Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfovibrio vulgaris str. Miyazaki F

Properties
Regulator type: Transcription factor
TF locus tag: DvMF_1390
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 33
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -148
Score: 4.1
Sequence: GTGGGGAATTTTTTCACGAA
Position: -76
Score: 4.3
Sequence: CTTGTGAACGTTTGCACGAA
Locus tag: DvMF_1386
Name: atpI1
Funciton: ATP synthase protein I
Locus tag: DvMF_1387
Name: atpI2
Funciton: ATP synthase protein I2
Locus tag: DvMF_1388
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: DvMF_1389
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: DvMF_1390
Name: rex
Funciton: Redox-sensing transcriptional repressor Rex
DvMF_1386
atpI1
ATP synthase protein I
DvMF_1387
atpI2
ATP synthase protein I2
DvMF_1388
atpB
ATP synthase A chain (EC 3.6.3.14)
DvMF_1389
atpE
ATP synthase C chain (EC 3.6.3.14)
DvMF_1390
rex
Redox-sensing transcriptional repressor Rex
Position: -38
Score: 4.9
Sequence: TTTGAGCTTAAATTCACAAC
Locus tag: DvMF_2826
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DvMF_2827
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DvMF_2828
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DvMF_2829
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DvMF_2830
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DvMF_2831
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DvMF_2832
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
DvMF_2826
atpF1
ATP synthase B' chain (EC 3.6.3.14)
DvMF_2827
atpF2
ATP synthase F0, B subunit
DvMF_2828
atpH
ATP synthase delta chain (EC 3.6.3.14)
DvMF_2829
atpA
ATP synthase alpha chain (EC 3.6.3.14)
DvMF_2830
atpG
ATP synthase gamma chain (EC 3.6.3.14)
DvMF_2831
atpD
ATP synthase beta chain (EC 3.6.3.14)
DvMF_2832
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -175
Score: 4.5
Sequence: ATCGTGATTGTTTTCACGAA
Locus tag: DvMF_0320
Name: phsA
Funciton: thiosulfate reductase, putative
Locus tag: DvMF_0319
Name: phsB
Funciton: thiosulfate reductase, iron-sulfur binding subunit
DvMF_0320
phsA
thiosulfate reductase, putative
DvMF_0319
phsB
thiosulfate reductase, iron-sulfur binding subunit
Position: -112
Score: 5.1
Sequence: TTCGTGAAATATTTCACCTT
Locus tag: DvMF_2690
Name: qrcA
Funciton: cytochrome c class III family protein
Locus tag: DvMF_2689
Name: qrcB
Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: DvMF_2688
Name: qrcC
Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: DvMF_2687
Name: qrcD
Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative
DvMF_2690
qrcA
cytochrome c class III family protein
DvMF_2689
qrcB
molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
DvMF_2688
qrcC
molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
DvMF_2687
qrcD
molybdopterin oxidoreductase, transmembrane subunit, putative
Position: -92
Score: 5.3
Sequence: TTTGTGCTATTTGGCACAAA
Locus tag: DvMF_0420
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
DvMF_0420
ppaC
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Position: -96
Score: 4.5
Sequence: CTTGAGAAAAAAGGCGCAAA
Locus tag: DvMF_0500
Name: hupB
Funciton: DNA-binding protein HU-beta (hupB)
DvMF_0500
hupB
DNA-binding protein HU-beta (hupB)
Position: 21
Score: 4.2
Sequence: TTCGTCAAATTGTGCACAGG
Locus tag: DvMF_0274
Name: hysB
Funciton: periplasmic [NiFeSe] hydrogenase, small subunit
Locus tag: DvMF_0273
Name: hysA
Funciton: periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
DvMF_0274
hysB
periplasmic [NiFeSe] hydrogenase, small subunit
DvMF_0273
hysA
periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
Position: -164
Score: 5.4
Sequence: TATGTAAAATATTTCACAAG
Locus tag: DvMF_0074
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
DvMF_0074
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Position: -171
Score: 5.1
Sequence: ATTGTTAAATCAGTCACAAG
Locus tag: DvMF_2892
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: DvMF_2893
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: DvMF_2894
Name: qmoA
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: DvMF_2895
Name: qmoB
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: DvMF_2896
Name: qmoC
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: DvMF_2897
Name: null
Funciton: hypothetical protein
DvMF_2892
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
DvMF_2893
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
DvMF_2894
qmoA
quinone-interacting membrane-bound oxidoreductase complex subunit A
DvMF_2895
qmoB
quinone-interacting membrane-bound oxidoreductase complex subunit B
DvMF_2896
qmoC
quinone-interacting membrane-bound oxidoreductase complex subunit C
DvMF_2897
hypothetical protein
Position: -30
Score: 5.1
Sequence: CTCGTGAAAATTATTACAAG
Locus tag: DvMF_0293
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
DvMF_0293
adk
Adenylate kinase (EC 2.7.4.3)
Position: -151
Score: 4.5
Sequence: TTTGTCCAAAAAATCACGAG
Locus tag: DvMF_1553
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: DvMF_1554
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: DvMF_1555
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
DvMF_1553
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
DvMF_1554
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
DvMF_1555
dsrD
Dissimilatory sulfite reductase D
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