Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Desulfovibrio vulgaris str. Miyazaki F

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArsR Arsenate Arsenic resistance 2 1
TF ArsR3 Arsenic resistance 2 2
TF BirA Biotin Biotin biosynthesis 2 2
TF CooA Carbon monoxide utilization 1 1
TF DVU0030 Amino acid transport 2 2
TF DVU0057 2 1
TF DVU0110 3 1
TF DVU0118 1 1
TF DVU0151 Metabolite transport 2 2
TF DVU0436 1 1
TF DVU0525 Multidrug resistance 1 2
TF DVU0539/DVU0946 4 5
TF DVU0569 Amino acid metabolism 1 3
TF DVU0619 1 3
TF DVU0621 Nitrite Nitrate and nitrite respiration 3 2
TF DVU0744 1 4
TF DVU0804 1 1
TF DVU1063 Motility 11 12
TF DVU1419 2 2
TF DVU1964/DVU1967 2 2
TF DVU2114 2 4
TF DVU2359 1 3
TF DVU2394 Energy metabolism 4 1
TF DVU2423 Nitrogen metabolism 3 2
TF DVU2894 Motility 7 2
TF DVU2934 1 4
TF DVU2956 2 3
TF DVU3023 Lactate Lactate utilization 2 5
TF DVU3305 2 4
TF DVUA0057 Biofilm formation 4 6
TF DVUA0100 3 6
TF DVUA0143 Nitrogen fixation 3 4
TF DvMF_1479 Amino acid transport 1 1
TF DvMF_1708 1 1
TF DvMF_1994 Carbohydrate metabolism 3 3
TF DvMF_2930 2 2
TF FliA Motility 22 12
TF Fur Iron ion, (Fe2+) Iron homeostasis 17 14
TF GlpR Glycerol 3-phosphate Glycerol utilization 1 2
TF HcpR Nitric oxide Nitrosative stress response 3 2
TF HmcR Energy metabolism 2 2
TF HrcA Heat shock Heat shock response 3 1
TF HrsM 4 2
TF KdpR KdpS, sensor histidine kinase Potassium homeostasis 1 2
TF LldR L-lactate Lactate utilization 3 2
TF LysX Lysine biosynthesis 4 3
TF ModE2 Molybdenum Molybdopterin biosynthesis; Molybdenum homeostasis 13 7
TF NifA-1 Nitrogen assimilation 11 22
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 6 3
TF OhcR Energy metabolism 1 2
TF PdxQ Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PerR Peroxide stress response 5 3
TF PhoB Inorganic phosphate Phosphate metabolism 15 11
TF PspF PspA regulatory protein Phage shock response 1 1
TF Rex NADH Energy metabolism 16 12
TF RpoN Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism 95 77
TF SahR S-adenosylhomocysteine Methionine metabolism 5 3
TF SmtB Heavy metal resistance 2 1
TF TmcR Energy metabolism 1 2
TF TunR Molybdate; Tungsten Tungsten homeostasis; Molybdenum homeostasis 10 11
TF TunR2 Molybdenum homeostasis; Metabolite transport 3 4
TF ZraR Zinc ion, (Zn2+) Zinc homeostasis 3 4
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 1
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 8 2
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA SAM S-adenosylmethionine Methionine biosynthesis 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA yybP-ykoY 2 1
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise