Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sucD gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -165
Score: 4.00811
Sequence: ATGATATAGCTCAG
Locus tag: Sama_1427
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sama_1428
Name: sucB
Funciton: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2)
Locus tag: Sama_1429
Name: sucC
Funciton: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5)
Locus tag: Sama_1430
Name: sucD
Funciton: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5)
sucA-sucB-sucC-sucD -165 4 ATGATATAGCTCAG Sama_1427
Shewanella halifaxensis HAW-EB4
Position: -183
Score: 4.40807
Sequence: TTGATATAGCTCTA
Locus tag: Shal_2489
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Shal_2488
Name: sucB
Funciton: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2)
Locus tag: Shal_2487
Name: sucC
Funciton: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5)
Locus tag: Shal_2486
Name: sucD
Funciton: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5)
sucA-sucB-sucC-sucD -183 4.4 TTGATATAGCTCTA Shal_2489
Shewanella pealeana ATCC 700345
Position: -186
Score: 4.40807
Sequence: TTGATATAGCTCTA
Locus tag: Spea_1788
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Spea_1789
Name: sucB
Funciton: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2)
Locus tag: Spea_1790
Name: sucC
Funciton: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5)
Locus tag: Spea_1791
Name: sucD
Funciton: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5)
sucA-sucB-sucC-sucD -186 4.4 TTGATATAGCTCTA Spea_1788
Shewanella piezotolerans WP3
Position: -184
Score: 4.40807
Sequence: TTGATATAGCTCTA
Locus tag: swp_2949
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: swp_2948
Name: sucB
Funciton: 2-oxoglutarate dehydrogenase, E2 component (EC 1.2.4.2)
Locus tag: swp_2947
Name: sucC
Funciton: Succinyl-CoA ligase, ADP-forming, beta chain (EC 6.2.1.5)
Locus tag: swp_2946
Name: sucD
Funciton: Succinyl-CoA ligase, alpha chain (EC 6.2.1.5)
sucA-sucB-sucC-sucD -184 4.4 TTGATATAGCTCTA swp_2949