4S ferredoxin subunit Gene: Ssed_0517: Nitrite reductase, 4Fe-4S ferredoxin subunit Gene: Ssed_0242: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Shewana3_3961: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Shewmr4_3763: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Shewmr7_3836: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Sputw3181_3894: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Gene: Swoo_0241: Nitrite reductase, 4Fe-4S ferredoxin subunit |
Nitrite reductase, 4Fe-4S ferredoxin subunit |
| nrfD |
Gene: Sama_2904: Nitrite reductase, cytochrome c subunit |
Gene: Sbal_0183: Nitrite reductase, cytochrome c subunit |
|
Gene: Sfri_0613: Nitrite reductase, cytochrome c subunit |
Gene: Shal_0303: Nitrite reductase, cytochrome c subunit |
Gene: Shew_3158: Nitrite reductase, cytochrome c subunit |
Gene: SO4568: Nitrite reductase, cytochrome c subunit |
Gene: Spea_3965: Nitrite reductase, cytochrome c subunit |
Gene: swp_4115: Nitrite reductase, cytochrome c subunit |
Gene: Sputcn32_0315: Nitrite reductase, cytochrome c subunit |
3
Shewanella sediminis HAW-EB3 Gene: Ssed_3561: Nitrite reductase, cytochrome c subunit Gene: Ssed_0516: Nitrite reductase, cytochrome c subunit Gene: Ssed_0243: Nitrite reductase, cytochrome c subunit |
Gene: Shewana3_3960: Nitrite reductase, cytochrome c subunit |
Gene: Shewmr4_3762: Nitrite reductase, cytochrome c subunit |
Gene: Shewmr7_3835: Nitrite reductase, cytochrome c subunit |
Gene: Sputw3181_3893: Nitrite reductase, cytochrome c subunit |
Gene: Swoo_0242: Nitrite reductase, cytochrome c subunit |
Nitrite reductase, cytochrome c subunit |
| CRON 25. | |||||||||||||||||
| napD |
Gene: Sama_2982: Periplasmic nitrate reductase component NapD |
*
Shewanella baltica OS155 Site: position = -146 score = 4.66051 sequence = TTGATCCGGATCGA Gene: Sbal_3510: Periplasmic nitrate reductase component NapD |
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -241 score = 3.98447 sequence = TTAATGTAGCGCAA Site: position = -146 score = 4.08393 sequence = TTGATCTCGGTCTA Gene: Shal_0716: Periplasmic nitrate reductase component NapD |
*
Shewanella loihica PV-4 Site: position = -150 score = 4.66503 sequence = TTGATCTCGATCTA Gene: Shew_3205: Periplasmic nitrate reductase component NapD |
*
Shewanella oneidensis MR-1 Site: position = -146 score = 4.23392 sequence = TTGATCCCGATCGA Gene: SO0849: Periplasmic nitrate reductase component NapD |
*
Shewanella pealeana ATCC 700345 Site: position = -169 score = 4.89368 sequence = GTGAACTAGATCAA Site: position = -145 score = 4.08393 sequence = TTGATCTCGGTCTA Site: position = -240 score = 3.77351 sequence = TTAATATAGCGCAA Gene: Spea_0624: Periplasmic nitrate reductase component NapD |
*
Shewanella piezotolerans WP3 Site: position = -233 score = 3.98447 sequence = TTAATGTAGCGCAA Site: position = -138 score = 4.05127 sequence = TTGATCTTGGTCGA Gene: swp_4456: Periplasmic nitrate reductase component NapD |
*
Shewanella putrefaciens CN-32 Site: position = -143 score = 4.23392 sequence = TTGATCCCGATCGA Gene: Sputcn32_3147: Periplasmic nitrate reductase component NapD |
*
Shewanella sediminis HAW-EB3 Site: position = -159 score = 4.5022 sequence = ATGATCTCGATCTA Gene: Ssed_3956: Periplasmic nitrate reductase component NapD |
*
Shewanella sp ANA-3 Site: position = -145 score = 4.23392 sequence = TTGATCCCGATCGA Gene: Shewana3_3429: Periplasmic nitrate reductase component NapD |
*
Shewanella sp MR-4 Site: position = -145 score = 4.23392 sequence = TTGATCCCGATCGA Gene: Shewmr4_0705: Periplasmic nitrate reductase component NapD |
*
Shewanella sp MR-7 Site: position = -145 score = 4.23392 sequence = TTGATCCCGATCGA Gene: Shewmr7_3317: Periplasmic nitrate reductase component NapD |
*
Shewanella sp W3-18-1 Site: position = -143 score = 4.23392 sequence = TTGATCCCGATCGA Gene: Sputw3181_0796: Periplasmic nitrate reductase component NapD |
*
Shewanella woodyi ATCC 51908 Site: position = -151 score = 4.63237 sequence = TTGATCTTGATCGA Gene: Swoo_4109: Periplasmic nitrate reductase component NapD |
Periplasmic nitrate reductase component NapD |
| napA |
Gene: Sama_2983: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sbal_3511: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
Gene: Sfri_0553: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shal_0715: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shew_3206: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: SO0848: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Spea_0623: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: swp_4457: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sputcn32_3148: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Ssed_3957: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewana3_3430: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewmr4_0704: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Shewmr7_3318: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Sputw3181_0795: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: Swoo_4110: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
| napG |
Gene: Sama_2984: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
|
|
|
Gene: Shal_0714: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Shew_3207: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: SO0847: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Spea_0622: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
|
Gene: Sputcn32_3149: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Ssed_3958: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Shewana3_3431: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Shewmr4_0703: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Shewmr7_3319: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: Sputw3181_0794: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
|
Periplasmic nitrate reductase, ferredoxin-type protein NapG |
| napH |
Gene: Sama_2985: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
|
|
Gene: Shal_0713: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Shew_3208: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: SO0846: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Spea_0621: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
Gene: Sputcn32_3150: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Ssed_3959: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Shewana3_3432: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Shewmr4_0702: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Shewmr7_3320: Polyferredoxin NapH (periplasmic nitrate reductase) |
Gene: Sputw3181_0793: Polyferredoxin NapH (periplasmic nitrate reductase) |
|
Polyferredoxin NapH (periplasmic nitrate reductase) |
| napB |
Gene: Sama_2986: Nitrate reductase cytochrome c550-type subunit |
Gene: Sbal_3512: Nitrate reductase cytochrome c550-type subunit |
|
Gene: Sfri_0552: Nitrate reductase cytochrome c550-type subunit |
Gene: Shal_0712: Nitrate reductase cytochrome c550-type subunit |
Gene: Shew_3209: Nitrate reductase cytochrome c550-type subunit |
Gene: SO0845: Nitrate reductase cytochrome c550-type subunit |
Gene: Spea_0620: Nitrate reductase cytochrome c550-type subunit |
Gene: swp_4458: Nitrate reductase cytochrome c550-type subunit |
Gene: Sputcn32_3151: Nitrate reductase cytochrome c550-type subunit |
Gene: Ssed_3960: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewana3_3433: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewmr4_0701: Nitrate reductase cytochrome c550-type subunit |
Gene: Shewmr7_3321: Nitrate reductase cytochrome c550-type subunit |
Gene: Sputw3181_0792: Nitrate reductase cytochrome c550-type subunit |
Gene: Swoo_4111: Nitrate reductase cytochrome c550-type subunit |
Nitrate reductase cytochrome c550-type subunit |
| CRON 26. | |||||||||||||||||
| hupE |
2
Shewanella amazonensis SB2B Gene: Sama_3245: Predicted metal transporter Gene: Sama_3272: Predicted metal transporter |
*
Shewanella baltica OS155 Site: position = -82 score = 4.42593 sequence = GTGATTGAGATCAA Gene: Sbal_3991: Predicted metal transporter |
|
|
|
Gene: Shew_0327: Predicted metal transporter |
*
Shewanella oneidensis MR-1 Site: position = -91 score = 4.20032 sequence = GTGATAAGGATCAA Gene: SO4304: Predicted metal transporter |
|
*
Shewanella piezotolerans WP3 Site: position = -86 score = 4.88119 sequence = TTGATGTATATCAA Gene: swp_3063: Predicted metal transporter |
*
Shewanella putrefaciens CN-32 Site: position = -97 score = 4.25995 sequence = GTGATTAGGATCAA Gene: Sputcn32_3578: Predicted metal transporter |
*
Shewanella sediminis HAW-EB3 Site: position = -87 score = 4.81332 sequence = TTGATATGCATCAA Gene: Ssed_4125: Predicted metal transporter |
*
Shewanella sp ANA-3 Site: position = -93 score = 4.20032 sequence = GTGATAAGGATCAA Gene: Shewana3_0395: Predicted metal transporter |
*
Shewanella sp MR-4 Site: position = -91 score = 4.20032 sequence = GTGATAAGGATCAA Gene: Shewmr4_0396: Predicted metal transporter |
*
Shewanella sp MR-7 Site: position = -92 score = 4.20032 sequence = GTGATAAGGATCAA Gene: Shewmr7_3629: Predicted metal transporter |
*
Shewanella sp W3-18-1 Site: position = -97 score = 4.25995 sequence = GTGATTAGGATCAA Gene: Sputw3181_3717: Predicted metal transporter |
|
Predicted metal transporter |
| CRON 27. | |||||||||||||||||
| moaA |
*
Shewanella amazonensis SB2B Site: position = -145 score = 4.55282 sequence = ATGATCCAGACCAA Gene: Sama_3524: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella baltica OS155 Site: position = -152 score = 3.92491 sequence = GTGATCTAGGTTAA Gene: Sbal_0284: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Sden_0101: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Sfri_0082: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Shal_0122: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella loihica PV-4 Site: position = -154 score = 4.21077 sequence = TTGATCTTAAACAA Gene: Shew_0087: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella oneidensis MR-1 Site: position = -185 score = 4.51577 sequence = TTGAACCTGATCAA Gene: SO4452: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Spea_4120: Molybdenum cofactor biosynthesis protein MoaA |
Gene: swp_5009: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella putrefaciens CN-32 Site: position = -152 score = 4.46072 sequence = TTGATCTAGGCCAA Gene: Sputcn32_0389: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella sediminis HAW-EB3 Site: position = -186 score = 4.88291 sequence = TTGATCTTGAGCAA Gene: Ssed_4402: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella sp ANA-3 Site: position = -152 score = 4.65829 sequence = TTGAAGCGGATCAA Gene: Shewana3_0274: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella sp MR-4 Site: position = -152 score = 4.65829 sequence = TTGAAGCGGATCAA Gene: Shewmr4_0273: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella sp MR-7 Site: position = -152 score = 4.65829 sequence = TTGAAGCGGATCAA Gene: Shewmr7_3748: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella sp W3-18-1 Site: position = -152 score = 4.46072 sequence = TTGATCTAGGCCAA Gene: Sputw3181_0243: Molybdenum cofactor biosynthesis protein MoaA |
*
Shewanella woodyi ATCC 51908 Site: position = -187 score = 4.55673 sequence = TTGATCCTGAGCAA Gene: Swoo_4793: Molybdenum cofactor biosynthesis protein MoaA |
Molybdenum cofactor biosynthesis protein MoaA |
| moaB |
Gene: Sama_3525: Molybdenum cofactor biosynthesis protein MoaB |
|
|
|
Gene: Shal_0123: Molybdenum cofactor biosynthesis protein MoaB |
Gene: Shew_0088: Molybdenum cofactor biosynthesis protein MoaB |
|
Gene: Spea_4119: Molybdenum cofactor biosynthesis protein MoaB |
Gene: swp_5008: Molybdenum cofactor biosynthesis protein MoaB |
|
Gene: Ssed_4401: Molybdenum cofactor biosynthesis protein MoaB |
|
|
|
|
Gene: Swoo_4792: Molybdenum cofactor biosynthesis protein MoaB |
Molybdenum cofactor biosynthesis protein MoaB |
| moaC |
Gene: Sama_3526: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Sbal_0285: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Sden_0102: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Sfri_0083: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Shal_0124: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Shew_0089: Molybdenum cofactor biosynthesis protein MoaC |
Gene: SO4451: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Spea_4118: Molybdenum cofactor biosynthesis protein MoaC |
Gene: swp_5007: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Sputcn32_0390: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Ssed_4400: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Shewana3_0275: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Shewmr4_0274: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Shewmr7_3747: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Sputw3181_0244: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Swoo_4791: Molybdenum cofactor biosynthesis protein MoaC |
Molybdenum cofactor biosynthesis protein MoaC |
| moaD |
Gene: Sama_3527: Molybdenum cofactor biosynthesis protein D |
Gene: Sbal_0286: Molybdenum cofactor biosynthesis protein D |
Gene: Sden_0103: Molybdenum cofactor biosynthesis protein D |
Gene: Sfri_0084: Molybdenum cofactor biosynthesis protein D |
Gene: Shal_0125: Molybdenum cofactor biosynthesis protein D |
Gene: Shew_0090: Molybdenum cofactor biosynthesis protein D |
Gene: SO4450: Molybdenum cofactor biosynthesis protein D |
Gene: Spea_4117: Molybdenum cofactor biosynthesis protein D |
Gene: swp_5006: Molybdenum cofactor biosynthesis protein D |
Gene: Sputcn32_0391: Molybdenum cofactor biosynthesis protein D |
Gene: Ssed_4399: Molybdenum cofactor biosynthesis protein D |
Gene: Shewana3_0276: Molybdenum cofactor biosynthesis protein D |
Gene: Shewmr4_0275: Molybdenum cofactor biosynthesis protein D |
Gene: Shewmr7_3746: Molybdenum cofactor biosynthesis protein D |
Gene: Sputw3181_0245: Molybdenum cofactor biosynthesis protein D |
Gene: Swoo_4790: Molybdenum cofactor biosynthesis protein D |
Molybdenum cofactor biosynthesis protein D |
| moaE |
Gene: Sama_3528: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Sbal_0287: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Sden_0104: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Sfri_0085: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Shal_0126: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Shew_0091: Molybdenum cofactor biosynthesis protein MoaE |
Gene: SO4449: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Spea_4116: Molybdenum cofactor biosynthesis protein MoaE |
Gene: swp_5005: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Sputcn32_0392: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Ssed_4398: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Shewana3_0277: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Shewmr4_0276: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Shewmr7_3745: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Sputw3181_0246: Molybdenum cofactor biosynthesis protein MoaE |
Gene: Swoo_4789: Molybdenum cofactor biosynthesis protein MoaE |
Molybdenum cofactor biosynthesis protein MoaE |
| modA |
Gene: Sama_3529: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Sbal_0288: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Sden_0105: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Sfri_0086: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Shal_0127: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Shew_0092: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: SO4448: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Spea_4115: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: swp_5004: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Sputcn32_0393: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Ssed_4397: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Shewana3_0278: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Shewmr4_0277: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Shewmr7_3744: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Sputw3181_0247: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Swoo_4788: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
| modB |
Gene: Sama_3530: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Sbal_0289: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Sden_0106: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Sfri_0087: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Shal_0128: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Shew_0093: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: SO4447: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Spea_4114: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: swp_5002: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Sputcn32_0394: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Ssed_4396: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Shewana3_0279: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Shewmr4_0278: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Shewmr7_3743: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Sputw3181_0248: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Swoo_4787: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
| modC |
Gene: Sama_3531: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Sbal_0290: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Sden_0107: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Sfri_0088: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Shal_0129: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Shew_0094: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: SO4446: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Spea_4113: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: swp_5001: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Sputcn32_0395: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Ssed_4395: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Shewana3_0280: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Shewmr4_0279: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Shewmr7_3742: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Sputw3181_0249: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Swoo_4786: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
| CRON 28. | |||||||||||||||||
| mtrD |
*
Shewanella amazonensis SB2B Site: position = -377 score = 3.83142 sequence = TTAATCTCAATCAT Gene: Sama_1213: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella baltica OS155 Site: position = -362 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Sbal_1593: Periplasmic decaheme cytochrome c, MtrD |
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -363 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Shal_2778: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella loihica PV-4 Site: position = -318 score = 4.85043 sequence = TTTATCTAGATCAA Site: position = -166 score = 4.62641 sequence = GTGATCTAGATCAC Gene: Shew_2519: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella oneidensis MR-1 Site: position = -397 score = 4.23451 sequence = TTTACCTAGATCAA Gene: SO1782: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella pealeana ATCC 700345 Site: position = -344 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Spea_2692: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella piezotolerans WP3 Site: position = -366 score = 4.85043 sequence = TTTATCTAGATCAA Site: position = -181 score = 3.79868 sequence = GTGACGTAGATCAC Gene: swp_3272: Periplasmic decaheme cytochrome c, MtrD |
|
*
Shewanella sediminis HAW-EB3 Site: position = -349 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Ssed_1530: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella sp ANA-3 Site: position = -353 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Shewana3_2672: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella sp MR-4 Site: position = -353 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Shewmr4_2506: Periplasmic decaheme cytochrome c, MtrD |
*
Shewanella sp MR-7 Site: position = -353 score = 4.23451 sequence = TTTACCTAGATCAA Gene: Shewmr7_2574: Periplasmic decaheme cytochrome c, MtrD |
|
|
Periplasmic decaheme cytochrome c, MtrD |
| mtrE |
Gene: Sama_1212: Outer membrane protein, MtrE |
Gene: Sbal_1592: Outer membrane protein, MtrE |
|
|
Gene: Shal_2779: Outer membrane protein, MtrE |
Gene: Shew_2520: Outer membrane protein, MtrE |
Gene: SO1781: Outer membrane protein, MtrE |
Gene: Spea_2693: Outer membrane protein, MtrE |
Gene: swp_3273: Outer membrane protein, MtrE |
|
Gene: Ssed_1529: Outer membrane protein, MtrE |
Gene: Shewana3_2673: Outer membrane protein, MtrE |
Gene: Shewmr4_2507: Outer membrane protein, MtrE |
Gene: Shewmr7_2575: Outer membrane protein, MtrE |
|
|
Outer membrane protein, MtrE |
| mtrF |
Gene: Sama_1211: Decaheme cytochrome c, MtrF |
Gene: Sbal_1591: Decaheme cytochrome c, MtrF |
|
|
Gene: Shal_2780: Decaheme cytochrome c, MtrF |
Gene: Shew_2521: Decaheme cytochrome c, MtrF |
Gene: SO1780: Decaheme cytochrome c, MtrF |
Gene: Spea_2694: Decaheme cytochrome c, MtrF |
Gene: swp_3274: Decaheme cytochrome c, MtrF |
|
Gene: Ssed_1528: Decaheme cytochrome c, MtrF |
Gene: Shewana3_2674: Decaheme cytochrome c, MtrF |
Gene: Shewmr4_2508: Decaheme cytochrome c, MtrF |
Gene: Shewmr7_2576: Decaheme cytochrome c, MtrF |
|
|
Decaheme cytochrome c, MtrF |
| CRON 29. | |||||||||||||||||
| cydD |
*
Shewanella amazonensis SB2B Site: position = -133 score = 4.65028 sequence = TTGATCCAGCGCAA Gene: Sama_2679: Transport ATP-binding protein CydD |
Gene: Sbal_3463: Transport ATP-binding protein CydD |
*
Shewanella denitrificans OS217 Site: position = -222 score = 4.36946 sequence = CTGAGCTAAATCAA Gene: Sden_0860: Transport ATP-binding protein CydD |
Gene: Sfri_3213: Transport ATP-binding protein CydD |
*
Shewanella halifaxensis HAW-EB4 Site: position = -229 score = 5.32799 sequence = TTGATCTAGCTCAA Gene: Shal_3589: Transport ATP-binding protein CydD |
*
Shewanella loihica PV-4 Site: position = -125 score = 5.32799 sequence = TTGATCTAGCTCAA Gene: Shew_0613: Transport ATP-binding protein CydD |
Gene: SO3780: Transport ATP-binding protein CydD |
*
Shewanella pealeana ATCC 700345 Site: position = -181 score = 5.32799 sequence = TTGATCTAGCTCAA Gene: Spea_3494: Transport ATP-binding protein CydD |
Gene: swp_0805: Transport ATP-binding protein CydD |
Gene: Sputcn32_3106: Transport ATP-binding protein CydD |
*
Shewanella sediminis HAW-EB3 Site: position = -135 score = 5.32799 sequence = TTGATCTAGCTCAA Gene: Ssed_3849: Transport ATP-binding protein CydD |
Gene: Shewana3_0812: Transport ATP-binding protein CydD |
Gene: Shewmr4_3127: Transport ATP-binding protein CydD |
Gene: Shewmr7_0840: Transport ATP-binding protein CydD |
Gene: Sputw3181_0838: Transport ATP-binding protein CydD |
*
Shewanella woodyi ATCC 51908 Site: position = -145 score = 5.32799 sequence = TTGATCTAGCTCAA Gene: Swoo_0710: Transport ATP-binding protein CydD |
Transport ATP-binding protein CydD |
| cydC |
Gene: Sama_2678: Transport ATP-binding protein CydC |
Gene: Sbal_3462: Transport ATP-binding protein CydC |
Gene: Sden_0859: Transport ATP-binding protein CydC |
Gene: Sfri_3212: Transport ATP-binding protein CydC |
Gene: Shal_3588: Transport ATP-binding protein CydC |
Gene: Shew_0614: Transport ATP-binding protein CydC |
Gene: SO3779: Transport ATP-binding protein CydC |
Gene: Spea_3493: Transport ATP-binding protein CydC |
Gene: swp_0806: Transport ATP-binding protein CydC |
Gene: Sputcn32_3105: Transport ATP-binding protein CydC |
Gene: Ssed_3848: Transport ATP-binding protein CydC |
Gene: Shewana3_0813: Transport ATP-binding protein CydC |
Gene: Shewmr4_3126: Transport ATP-binding protein CydC |
Gene: Shewmr7_0841: Transport ATP-binding protein CydC |
Gene: Sputw3181_0839: Transport ATP-binding protein CydC |
Gene: Swoo_0711: Transport ATP-binding protein CydC |
Transport ATP-binding protein CydC |
| CRON 30. | |||||||||||||||||
| narQ |
*
Shewanella amazonensis SB2B Site: position = -131 score = 4.1861 sequence = TTGCACAAGATCAA Gene: Sama_0647: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella baltica OS155 Site: position = -117 score = 4.86133 sequence = TTGCGCTAGATCAA Gene: Sbal_0793: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -159 score = 4.53515 sequence = TTGCGCCAGATCAA Gene: Sfri_0621: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -130 score = 4.64953 sequence = TTGCGGTAGATCAA Gene: Shal_0885: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella loihica PV-4 Site: position = -132 score = 4.54611 sequence = TTGAGGCAGATCAT Gene: Shew_0843: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella oneidensis MR-1 Site: position = -170 score = 4.86133 sequence = TTGCGCTAGATCAA Gene: SO3981: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella pealeana ATCC 700345 Site: position = -128 score = 4.64953 sequence = TTGCGGTAGATCAA Gene: Spea_0830: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
Gene: swp_3960: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella putrefaciens CN-32 Site: position = -133 score = 4.53515 sequence = TTGCGCCAGATCAA Gene: Sputcn32_0684: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella sediminis HAW-EB3 Site: position = -132 score = 4.48671 sequence = ATGCGGTAGATCAA Gene: Ssed_0930: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella sp ANA-3 Site: position = -134 score = 4.86133 sequence = TTGCGCTAGATCAA Gene: Shewana3_0657: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella sp MR-4 Site: position = -135 score = 4.86133 sequence = TTGCGCTAGATCAA Gene: Shewmr4_0658: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella sp MR-7 Site: position = -135 score = 4.86133 sequence = TTGCGCTAGATCAA Gene: Shewmr7_3364: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella sp W3-18-1 Site: position = -133 score = 4.53515 sequence = TTGCGCCAGATCAA Gene: Sputw3181_3487: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
*
Shewanella woodyi ATCC 51908 Site: position = -131 score = 4.64953 sequence = TTGCGGTAGATCAA Gene: Swoo_0971: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-) |
| narP |
Gene: Sama_0646: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Sbal_0792: Nitrate/nitrite response regulator protein NarP, LuxR family |
|
Gene: Sfri_0620: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Shal_0884: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Shew_0842: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: SO3982: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Spea_0829: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: swp_3961: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Sputcn32_0683: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Ssed_0929: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Shewana3_0656: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Shewmr4_0657: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Shewmr7_3365: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Sputw3181_3488: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Swoo_0970: Nitrate/nitrite response regulator protein NarP, LuxR family |
Nitrate/nitrite response regulator protein NarP, LuxR family |
| CRON 31. | |||||||||||||||||
| narX |
|
|
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -209 score = 4.80668 sequence = TTGACCTAGATCAT Gene: Shal_0175: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
|
|
|
|
*
Shewanella sediminis HAW-EB3 Site: position = -201 score = 5.09643 sequence = TTGATCCAGATCAT Site: position = -171 score = 3.84496 sequence = TTGCACTAGCTCAC Gene: Ssed_1952: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Shewanella sp MR-4 Site: position = -341 score = 5.07623 sequence = TTGATGTAAATCAA Gene: Shewmr4_2224: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Shewanella sp MR-7 Site: position = -341 score = 5.07623 sequence = TTGATGTAAATCAA Gene: Shewmr7_2300: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Shewanella woodyi ATCC 51908 Site: position = -223 score = 5.09643 sequence = TTGATCCAGATCAT Gene: Swoo_2636: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
| narL |
|
|
|
|
Gene: Shal_0174: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
|
|
|
|
Gene: Ssed_1951: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: Shewmr4_2223: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: Shewmr7_2299: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: Swoo_2637: Nitrate/nitrite response regulator protein NarL, LuxR family |
Nitrate/nitrite response regulator protein NarL, LuxR family |
| CRON 32. | |||||||||||||||||
| nqrA1 |
*
Shewanella amazonensis SB2B Site: position = -256 score = 4.38218 sequence = GTGATCTGGCGCAT Gene: Sama_2981: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Sbal_0754: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
|
Gene: Sfri_3211: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Shal_1644: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Shew_2709: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: SO0902: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Spea_1573: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: swp_2889: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Sputcn32_0849: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Ssed_3582: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Shewana3_3378: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
*
Shewanella sp MR-4 Site: position = -145 score = 4.53724 sequence = TTGATGTGAATCTA Gene: Shewmr4_0748: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
*
Shewanella sp MR-7 Site: position = -145 score = 4.26548 sequence = TTGATGTGAATCCA Gene: Shewmr7_3272: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Sputw3181_3324: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Gene: Swoo_3405: Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit A (EC 1.6.5.-) |
| nqrB1 |
Gene: Sama_2980: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Sbal_0755: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
|
Gene: Sfri_3210: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Shal_1645: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Shew_2708: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: SO0903: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Spea_1574: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: swp_2888: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Sputcn32_0850: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Ssed_3581: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Shewana3_3377: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Shewmr4_0749: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Shewmr7_3271: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Sputw3181_3323: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Gene: Swoo_3404: Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit B (EC 1.6.5.-) |
| nqrC1 |
Gene: Sama_2979: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Sbal_0756: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
|
Gene: Sfri_3209: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Shal_1646: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Shew_2707: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: SO0904: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Spea_1575: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: swp_2886: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Sputcn32_0851: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Ssed_3580: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Shewana3_3376: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Shewmr4_0750: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Shewmr7_3270: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Sputw3181_3322: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Gene: Swoo_3403: Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit C (EC 1.6.5.-) |
| nqrD1 |
Gene: Sama_2978: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Sbal_0757: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
|
Gene: Sfri_3208: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Shal_1647: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Shew_2706: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: SO0905: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Spea_1576: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: swp_2885: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Sputcn32_0852: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Ssed_3579: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Shewana3_3375: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Shewmr4_0751: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Shewmr7_3269: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Sputw3181_3321: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Gene: Swoo_3402: Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit D (EC 1.6.5.-) |
| nqrE1 |
Gene: Sama_2977: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Sbal_0758: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
|
Gene: Sfri_3207: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Shal_1648: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Shew_2705: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: SO0906: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Spea_1577: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: swp_2884: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Sputcn32_0853: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Ssed_3578: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Shewana3_3374: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Shewmr4_0752: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Shewmr7_3268: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Sputw3181_3320: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Gene: Swoo_3401: Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit E (EC 1.6.5.-) |
| nqrF1 |
Gene: Sama_2976: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Sbal_0759: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
|
Gene: Sfri_3206: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Shal_1649: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Shew_2704: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: SO0907: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Spea_1578: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: swp_2883: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Sputcn32_0854: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Ssed_3577: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Shewana3_3373: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Shewmr4_0753: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Shewmr7_3267: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Sputw3181_3319: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Gene: Swoo_3400: Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
Na(+)-translocating NADH-quinone reductase, subunit F (EC 1.6.5.-) |
| CRON 33. | |||||||||||||||||
| fdhX2 |
*
Shewanella amazonensis SB2B Site: position = -148 score = 3.9551 sequence = CTGCGCCAGATCAA Gene: Sama_3610: Formate dehydrogenase, subunit or accessory protein |
Gene: Sbal_4139: Formate dehydrogenase, subunit or accessory protein |
|
|
*2
Shewanella halifaxensis HAW-EB4 Site: position = -199 score = 3.90723 sequence = CTAATTTAGATCAA Gene: Shal_0108: Formate dehydrogenase, subunit or accessory protein Site: position = -199 score = 3.94101 sequence = CAGATTTGGATCAA Gene: Shal_0112: Formate dehydrogenase, subunit or accessory protein |
Gene: Shew_0062: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella oneidensis MR-1 Site: position = -184 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: SO4512: Formate dehydrogenase, subunit or accessory protein |
*2
Shewanella pealeana ATCC 700345 Gene: Spea_4134: Formate dehydrogenase, subunit or accessory protein Site: position = -199 score = 3.90833 sequence = CGGATTTAGATCAA Gene: Spea_4130: Formate dehydrogenase, subunit or accessory protein |
Gene: swp_5026: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella putrefaciens CN-32 Site: position = -184 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: Sputcn32_0334: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella sediminis HAW-EB3 Site: position = -200 score = 4.48839 sequence = TGGATTTAGATCAA Gene: Ssed_4418: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella sp ANA-3 Site: position = -182 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: Shewana3_3919: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella sp MR-4 Site: position = -182 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: Shewmr4_3723: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella sp MR-7 Site: position = -182 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: Shewmr7_3794: Formate dehydrogenase, subunit or accessory protein |
*
Shewanella sp W3-18-1 Site: position = -185 score = 4.28281 sequence = CTGTTCTAGATCAA Gene: Sputw3181_3874: Formate dehydrogenase, subunit or accessory protein |
Gene: Swoo_4810: Formate dehydrogenase, subunit or accessory protein |
Formate dehydrogenase, subunit or accessory protein |
| fdhA2 |
Gene: Sama_3609: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sbal_4140: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
|
|
2
Shewanella halifaxensis HAW-EB4 Gene: Shal_0109: Formate dehydrogenase, major subunit (EC 1.2.1.2) Gene: Shal_0113: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shew_0063: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: SO4513: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
2
Shewanella pealeana ATCC 700345 Gene: Spea_4133: Formate dehydrogenase, major subunit (EC 1.2.1.2) Gene: Spea_4129: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: swp_5025: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sputcn32_0333: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Ssed_4417: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewana3_3920: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewmr4_3724: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewmr7_3795: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sputw3181_3875: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Swoo_4809: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Formate dehydrogenase, major subunit (EC 1.2.1.2) |
| fdhB2 |
Gene: Sama_3608: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sbal_4141: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
|
|
2
Shewanella halifaxensis HAW-EB4 Gene: Shal_0110: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) Gene: Shal_0114: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shew_0064: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: SO4514: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
2
Shewanella pealeana ATCC 700345 Gene: Spea_4132: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) Gene: Spea_4128: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: swp_5024: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sputcn32_0332: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Ssed_4416: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewana3_3921: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewmr4_3725: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewmr7_3796: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sputw3181_3876: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Swoo_4808: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
| fdhC2 |
Gene: Sama_3607: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Sbal_4142: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
|
|
2
Shewanella halifaxensis HAW-EB4 Gene: Shal_0111: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) Gene: Shal_0115: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Shew_0065: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: SO4515: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
2
Shewanella pealeana ATCC 700345 Gene: Spea_4131: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) Gene: Spea_4127: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: swp_5023: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Sputcn32_0331: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
|
Gene: Shewana3_3922: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Shewmr4_3726: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Shewmr7_3797: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Sputw3181_3877: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Gene: Swoo_4807: Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
Formate dehydrogenase, gamma subunit (EC 1.2.1.2) |
| CRON 34. | |||||||||||||||||
| nrfA |
*
Shewanella amazonensis SB2B Site: position = -128 score = 4.26166 sequence = TTGATCTTGTGCAA Gene: Sama_0648: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella baltica OS155 Site: position = -122 score = 4.97645 sequence = TTGATCTAGCGCAA Gene: Sbal_0794: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -138 score = 4.93461 sequence = TTGATCTGGCGCAA Gene: Sfri_0622: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -125 score = 4.62378 sequence = TTGATCTACCGCAA Gene: Shal_0886: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella loihica PV-4 Site: position = -129 score = 4.77065 sequence = ATGATCTGCCTCAA Gene: Shew_0844: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella oneidensis MR-1 Site: position = -122 score = 4.97645 sequence = TTGATCTAGCGCAA Gene: SO3980: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella pealeana ATCC 700345 Site: position = -128 score = 4.62378 sequence = TTGATCTACCGCAA Gene: Spea_0831: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella piezotolerans WP3 Site: position = -123 score = 4.63387 sequence = TTGATCTAACGCAA Gene: swp_3958: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella putrefaciens CN-32 Site: position = -122 score = 4.93461 sequence = TTGATCTGGCGCAA Gene: Sputcn32_0685: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella sediminis HAW-EB3 Site: position = -127 score = 4.41577 sequence = TTGATCTACCGCAT Gene: Ssed_0931: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella sp ANA-3 Site: position = -104 score = 4.97645 sequence = TTGATCTAGCGCAA Gene: Shewana3_0658: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella sp MR-4 Site: position = -104 score = 4.97645 sequence = TTGATCTAGCGCAA Gene: Shewmr4_0659: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella sp MR-7 Site: position = -104 score = 4.97645 sequence = TTGATCTAGCGCAA Gene: Shewmr7_3363: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella sp W3-18-1 Site: position = -122 score = 4.93461 sequence = TTGATCTGGCGCAA Gene: Sputw3181_3486: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
*
Shewanella woodyi ATCC 51908 Site: position = -127 score = 4.62378 sequence = TTGATCTACCGCAA Gene: Swoo_0972: Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
Nitrite reductase, cytochrome c(552) (EC 1.7.2.2) |
| CRON 35. | |||||||||||||||||
| fdhD |
*
Shewanella amazonensis SB2B Site: position = -182 score = 4.77646 sequence = TTGAAGTGGATCAT Gene: Sama_3619: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella baltica OS155 Site: position = -183 score = 5.0301 sequence = TTGAACTAGATCAT Gene: Sbal_4130: Formate dehydrogenase chain D (EC 1.2.1.2) |
|
Gene: Sfri_0051: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -177 score = 5.23811 sequence = TTGAACTAGATCAA Gene: Shal_0099: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella loihica PV-4 Site: position = -186 score = 4.98826 sequence = TTGAACTGGATCAT Gene: Shew_0053: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella oneidensis MR-1 Site: position = -330 score = 4.77646 sequence = TTGAAGTGGATCAT Gene: SO4503: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella pealeana ATCC 700345 Site: position = -179 score = 5.23811 sequence = TTGAACTAGATCAA Gene: Spea_4143: Formate dehydrogenase chain D (EC 1.2.1.2) |
Gene: swp_5036: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella putrefaciens CN-32 Site: position = -183 score = 4.8183 sequence = TTGAAGTAGATCAT Gene: Sputcn32_0343: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella sediminis HAW-EB3 Site: position = -149 score = 5.04224 sequence = TTGAGCTGGATCAT Gene: Ssed_4427: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella sp ANA-3 Site: position = -183 score = 4.83044 sequence = TTGAGGTGGATCAT Gene: Shewana3_3910: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella sp MR-4 Site: position = -183 score = 4.83044 sequence = TTGAGGTGGATCAT Gene: Shewmr4_3714: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella sp MR-7 Site: position = -183 score = 4.83044 sequence = TTGAGGTGGATCAT Gene: Shewmr7_3785: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella sp W3-18-1 Site: position = -127 score = 4.8183 sequence = TTGAAGTAGATCAT Gene: Sputw3181_3865: Formate dehydrogenase chain D (EC 1.2.1.2) |
*
Shewanella woodyi ATCC 51908 Site: position = -159 score = 5.08408 sequence = TTGAGCTAGATCAT Gene: Swoo_4819: Formate dehydrogenase chain D (EC 1.2.1.2) |
Formate dehydrogenase chain D (EC 1.2.1.2) |
| SO4502 |
Gene: Sama_3620: Conserved hupothetical protein |
Gene: Sbal_4129: Conserved hupothetical protein |
|
|
Gene: Shal_0098: Conserved hupothetical protein |
Gene: Shew_0052: Conserved hupothetical protein |
Gene: SO4502: Conserved hupothetical protein |
Gene: Spea_4144: Conserved hupothetical protein |
Gene: swp_5037: Conserved hupothetical protein |
Gene: Sputcn32_0344: Conserved hupothetical protein |
Gene: Ssed_4428: Conserved hupothetical protein |
Gene: Shewana3_3909: Conserved hupothetical protein |
Gene: Shewmr4_3713: Conserved hupothetical protein |
Gene: Shewmr7_3784: Conserved hupothetical protein |
Gene: Sputw3181_3864: Conserved hupothetical protein |
Gene: Swoo_4820: Conserved hupothetical protein |
Conserved hupothetical protein |
| CRON 36. | |||||||||||||||||
| frdC2 |
Gene: Sama_3222: Fumarate reductase, cytochrome b subunit |
Gene: Sbal_3937: Fumarate reductase, cytochrome b subunit |
|
Gene: Sfri_0456: Fumarate reductase, cytochrome b subunit |
*
Shewanella halifaxensis HAW-EB4 Site: position = -134 score = 3.85526 sequence = GTGATCTACGTCTA Gene: Shal_3899: Fumarate reductase, cytochrome b subunit |
*
Shewanella loihica PV-4 Site: position = -122 score = 3.8553 sequence = GTGATCGACGTCAA Gene: Shew_0332: Fumarate reductase, cytochrome b subunit |
Gene: SO0396: Fumarate reductase, cytochrome b subunit |
*
Shewanella pealeana ATCC 700345 Site: position = -134 score = 4.39287 sequence = GTGATCTTGATCTA Gene: Spea_0392: Fumarate reductase, cytochrome b subunit |
*
Shewanella piezotolerans WP3 Site: position = -134 score = 4.09025 sequence = GTGATCTTGCTCTA Gene: swp_0428: Fumarate reductase, cytochrome b subunit |
*
Shewanella putrefaciens CN-32 Site: position = -108 score = 3.77348 sequence = GTGAGGTAGCTCAC Gene: Sputcn32_3441: Fumarate reductase, cytochrome b subunit |
*
Shewanella sediminis HAW-EB3 Site: position = -122 score = 4.27042 sequence = GTGATCTGCTTCAA Gene: Ssed_4116: Fumarate reductase, cytochrome b subunit |
Gene: Shewana3_0401: Fumarate reductase, cytochrome b subunit |
Gene: Shewmr4_0402: Fumarate reductase, cytochrome b subunit |
Gene: Shewmr7_3623: Fumarate reductase, cytochrome b subunit |
*
Shewanella sp W3-18-1 Site: position = -108 score = 3.77348 sequence = GTGAGGTAGCTCAC Gene: Sputw3181_0498: Fumarate reductase, cytochrome b subunit |
*
Shewanella woodyi ATCC 51908 Site: position = -134 score = 4.41129 sequence = GTGATGTGGTTCAA Gene: Swoo_0507: Fumarate reductase, cytochrome b subunit |
Fumarate reductase, cytochrome b subunit |
| frdC1 |
Gene: Sama_3221: Fumarate reductase, cytochrome b subunit |
*2
Shewanella baltica OS155 Site: position = -101 score = 4.62638 sequence = TTGATCTGGCTCAC Gene: Sbal_3936: Fumarate reductase, cytochrome b subunit Site: position = -79 score = 4.31144 sequence = TTAATCTGGATCTA Gene: Sbal_3749: Fumarate reductase, cytochrome b subunit |
|
|
Gene: Shal_3898: Fumarate reductase, cytochrome b subunit |
Gene: Shew_0333: Fumarate reductase, cytochrome b subunit |
*
Shewanella oneidensis MR-1 Site: position = -105 score = 4.25112 sequence = TTGATCTAACTCAG Gene: SO0397: Fumarate reductase, cytochrome b subunit |
Gene: Spea_0393: Fumarate reductase, cytochrome b subunit |
Gene: swp_0429: Fumarate reductase, cytochrome b subunit |
Gene: Sputcn32_3440: Fumarate reductase, cytochrome b subunit |
*
Shewanella sediminis HAW-EB3 Site: position = -100 score = 4.2737 sequence = TTGATCTGCCTCAC Gene: Ssed_4115: Fumarate reductase, cytochrome b subunit |
*
Shewanella sp ANA-3 Site: position = -103 score = 4.25112 sequence = TTGATCTAACTCAG Gene: Shewana3_0402: Fumarate reductase, cytochrome b subunit |
*
Shewanella sp MR-4 Site: position = -103 score = 4.25112 sequence = TTGATCTAACTCAG Gene: Shewmr4_0403: Fumarate reductase, cytochrome b subunit |
*
Shewanella sp MR-7 Site: position = -102 score = 4.25112 sequence = TTGATCTAACTCAG Gene: Shewmr7_3622: Fumarate reductase, cytochrome b subunit |
Gene: Sputw3181_0499: Fumarate reductase, cytochrome b subunit |
Gene: Swoo_0508: Fumarate reductase, cytochrome b subunit |
Fumarate reductase, cytochrome b subunit |
| frdA |
Gene: Sama_3220: Fumarate reductase, flavoprotein subunit |
2
Shewanella baltica OS155 Gene: Sbal_3935: Fumarate reductase, flavoprotein subunit Gene: Sbal_3750: Fumarate reductase, flavoprotein subunit |
|
*2
Shewanella frigidimarina NCIMB 400 Site: position = -31 score = 4.4796 sequence = ATTATCTAGATCAT Gene: Sfri_0679: Fumarate reductase, flavoprotein subunit Gene: Sfri_0457: Fumarate reductase, flavoprotein subunit |
Gene: Shal_3897: Fumarate reductase, flavoprotein subunit |
Gene: Shew_0334: Fumarate reductase, flavoprotein subunit |
Gene: SO0398: Fumarate reductase, flavoprotein subunit |
Gene: Spea_0394: Fumarate reductase, flavoprotein subunit |
Gene: swp_0430: Fumarate reductase, flavoprotein subunit |
Gene: Sputcn32_3439: Fumarate reductase, flavoprotein subunit |
Gene: Ssed_4114: Fumarate reductase, flavoprotein subunit |
Gene: Shewana3_0403: Fumarate reductase, flavoprotein subunit |
Gene: Shewmr4_0404: Fumarate reductase, flavoprotein subunit |
Gene: Shewmr7_3621: Fumarate reductase, flavoprotein subunit |
Gene: Sputw3181_0500: Fumarate reductase, flavoprotein subunit |
Gene: Swoo_0509: Fumarate reductase, flavoprotein subunit |
Fumarate reductase, flavoprotein subunit |
| frdB |
Gene: Sama_3219: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
2
Shewanella baltica OS155 Gene: Sbal_3934: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) Gene: Sbal_3751: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
|
2
Shewanella frigidimarina NCIMB 400 Gene: Sfri_0678: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) Gene: Sfri_0458: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Shal_3896: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Shew_0335: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: SO0399: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Spea_0395: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: swp_0431: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Sputcn32_3438: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Ssed_4113: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Shewana3_0404: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Shewmr4_0405: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Shewmr7_3620: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Sputw3181_0501: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Gene: Swoo_0510: Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
Fumarate reductase, iron-sulfur protein (EC 1.3.99.1) |
| CRON 37. | |||||||||||||||||
| bfr2 |
*
Shewanella amazonensis SB2B Site: position = -41 score = 5.41881 sequence = TTGATGTAGATCAA Gene: Sama_2530: Bacterioferritin |
*
Shewanella baltica OS155 Site: position = -44 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Sbal_0932: Bacterioferritin |
*
Shewanella denitrificans OS217 Site: position = -36 score = 4.56585 sequence = TTGATTTGGATCAC Gene: Sden_0990: Bacterioferritin |
*
Shewanella frigidimarina NCIMB 400 Site: position = -37 score = 4.47372 sequence = TTGATCGAGATCAC Gene: Sfri_0957: Bacterioferritin |
*
Shewanella halifaxensis HAW-EB4 Site: position = -33 score = 5.20784 sequence = TTGATATAGATCAA Gene: Shal_3179: Bacterioferritin |
*
Shewanella loihica PV-4 Site: position = -33 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Shew_2873: Bacterioferritin |
*
Shewanella oneidensis MR-1 Site: position = -43 score = 5.26747 sequence = TTGATTTAGATCAA Gene: SO1111: Bacterioferritin |
*
Shewanella pealeana ATCC 700345 Site: position = -33 score = 5.20784 sequence = TTGATATAGATCAA Gene: Spea_3095: Bacterioferritin |
*
Shewanella piezotolerans WP3 Site: position = -35 score = 5.20784 sequence = TTGATATAGATCAA Gene: swp_1175: Bacterioferritin |
*
Shewanella putrefaciens CN-32 Site: position = -44 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Sputcn32_0948: Bacterioferritin |
*
Shewanella sediminis HAW-EB3 Site: position = -31 score = 5.20784 sequence = TTGATATAGATCAA Gene: Ssed_2230: Bacterioferritin |
*
Shewanella sp ANA-3 Site: position = -43 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Shewana3_0946: Bacterioferritin |
*
Shewanella sp MR-4 Site: position = -42 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Shewmr4_0944: Bacterioferritin |
*
Shewanella sp MR-7 Site: position = -43 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Shewmr7_0982: Bacterioferritin |
*
Shewanella sp W3-18-1 Site: position = -44 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Sputw3181_3228: Bacterioferritin |
*
Shewanella woodyi ATCC 51908 Site: position = -85 score = 5.41881 sequence = TTGATGTAGATCAA Gene: Swoo_3608: Bacterioferritin |
Bacterioferritin |
| bfr1 |
Gene: Sama_2529: Bacterioferritin |
Gene: Sbal_0933: Bacterioferritin |
Gene: Sden_0991: Bacterioferritin |
Gene: Sfri_0958: Bacterioferritin |
Gene: Shal_3178: Bacterioferritin |
Gene: Shew_2872: Bacterioferritin |
Gene: SO1112: Bacterioferritin |
Gene: Spea_3094: Bacterioferritin |
Gene: swp_1176: Bacterioferritin |
Gene: Sputcn32_0949: Bacterioferritin |
Gene: Ssed_2231: Bacterioferritin |
Gene: Shewana3_0947: Bacterioferritin |
Gene: Shewmr4_0945: Bacterioferritin |
Gene: Shewmr7_0983: Bacterioferritin |
Gene: Sputw3181_3227: Bacterioferritin |
Gene: Swoo_3607: Bacterioferritin |
Bacterioferritin |
| CRON 38. | |||||||||||||||||
| pykA |
*
Shewanella amazonensis SB2B Site: position = -96 score = 4.66131 sequence = TTGAGATAGATCAT Gene: Sama_1814: Pyruvate kinase (EC 2.7.1.40) |
2
Shewanella baltica OS155 Gene: Sbal_2243: Pyruvate kinase (EC 2.7.1.40) Gene: Sbal_4529: Pyruvate kinase (EC 2.7.1.40) |
Gene: Sden_2081: Pyruvate kinase (EC 2.7.1.40) |
Gene: Sfri_1890: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -95 score = 4.72094 sequence = TTGAGTTAGATCAT Gene: Shal_1947: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella loihica PV-4 Site: position = -94 score = 4.66131 sequence = TTGAGATAGATCAT Gene: Shew_2050: Pyruvate kinase (EC 2.7.1.40) |
Gene: SO2491: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella pealeana ATCC 700345 Site: position = -95 score = 4.72094 sequence = TTGAGTTAGATCAT Gene: Spea_2337: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella piezotolerans WP3 Site: position = -95 score = 4.66131 sequence = TTGAGATAGATCAT Gene: swp_2388: Pyruvate kinase (EC 2.7.1.40) |
Gene: Sputcn32_1864: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella sediminis HAW-EB3 Site: position = -95 score = 4.65332 sequence = TTGCGCTAGATCAT Gene: Ssed_2068: Pyruvate kinase (EC 2.7.1.40) |
Gene: Shewana3_2153: Pyruvate kinase (EC 2.7.1.40) |
Gene: Shewmr4_2048: Pyruvate kinase (EC 2.7.1.40) |
Gene: Shewmr7_1927: Pyruvate kinase (EC 2.7.1.40) |
Gene: Sputw3181_2144: Pyruvate kinase (EC 2.7.1.40) |
*
Shewanella woodyi ATCC 51908 Site: position = -95 score = 4.65332 sequence = TTGCGCTAGATCAT Gene: Swoo_2541: Pyruvate kinase (EC 2.7.1.40) |
Pyruvate kinase (EC 2.7.1.40) |
| CRON 39. | |||||||||||||||||
| ompW |
*
Shewanella amazonensis SB2B Site: position = -105 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Sama_1371: Outer membrane protein W precursor |
*
Shewanella baltica OS155 Site: position = -103 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Sbal_1490: Outer membrane protein W precursor |
*
Shewanella denitrificans OS217 Site: position = -103 score = 5.30443 sequence = TTGATCCAGATCAA Site: position = -153 score = 4.53054 sequence = GTGAATTAGATCAA Gene: Sden_2589: Outer membrane protein W precursor |
*
Shewanella frigidimarina NCIMB 400 Site: position = -166 score = 4.61743 sequence = GTGATCCAAATCAA Site: position = -105 score = 5.28803 sequence = TTGATCTAAATCAA Gene: Sfri_1334: Outer membrane protein W precursor |
*
Shewanella halifaxensis HAW-EB4 Site: position = -107 score = 4.3602 sequence = TTGATTCAGGTCAA Gene: Shal_2887: Outer membrane protein W precursor |
*
Shewanella loihica PV-4 Site: position = -104 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Shew_2554: Outer membrane protein W precursor |
*
Shewanella oneidensis MR-1 Site: position = -293 score = 4.29605 sequence = TTGATGTAAATGAA Site: position = -106 score = 5.22563 sequence = TTGATTTGGATCAA Gene: SO1673: Outer membrane protein W precursor |
*
Shewanella pealeana ATCC 700345 Site: position = -155 score = 4.30927 sequence = GTGATCTAGATCCT Site: position = -104 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Spea_2787: Outer membrane protein W precursor |
*
Shewanella piezotolerans WP3 Site: position = -107 score = 5.63061 sequence = TTGATCTAGATCAA Gene: swp_3395: Outer membrane protein W precursor |
*
Shewanella putrefaciens CN-32 Site: position = -103 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Sputcn32_1392: Outer membrane protein W precursor |
*
Shewanella sediminis HAW-EB3 Site: position = -104 score = 5.58877 sequence = TTGATCTGGATCAA Site: position = -154 score = 3.7624 sequence = GTGAGCTTGGTCAT Gene: Ssed_1469: Outer membrane protein W precursor |
*
Shewanella sp ANA-3 Site: position = -103 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Shewana3_2775: Outer membrane protein W precursor |
*
Shewanella sp MR-4 Site: position = -103 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Shewmr4_2601: Outer membrane protein W precursor |
*
Shewanella sp MR-7 Site: position = -103 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Shewmr7_2668: Outer membrane protein W precursor |
*
Shewanella sp W3-18-1 Site: position = -103 score = 5.26747 sequence = TTGATTTAGATCAA Gene: Sputw3181_2709: Outer membrane protein W precursor |
*
Shewanella woodyi ATCC 51908 Site: position = -154 score = 4.1161 sequence = GTGAGTTCGATCAA Site: position = -104 score = 5.22563 sequence = TTGATTTGGATCAA Gene: Swoo_3207: Outer membrane protein W precursor |
Outer membrane protein W precursor |
| CRON 40. | |||||||||||||||||
| SO4504 |
*
Shewanella amazonensis SB2B Site: position = -109 score = 4.16769 sequence = ATGATCCACTTCAA Gene: Sama_3618: Conserved hypothetical protein |
*
Shewanella baltica OS155 Site: position = -132 score = 4.84654 sequence = ATGATCTAGTTCAA Site: position = -226 score = 4.23751 sequence = GTGATCTGCCGCAA Gene: Sbal_4131: Conserved hypothetical protein |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -121 score = 3.88585 sequence = GGGATCTAGTTCAA Site: position = -225 score = 4.59018 sequence = GTGATCTGGCGCAA Gene: Sfri_0052: Conserved hypothetical protein |
*
Shewanella halifaxensis HAW-EB4 Site: position = -120 score = 5.00936 sequence = TTGATCTAGTTCAA Gene: Shal_0100: Conserved hypothetical protein |
*
Shewanella loihica PV-4 Site: position = -123 score = 4.52036 sequence = ATGATCCAGTTCAA Gene: Shew_0054: Conserved hypothetical protein |
*
Shewanella oneidensis MR-1 Site: position = -126 score = 4.16769 sequence = ATGATCCACTTCAA Gene: SO4504: Conserved hypothetical protein |
*
Shewanella pealeana ATCC 700345 Site: position = -119 score = 5.00936 sequence = TTGATCTAGTTCAA Gene: Spea_4142: Conserved hypothetical protein |
*
Shewanella piezotolerans WP3 Site: position = -118 score = 5.00936 sequence = TTGATCTAGTTCAA Gene: swp_5034: Conserved hypothetical protein |
*
Shewanella putrefaciens CN-32 Site: position = -230 score = 4.09441 sequence = GTGATCTATCGCAA Site: position = -136 score = 4.49386 sequence = ATGATCTACTTCAA Gene: Sputcn32_0342: Conserved hypothetical protein |
*
Shewanella sediminis HAW-EB3 Site: position = -119 score = 4.83899 sequence = ATGATCCAGCTCAA Gene: Ssed_4426: Conserved hypothetical protein |
*
Shewanella sp ANA-3 Site: position = -127 score = 4.48632 sequence = ATGATCCACCTCAA Gene: Shewana3_3911: Conserved hypothetical protein |
*
Shewanella sp MR-4 Site: position = -127 score = 4.48632 sequence = ATGATCCACCTCAA Gene: Shewmr4_3715: Conserved hypothetical protein |
*
Shewanella sp MR-7 Site: position = -127 score = 4.48632 sequence = ATGATCCACCTCAA Gene: Shewmr7_3786: Conserved hypothetical protein |
*
Shewanella sp W3-18-1 Site: position = -136 score = 4.49386 sequence = ATGATCTACTTCAA Gene: Sputw3181_3866: Conserved hypothetical protein |
*
Shewanella woodyi ATCC 51908 Site: position = -144 score = 5.16517 sequence = ATGATCTAGCTCAA Gene: Swoo_4818: Conserved hypothetical protein |
Conserved hypothetical protein |
| SO4505 |
Gene: Sama_3617: Predicted formate dehydrogenase associated protein |
Gene: Sbal_4132: Predicted formate dehydrogenase associated protein |
|
Gene: Sfri_0053: Predicted formate dehydrogenase associated protein |
Gene: Shal_0101: Predicted formate dehydrogenase associated protein |
Gene: Shew_0055: Predicted formate dehydrogenase associated protein |
Gene: SO4505: Predicted formate dehydrogenase associated protein |
Gene: Spea_4141: Predicted formate dehydrogenase associated protein |
Gene: swp_5033: Predicted formate dehydrogenase associated protein |
Gene: Sputcn32_0341: Predicted formate dehydrogenase associated protein |
Gene: Ssed_4425: Predicted formate dehydrogenase associated protein |
Gene: Shewana3_3912: Predicted formate dehydrogenase associated protein |
Gene: Shewmr4_3716: Predicted formate dehydrogenase associated protein |
Gene: Shewmr7_3787: Predicted formate dehydrogenase associated protein |
Gene: Sputw3181_3867: Predicted formate dehydrogenase associated protein |
Gene: Swoo_4817: Predicted formate dehydrogenase associated protein |
Predicted formate dehydrogenase associated protein |
| SO4506 |
Gene: Sama_3616: Predicted iron-sulfur cluster-binding protein |
Gene: Sbal_4133: Predicted iron-sulfur cluster-binding protein |
|
Gene: Sfri_0054: Predicted iron-sulfur cluster-binding protein |
Gene: Shal_0102: Predicted iron-sulfur cluster-binding protein |
Gene: Shew_0056: Predicted iron-sulfur cluster-binding protein |
Gene: SO4506: Predicted iron-sulfur cluster-binding protein |
Gene: Spea_4140: Predicted iron-sulfur cluster-binding protein |
Gene: swp_5032: Predicted iron-sulfur cluster-binding protein |
Gene: Sputcn32_0340: Predicted iron-sulfur cluster-binding protein |
Gene: Ssed_4424: Predicted iron-sulfur cluster-binding protein |
Gene: Shewana3_3913: Predicted iron-sulfur cluster-binding protein |
Gene: Shewmr4_3717: Predicted iron-sulfur cluster-binding protein |
Gene: Shewmr7_3788: Predicted iron-sulfur cluster-binding protein |
Gene: Sputw3181_3868: Predicted iron-sulfur cluster-binding protein |
Gene: Swoo_4816: Predicted iron-sulfur cluster-binding protein |
Predicted iron-sulfur cluster-binding protein |
| SO4507 |
Gene: Sama_3615: Predicted formate dehydrogenase-specific chaperone |
Gene: Sbal_4134: Predicted formate dehydrogenase-specific chaperone |
|
Gene: Sfri_0055: Predicted formate dehydrogenase-specific chaperone |
Gene: Shal_0103: Predicted formate dehydrogenase-specific chaperone |
Gene: Shew_0057: Predicted formate dehydrogenase-specific chaperone |
Gene: SO4507: Predicted formate dehydrogenase-specific chaperone |
Gene: Spea_4139: Predicted formate dehydrogenase-specific chaperone |
Gene: swp_5031: Predicted formate dehydrogenase-specific chaperone |
Gene: Sputcn32_0339: Predicted formate dehydrogenase-specific chaperone |
Gene: Ssed_4423: Predicted formate dehydrogenase-specific chaperone |
Gene: Shewana3_3914: Predicted formate dehydrogenase-specific chaperone |
Gene: Shewmr4_3718: Predicted formate dehydrogenase-specific chaperone |
Gene: Shewmr7_3789: Predicted formate dehydrogenase-specific chaperone |
Gene: Sputw3181_3869: Predicted formate dehydrogenase-specific chaperone |
Gene: Swoo_4815: Predicted formate dehydrogenase-specific chaperone |
Predicted formate dehydrogenase-specific chaperone |
| fdhX |
Gene: Sama_3614: Formate dehydrogenase subunit or accessory protein |
Gene: Sbal_4135: Formate dehydrogenase subunit or accessory protein |
|
Gene: Sfri_0056: Formate dehydrogenase subunit or accessory protein |
Gene: Shal_0104: Formate dehydrogenase subunit or accessory protein |
Gene: Shew_0058: Formate dehydrogenase subunit or accessory protein |
Gene: SO4508: Formate dehydrogenase subunit or accessory protein |
Gene: Spea_4138: Formate dehydrogenase subunit or accessory protein |
Gene: swp_5030: Formate dehydrogenase subunit or accessory protein |
Gene: Sputcn32_0338: Formate dehydrogenase subunit or accessory protein |
Gene: Ssed_4422: Formate dehydrogenase subunit or accessory protein |
Gene: Shewana3_3915: Formate dehydrogenase subunit or accessory protein |
Gene: Shewmr4_3719: Formate dehydrogenase subunit or accessory protein |
Gene: Shewmr7_3790: Formate dehydrogenase subunit or accessory protein |
Gene: Sputw3181_3870: Formate dehydrogenase subunit or accessory protein |
Gene: Swoo_4814: Formate dehydrogenase subunit or accessory protein |
Formate dehydrogenase subunit or accessory protein |
| fdhA1 |
Gene: Sama_3613: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sbal_4136: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
|
Gene: Sfri_0057: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shal_0105: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shew_0059: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: SO4509: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Spea_4137: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: swp_5029: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sputcn32_0337: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Ssed_4421: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewana3_3916: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewmr4_3720: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Shewmr7_3791: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Sputw3181_3871: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Gene: Swoo_4813: Formate dehydrogenase, major subunit (EC 1.2.1.2) |
Formate dehydrogenase, major subunit (EC 1.2.1.2) |
| fdhB1 |
Gene: Sama_3612: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sbal_4137: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
|
Gene: Sfri_0058: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shal_0106: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shew_0060: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: SO4510: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Spea_4136: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: swp_5028: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sputcn32_0336: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Ssed_4420: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewana3_3917: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewmr4_3721: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Shewmr7_3792: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Sputw3181_3872: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Gene: Swoo_4812: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2) |
| fdhC1 |
Gene: Sama_3611: Formate dehydrogenase, gamma subunit |
Gene: Sbal_4138: Formate dehydrogenase, gamma subunit |
|
Gene: Sfri_0059: Formate dehydrogenase, gamma subunit |
Gene: Shal_0107: Formate dehydrogenase, gamma subunit |
Gene: Shew_0061: Formate dehydrogenase, gamma subunit |
Gene: SO4511: Formate dehydrogenase, gamma subunit |
Gene: Spea_4135: Formate dehydrogenase, gamma subunit |
Gene: swp_5027: Formate dehydrogenase, gamma subunit |
Gene: Sputcn32_0335: Formate dehydrogenase, gamma subunit |
Gene: Ssed_4419: Formate dehydrogenase, gamma subunit |
Gene: Shewana3_3918: Formate dehydrogenase, gamma subunit |
Gene: Shewmr4_3722: Formate dehydrogenase, gamma subunit |
Gene: Shewmr7_3793: Formate dehydrogenase, gamma subunit |
Gene: Sputw3181_3873: Formate dehydrogenase, gamma subunit |
Gene: Swoo_4811: Formate dehydrogenase, gamma subunit |
Formate dehydrogenase, gamma subunit |
| CRON 41. | |||||||||||||||||
| SO0579 |
*
Shewanella amazonensis SB2B Site: position = -118 score = 4.87295 sequence = TTGATTTGCATCAA Gene: Sama_0541: Predicted serine/threonine protein kinase |
*
Shewanella baltica OS155 Site: position = -154 score = 4.49514 sequence = TTGATGTAAGTCAA Gene: Sbal_0539: Predicted serine/threonine protein kinase |
*
Shewanella denitrificans OS217 Site: position = -87 score = 4.51154 sequence = TTGATGCAGGTCAA Gene: Sden_0539: Predicted serine/threonine protein kinase |
*
Shewanella frigidimarina NCIMB 400 Site: position = -226 score = 4.62675 sequence = TTGATATAGGTCAA Gene: Sfri_3500: Predicted serine/threonine protein kinase |
*
Shewanella halifaxensis HAW-EB4 Site: position = -123 score = 4.83935 sequence = TTGATGTGTATCAA Gene: Shal_0673: Predicted serine/threonine protein kinase |
*
Shewanella loihica PV-4 Site: position = -124 score = 4.62675 sequence = TTGATATAGGTCAA Gene: Shew_3263: Predicted serine/threonine protein kinase |
*
Shewanella oneidensis MR-1 Site: position = -145 score = 4.86526 sequence = TTGATATAAATCAA Gene: SO0579: Predicted serine/threonine protein kinase |
*
Shewanella pealeana ATCC 700345 Site: position = -123 score = 4.81332 sequence = TTGATATGCATCAA Gene: Spea_0586: Predicted serine/threonine protein kinase |
*
Shewanella piezotolerans WP3 Site: position = -140 score = 4.85516 sequence = TTGATATACATCAA Gene: swp_4517: Predicted serine/threonine protein kinase |
*
Shewanella putrefaciens CN-32 Site: position = -152 score = 4.28417 sequence = TTGATATAAGTCAA Gene: Sputcn32_3298: Predicted serine/threonine protein kinase |
*
Shewanella sediminis HAW-EB3 Site: position = -185 score = 4.62675 sequence = TTGATATAGGTCAA Gene: Ssed_4012: Predicted serine/threonine protein kinase |
*
Shewanella sp ANA-3 Site: position = -152 score = 4.86526 sequence = TTGATATAAATCAA Gene: Shewana3_0578: Predicted serine/threonine protein kinase |
*
Shewanella sp MR-4 Site: position = -154 score = 4.86526 sequence = TTGATATAAATCAA Gene: Shewmr4_0579: Predicted serine/threonine protein kinase |
*
Shewanella sp MR-7 Site: position = -154 score = 4.86526 sequence = TTGATATAAATCAA Gene: Shewmr7_3451: Predicted serine/threonine protein kinase |
*
Shewanella sp W3-18-1 Site: position = -152 score = 4.28417 sequence = TTGATATAAGTCAA Gene: Sputw3181_0643: Predicted serine/threonine protein kinase |
*
Shewanella woodyi ATCC 51908 Site: position = -226 score = 4.83771 sequence = TTGATGTAGGTCAA Gene: Swoo_4155: Predicted serine/threonine protein kinase |
Predicted serine/threonine protein kinase |
| CRON 42. | |||||||||||||||||
| gltP |
Gene: Sama_2768: Sodium/glutamate symport protein |
Gene: Sbal_0768: Sodium/glutamate symport protein |
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -107 score = 4.32923 sequence = GTGATACAGATCAT Gene: Shal_0827: Sodium/glutamate symport protein |
*
Shewanella loihica PV-4 Site: position = -153 score = 4.16365 sequence = TTGATATGAATCAC Gene: Shew_0743: Sodium/glutamate symport protein |
*
Shewanella oneidensis MR-1 Site: position = -171 score = 4.03948 sequence = GTGACATAGATCAT Gene: SO0922: Sodium/glutamate symport protein |
*
Shewanella pealeana ATCC 700345 Site: position = -108 score = 4.86637 sequence = GTGATGTAGATCAT Gene: Spea_0775: Sodium/glutamate symport protein |
*
Shewanella piezotolerans WP3 Site: position = -108 score = 4.32923 sequence = GTGATACAGATCAT Gene: swp_4258: Sodium/glutamate symport protein |
*
Shewanella putrefaciens CN-32 Site: position = -131 score = 4.65541 sequence = GTGATATAGATCAT Gene: Sputcn32_0863: Sodium/glutamate symport protein |
*
Shewanella sediminis HAW-EB3 Site: position = -169 score = 4.15191 sequence = TTGATATTGATCAC Gene: Ssed_0862: Sodium/glutamate symport protein |
*
Shewanella sp ANA-3 Site: position = -122 score = 4.65541 sequence = GTGATATAGATCAT Gene: Shewana3_3362: Sodium/glutamate symport protein |
*
Shewanella sp MR-4 Site: position = -122 score = 4.65541 sequence = GTGATATAGATCAT Gene: Shewmr4_0764: Sodium/glutamate symport protein |
*
Shewanella sp MR-7 Site: position = -122 score = 4.65541 sequence = GTGATATAGATCAT Gene: Shewmr7_3259: Sodium/glutamate symport protein |
*
Shewanella sp W3-18-1 Site: position = -131 score = 4.65541 sequence = GTGATATAGATCAT Gene: Sputw3181_3312: Sodium/glutamate symport protein |
|
Sodium/glutamate symport protein |
| CRON 43. | |||||||||||||||||
| lldP |
*
Shewanella amazonensis SB2B Site: position = -132 score = 4.88833 sequence = ATGATCTGTATCAA Gene: Sama_2439: L-lactate permease |
*
Shewanella baltica OS155 Site: position = -177 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Sbal_1354: L-lactate permease |
Gene: Sden_2574: L-lactate permease |
*
Shewanella frigidimarina NCIMB 400 Site: position = -112 score = 4.99936 sequence = ATGATCTCGATCAA Gene: Sfri_2793: L-lactate permease |
*
Shewanella halifaxensis HAW-EB4 Site: position = -214 score = 4.92899 sequence = TTGATCTGGATCAC Gene: Shal_3083: L-lactate permease |
*
Shewanella loihica PV-4 Site: position = -162 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Shew_3135: L-lactate permease |
*
Shewanella oneidensis MR-1 Site: position = -176 score = 5.25978 sequence = ATGATCTAGATCAT Gene: SO1522: L-lactate permease |
*
Shewanella pealeana ATCC 700345 Site: position = -190 score = 4.9336 sequence = ATGATCCAGATCAT Gene: Spea_2994: L-lactate permease |
*3
Shewanella piezotolerans WP3 Site: position = -128 score = 4.84254 sequence = CTGATCTAGATCAT Gene: swp_3631: L-lactate permease Gene: swp_3632: L-lactate permease Site: position = -376 score = 4.74375 sequence = TTGATCCACATCAT Gene: swp_1813: L-lactate permease |
*
Shewanella putrefaciens CN-32 Site: position = -175 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Sputcn32_1272: L-lactate permease |
*
Shewanella sediminis HAW-EB3 Site: position = -375 score = 5.03818 sequence = TTGATCTGAATCAT Gene: Ssed_0907: L-lactate permease |
*
Shewanella sp ANA-3 Site: position = -177 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Shewana3_2904: L-lactate permease |
*
Shewanella sp MR-4 Site: position = -177 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Shewmr4_2734: L-lactate permease |
*
Shewanella sp MR-7 Site: position = -177 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Shewmr7_2807: L-lactate permease |
*
Shewanella sp W3-18-1 Site: position = -175 score = 5.25978 sequence = ATGATCTAGATCAT Gene: Sputw3181_2834: L-lactate permease |
|
L-lactate permease |
| dld |
Gene: Sama_2440: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sbal_1353: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
|
Gene: Sfri_2794: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shal_3084: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shew_3136: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: SO1521: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Spea_2995: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
2
Shewanella piezotolerans WP3 Gene: swp_3633: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Gene: swp_1812: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sputcn32_1271: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Ssed_0908: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewana3_2905: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewmr4_2735: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewmr7_2808: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sputw3181_2835: Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
|
Predicted lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
| CRON 44. | |||||||||||||||||
| nrdD |
*
Shewanella amazonensis SB2B Site: position = -114 score = 4.60399 sequence = ATGATCCATATCAA Gene: Sama_1275: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella baltica OS155 Site: position = -122 score = 5.21794 sequence = ATGATCTGGATCAT Gene: Sbal_1665: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella denitrificans OS217 Site: position = -166 score = 5.46779 sequence = ATGATCTAGATCAA Gene: Sden_1419: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -106 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Sfri_2443: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -123 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Shal_2692: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella loihica PV-4 Site: position = -122 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Shew_2449: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella oneidensis MR-1 Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Site: position = -269 score = 3.96918 sequence = TTGATTTTAAGCAT Gene: SO2834: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella pealeana ATCC 700345 Site: position = -123 score = 5.42594 sequence = ATGATCTGGATCAA Gene: Spea_2619: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella piezotolerans WP3 Site: position = -122 score = 5.42594 sequence = ATGATCTGGATCAA Site: position = -62 score = 3.79317 sequence = TTGATTTAAAGTAA Gene: swp_3165: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella putrefaciens CN-32 Site: position = -203 score = 3.90763 sequence = ATGACTTAGGTCAA Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Gene: Sputcn32_1540: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella sediminis HAW-EB3 Site: position = -122 score = 4.97067 sequence = ATGATCGAGATCAA Gene: Ssed_1600: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella sp ANA-3 Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Gene: Shewana3_2603: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella sp MR-4 Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Gene: Shewmr4_2441: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella sp MR-7 Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Gene: Shewmr7_2511: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella sp W3-18-1 Site: position = -121 score = 5.21794 sequence = ATGATCTGGATCAT Site: position = -203 score = 3.90763 sequence = ATGACTTAGGTCAA Gene: Sputw3181_2559: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
*
Shewanella woodyi ATCC 51908 Site: position = -122 score = 4.80469 sequence = ATGATCAGGATCAA Gene: Swoo_3049: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) |
| nrdG |
Gene: Sama_1276: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Sbal_1666: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Sden_1420: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Sfri_2442: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Shal_2691: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Shew_2448: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: SO2833: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Spea_2618: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: swp_3164: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Sputcn32_1541: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Ssed_1601: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Shewana3_2602: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Shewmr4_2440: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Shewmr7_2510: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Sputw3181_2558: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Gene: Swoo_3048: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
| CRON 45. | |||||||||||||||||
| Shew_2655 |
|
|
|
|
*
Shewanella halifaxensis HAW-EB4 Site: position = -79 score = 4.49972 sequence = TTGTTTTAGATCAA Gene: Shal_3305: Conserved hypothetical protein |
*
Shewanella loihica PV-4 Site: position = -80 score = 4.49972 sequence = TTGTTTTAGATCAA Gene: Shew_2655: Conserved hypothetical protein |
|
*
Shewanella pealeana ATCC 700345 Site: position = -79 score = 4.49972 sequence = TTGTTTTAGATCAA Gene: Spea_3233: Conserved hypothetical protein |
*
Shewanella piezotolerans WP3 Site: position = -128 score = 4.10924 sequence = ATGATCTTGCTCAC Site: position = -79 score = 4.82102 sequence = TTGTTCTGGATCAA Gene: swp_1107: Conserved hypothetical protein |
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Shewanella sediminis HAW-EB3 Site: position = -139 score = 4.2321 sequence = TTGATCTTAATCAC Site: position = -90 score = 4.17355 sequence = TTGTTTCAGATCAA Gene: Ssed_3185: Conserved hypothetical protein |
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Shewanella woodyi ATCC 51908 Site: position = -78 score = 4.53669 sequence = TTGTTCCAGATCAA Gene: Swoo_3303: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 46. | |||||||||||||||||
| uspE |
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Shewanella amazonensis SB2B Site: position = -74 score = 4.60693 sequence = TTGATCTAAAACAA Gene: Sama_1800: Universal stress protein E |
*2
Shewanella baltica OS155 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Sbal_4496: Universal stress protein E Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Sbal_2210: Universal stress protein E |
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Shewanella denitrificans OS217 Site: position = -69 score = 4.24545 sequence = TTGATATAGCTCAC Gene: Sden_1842: Universal stress protein E |
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Shewanella frigidimarina NCIMB 400 Site: position = -87 score = 4.62755 sequence = ATGATCTATCTCAA Gene: Sfri_2019: Universal stress protein E |
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Shewanella halifaxensis HAW-EB4 Site: position = -73 score = 4.60693 sequence = TTGATCTAAAACAA Gene: Shal_2206: Universal stress protein E |
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Shewanella loihica PV-4 Site: position = -72 score = 4.60693 sequence = TTGATCTAAAACAA Gene: Shew_1994: Universal stress protein E |
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Shewanella oneidensis MR-1 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: SO2355: Universal stress protein E |
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Shewanella pealeana ATCC 700345 Site: position = -74 score = 4.60693 sequence = TTGATCTAAAACAA Gene: Spea_2223: Universal stress protein E |
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Shewanella piezotolerans WP3 Site: position = -71 score = 4.60693 sequence = TTGATCTAAAACAA Gene: swp_2581: Universal stress protein E |
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Shewanella putrefaciens CN-32 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Sputcn32_1950: Universal stress protein E |
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Shewanella sediminis HAW-EB3 Site: position = -71 score = 4.56509 sequence = TTGATCTGAAACAA Gene: Ssed_2220: Universal stress protein E |
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Shewanella sp ANA-3 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Shewana3_2116: Universal stress protein E |
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Shewanella sp MR-4 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Shewmr4_2015: Universal stress protein E |
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Shewanella sp MR-7 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Shewmr7_1960: Universal stress protein E |
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Shewanella sp W3-18-1 Site: position = -72 score = 4.94951 sequence = TTGATCTAGAACAA Gene: Sputw3181_2055: Universal stress protein E |
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Shewanella woodyi ATCC 51908 Site: position = -70 score = 4.93649 sequence = TTGATCTAAAGCAA Gene: Swoo_2416: Universal stress protein E |
Universal stress protein E |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |