Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4504 gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -109
Score: 4.16769
Sequence: ATGATCCACTTCAA
Locus tag: Sama_3618
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Sama_3617
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Sama_3616
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Sama_3615
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Sama_3614
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Sama_3613
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Sama_3612
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sama_3611
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -109 4.2 ATGATCCACTTCAA Sama_3618
Shewanella baltica OS155
Position: -226
Score: 4.23751
Sequence: GTGATCTGCCGCAA
Position: -132
Score: 4.84654
Sequence: ATGATCTAGTTCAA
Locus tag: Sbal_4131
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Sbal_4132
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Sbal_4133
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Sbal_4134
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Sbal_4135
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Sbal_4136
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Sbal_4137
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sbal_4138
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -226 4.2 GTGATCTGCCGCAA Sbal_4131
-132 4.8 ATGATCTAGTTCAA
Shewanella frigidimarina NCIMB 400
Position: -225
Score: 4.59018
Sequence: GTGATCTGGCGCAA
Position: -121
Score: 3.88585
Sequence: GGGATCTAGTTCAA
Locus tag: Sfri_0052
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Sfri_0053
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Sfri_0054
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Sfri_0055
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Sfri_0056
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Sfri_0057
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Sfri_0058
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sfri_0059
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -225 4.6 GTGATCTGGCGCAA Sfri_0052
-121 3.9 GGGATCTAGTTCAA
Shewanella halifaxensis HAW-EB4
Position: -120
Score: 5.00936
Sequence: TTGATCTAGTTCAA
Locus tag: Shal_0100
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Shal_0101
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Shal_0102
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Shal_0103
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Shal_0104
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Shal_0105
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Shal_0106
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shal_0107
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -120 5 TTGATCTAGTTCAA Shal_0100
Shewanella loihica PV-4
Position: -123
Score: 4.52036
Sequence: ATGATCCAGTTCAA
Locus tag: Shew_0054
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Shew_0055
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Shew_0056
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Shew_0057
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Shew_0058
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Shew_0059
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Shew_0060
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shew_0061
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -123 4.5 ATGATCCAGTTCAA Shew_0054
Shewanella oneidensis MR-1
Position: -126
Score: 4.16769
Sequence: ATGATCCACTTCAA
Locus tag: SO4504
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: SO4505
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: SO4506
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: SO4507
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: SO4508
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: SO4509
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: SO4510
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: SO4511
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -126 4.2 ATGATCCACTTCAA SO4504
Shewanella pealeana ATCC 700345
Position: -119
Score: 5.00936
Sequence: TTGATCTAGTTCAA
Locus tag: Spea_4142
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Spea_4141
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Spea_4140
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Spea_4139
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Spea_4138
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Spea_4137
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Spea_4136
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Spea_4135
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -119 5 TTGATCTAGTTCAA Spea_4142
Shewanella piezotolerans WP3
Position: -118
Score: 5.00936
Sequence: TTGATCTAGTTCAA
Locus tag: swp_5034
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: swp_5033
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: swp_5032
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: swp_5031
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: swp_5030
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: swp_5029
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: swp_5028
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: swp_5027
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -118 5 TTGATCTAGTTCAA swp_5034
Shewanella putrefaciens CN-32
Position: -230
Score: 4.09441
Sequence: GTGATCTATCGCAA
Position: -136
Score: 4.49386
Sequence: ATGATCTACTTCAA
Locus tag: Sputcn32_0342
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Sputcn32_0341
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Sputcn32_0340
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Sputcn32_0339
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Sputcn32_0338
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Sputcn32_0337
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Sputcn32_0336
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sputcn32_0335
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -230 4.1 GTGATCTATCGCAA Sputcn32_0342
-136 4.5 ATGATCTACTTCAA
Shewanella sediminis HAW-EB3
Position: -119
Score: 4.83899
Sequence: ATGATCCAGCTCAA
Locus tag: Ssed_4426
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Ssed_4425
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Ssed_4424
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Ssed_4423
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Ssed_4422
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Ssed_4421
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Ssed_4420
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Ssed_4419
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -119 4.8 ATGATCCAGCTCAA Ssed_4426
Shewanella sp ANA-3
Position: -127
Score: 4.48632
Sequence: ATGATCCACCTCAA
Locus tag: Shewana3_3911
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Shewana3_3912
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Shewana3_3913
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Shewana3_3914
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Shewana3_3915
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Shewana3_3916
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Shewana3_3917
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewana3_3918
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -127 4.5 ATGATCCACCTCAA Shewana3_3911
Shewanella sp MR-4
Position: -127
Score: 4.48632
Sequence: ATGATCCACCTCAA
Locus tag: Shewmr4_3715
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Shewmr4_3716
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Shewmr4_3717
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Shewmr4_3718
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Shewmr4_3719
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Shewmr4_3720
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Shewmr4_3721
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewmr4_3722
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -127 4.5 ATGATCCACCTCAA Shewmr4_3715
Shewanella sp MR-7
Position: -127
Score: 4.48632
Sequence: ATGATCCACCTCAA
Locus tag: Shewmr7_3786
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Shewmr7_3787
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Shewmr7_3788
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Shewmr7_3789
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Shewmr7_3790
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Shewmr7_3791
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Shewmr7_3792
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewmr7_3793
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -127 4.5 ATGATCCACCTCAA Shewmr7_3786
Shewanella sp W3-18-1
Position: -136
Score: 4.49386
Sequence: ATGATCTACTTCAA
Locus tag: Sputw3181_3866
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Sputw3181_3867
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Sputw3181_3868
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Sputw3181_3869
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Sputw3181_3870
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Sputw3181_3871
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Sputw3181_3872
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sputw3181_3873
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -136 4.5 ATGATCTACTTCAA Sputw3181_3866
Shewanella woodyi ATCC 51908
Position: -144
Score: 5.16517
Sequence: ATGATCTAGCTCAA
Locus tag: Swoo_4818
Name: SO4504
Funciton: Conserved hypothetical protein
Locus tag: Swoo_4817
Name: SO4505
Funciton: Predicted formate dehydrogenase associated protein
Locus tag: Swoo_4816
Name: SO4506
Funciton: Predicted iron-sulfur cluster-binding protein
Locus tag: Swoo_4815
Name: SO4507
Funciton: Predicted formate dehydrogenase-specific chaperone
Locus tag: Swoo_4814
Name: fdhX
Funciton: Formate dehydrogenase subunit or accessory protein
Locus tag: Swoo_4813
Name: fdhA1
Funciton: Formate dehydrogenase, major subunit (EC 1.2.1.2)
Locus tag: Swoo_4812
Name: fdhB1
Funciton: Formate dehydrogenase, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Swoo_4811
Name: fdhC1
Funciton: Formate dehydrogenase, gamma subunit
SO4504-SO4505-SO4506-SO4507-fdhX-fdhA1-fdhB1-fdhC1 -144 5.2 ATGATCTAGCTCAA Swoo_4818
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