Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mtrF gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -377
Score: 3.83142
Sequence: TTAATCTCAATCAT
Locus tag: Sama_1213
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Sama_1212
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Sama_1211
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -377 3.8 TTAATCTCAATCAT Sama_1213
Shewanella baltica OS155
Position: -362
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Sbal_1593
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Sbal_1592
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Sbal_1591
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -362 4.2 TTTACCTAGATCAA Sbal_1593
Shewanella halifaxensis HAW-EB4
Position: -363
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Shal_2778
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shal_2779
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Shal_2780
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -363 4.2 TTTACCTAGATCAA Shal_2778
Shewanella loihica PV-4
Position: -318
Score: 4.85043
Sequence: TTTATCTAGATCAA
Position: -166
Score: 4.62641
Sequence: GTGATCTAGATCAC
Locus tag: Shew_2519
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shew_2520
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Shew_2521
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -318 4.9 TTTATCTAGATCAA Shew_2519
-166 4.6 GTGATCTAGATCAC
Shewanella oneidensis MR-1
Position: -397
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: SO1782
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: SO1781
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: SO1780
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -397 4.2 TTTACCTAGATCAA SO1782
Shewanella pealeana ATCC 700345
Position: -344
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Spea_2692
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Spea_2693
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Spea_2694
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -344 4.2 TTTACCTAGATCAA Spea_2692
Shewanella piezotolerans WP3
Position: -366
Score: 4.85043
Sequence: TTTATCTAGATCAA
Position: -181
Score: 3.79868
Sequence: GTGACGTAGATCAC
Locus tag: swp_3272
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: swp_3273
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: swp_3274
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -366 4.9 TTTATCTAGATCAA swp_3272
-181 3.8 GTGACGTAGATCAC
Shewanella sediminis HAW-EB3
Position: -349
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Ssed_1530
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Ssed_1529
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Ssed_1528
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -349 4.2 TTTACCTAGATCAA Ssed_1530
Shewanella sp ANA-3
Position: -353
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Shewana3_2672
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewana3_2673
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Shewana3_2674
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -353 4.2 TTTACCTAGATCAA Shewana3_2672
Shewanella sp MR-4
Position: -353
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Shewmr4_2506
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewmr4_2507
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Shewmr4_2508
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -353 4.2 TTTACCTAGATCAA Shewmr4_2506
Shewanella sp MR-7
Position: -353
Score: 4.23451
Sequence: TTTACCTAGATCAA
Locus tag: Shewmr7_2574
Name: mtrD
Funciton: Periplasmic decaheme cytochrome c, MtrD
Locus tag: Shewmr7_2575
Name: mtrE
Funciton: Outer membrane protein, MtrE
Locus tag: Shewmr7_2576
Name: mtrF
Funciton: Decaheme cytochrome c, MtrF
mtrD-mtrE-mtrF -353 4.2 TTTACCTAGATCAA Shewmr7_2574