Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sama_0549 gene

Properties
Regulog: Fnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Proteobacteria/gamma
Built upon 541 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -135
Score: 4.58862
Sequence: TTGATTCACATCAA
Position: -75
Score: 4.27506
Sequence: TTGATCAAGATCAG
Locus tag: Sama_0549
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -135 4.6 TTGATTCACATCAA Sama_0549
-75 4.3 TTGATCAAGATCAG
Shewanella baltica OS155
Position: -75
Score: 4.27506
Sequence: TTGATCAAGATCAG
Locus tag: Sbal_3565
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4.3 TTGATCAAGATCAG Sbal_3565
Shewanella frigidimarina NCIMB 400
Position: -75
Score: 4.27506
Sequence: TTGATCAAGATCAG
Locus tag: Sfri_0507
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4.3 TTGATCAAGATCAG Sfri_0507
Shewanella halifaxensis HAW-EB4
Position: -75
Score: 4.03029
Sequence: TTGACTAAGATCAA
Locus tag: Shal_0680
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4 TTGACTAAGATCAA Shal_0680
Shewanella loihica PV-4
Position: -87
Score: 4.3992
Sequence: TTGATCGAGATCAG
Locus tag: Shew_3247
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -87 4.4 TTGATCGAGATCAG Shew_3247
Shewanella pealeana ATCC 700345
Position: -138
Score: 4.226
Sequence: ATGATCTACAACAT
Position: -78
Score: 4.15443
Sequence: TTGACTGAGATCAA
Locus tag: Spea_0593
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -138 4.2 ATGATCTACAACAT Spea_0593
-78 4.2 TTGACTGAGATCAA
Shewanella piezotolerans WP3
Position: 0
Score: 4.39343
Sequence: TTGACCAAGATCAA
Locus tag: swp_4510
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 0 4.4 TTGACCAAGATCAA swp_4510
Shewanella putrefaciens CN-32
Position: -75
Score: 4.23322
Sequence: TTGATCAGGATCAG
Locus tag: Sputcn32_0777
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4.2 TTGATCAGGATCAG Sputcn32_0777
Shewanella sediminis HAW-EB3
Position: -244
Score: 4.19066
Sequence: TTTATCTAGATCAC
Position: -87
Score: 4.3992
Sequence: TTGATCGAGATCAG
Locus tag: Ssed_4003
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -244 4.2 TTTATCTAGATCAC Ssed_4003
-87 4.4 TTGATCGAGATCAG
Shewanella sp ANA-3
Position: -75
Score: 4.23322
Sequence: TTGATCAGGATCAG
Locus tag: Shewana3_0738
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4.2 TTGATCAGGATCAG Shewana3_0738
Shewanella sp W3-18-1
Position: -75
Score: 4.23322
Sequence: TTGATCAGGATCAG
Locus tag: Sputw3181_3398
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -75 4.2 TTGATCAGGATCAG Sputw3181_3398
Shewanella woodyi ATCC 51908
Position: -77
Score: 4.3992
Sequence: TTGATCGAGATCAG
Locus tag: Swoo_4146
Name: Sama_0549
Funciton: Conserved hypothetical protein
Sama_0549 -77 4.4 TTGATCGAGATCAG Swoo_4146