Regulon of TunR in Desulfovibrio vulgaris str. Miyazaki F
| Regulator type: | Transcription factor |
| TF locus tag: | DvMF_2476 |
| Regulator family: | TunR |
| Regulation mode: | activator |
| Biological process: | Tungsten homeostasis; Molybdenum homeostasis |
| Effector: | Molybdate; Tungsten |
| Regulog: | TunR - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 17 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - TunR
- By effector - Molybdate
- By effector - Tungsten
- By pathway - Tungsten homeostasis
- By pathway - Molybdenum homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -117
Score: 4.6 Sequence: TGTGCACGTTTTCTGCTTGTTTCGTGACTG
Locus tag: DvMF_2780
Name: tupB Funciton: ABC-type tungstate transport system, periplasmic binding protein
Locus tag: DvMF_2781
Name: tupA Funciton: ABC-type tungstate transport system, permease protein
Locus tag: DvMF_2782
Name: tupC Funciton: ABC-type tungstate transport system, ATP-binding protein |
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tupB
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ABC-type tungstate transport system, periplasmic binding protein
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tupA
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ABC-type tungstate transport system, permease protein
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tupC
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ABC-type tungstate transport system, ATP-binding protein
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Position: -83
Score: 6 Sequence: CAGGCACGGCCTGCCGGAAAATCGTGACCG
Locus tag: DvMF_1233
Name: fdhE Funciton: formate dehydrogenase formation protein FdhE
Locus tag: DvMF_1232
Name: fdhD Funciton: Formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: DvMF_1231
Name: mobA Funciton: molybdopterin-guanine dinucleotide biosynthesis protein A, putative
Locus tag: DvMF_1230
Name: moaA Funciton: Molybdenum cofactor biosynthesis protein MoaA |
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fdhE
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formate dehydrogenase formation protein FdhE
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fdhD
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Formate dehydrogenase chain D (EC 1.2.1.2)
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mobA
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molybdopterin-guanine dinucleotide biosynthesis protein A, putative
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moaA
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Molybdenum cofactor biosynthesis protein MoaA
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Position: -96
Score: 5.9 Sequence: CAGTCACGCGAACCATGCCGGACGTGACCC
Locus tag: DvMF_0650
Name: modE Funciton: Molybdate-responsive transcriptional regulator ModE |
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modE
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Molybdate-responsive transcriptional regulator ModE
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Position: -145
Score: 4.9 Sequence: CGGTCACGATAATTTTATTTTGCATGGCTC
Locus tag: DvMF_2403
Name: null Funciton: Molybdate-binding domain of ModE |
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Molybdate-binding domain of ModE
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Position: -108
Score: 5.7 Sequence: CGGTCACCTGGGCTGTTTTTTTCGTGACTG
Locus tag: DvMF_2476
Name: TunR Funciton: XerD family transcriptional regulator |
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TunR
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XerD family transcriptional regulator
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Position: -235
Score: 5.7 Sequence: CAGTCACGAAAAAAACAGCCCAGGTGACCG
Locus tag: DvMF_2475
Name: null Funciton: COG1720: Uncharacterized conserved protein
Locus tag: DvMF_2474
Name: modA Funciton: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) |
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COG1720: Uncharacterized conserved protein
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modA
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Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
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Position: -335
Score: 5.6 Sequence: CGGGCACGATATGTCCTGCTTTCGTGCCTG
Position: -138
Score: 4.6 Sequence: TGGTCACGCGTGTATCGGAATGCGTGTTCC
Locus tag: DvMF_0320
Name: phsA Funciton: molybdopterin oxidoreductase
Locus tag: DvMF_0319
Name: phsB Funciton: 4Fe-4S ferredoxin, iron-sulfur binding domain protein |
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phsA
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molybdopterin oxidoreductase
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phsB
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4Fe-4S ferredoxin, iron-sulfur binding domain protein
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Position: -371
Score: 4.5 Sequence: CCTACACGCTTTGCATCCAACCCGTGACCA
Position: -243
Score: 5.6 Sequence: ATGTCACGCCAAGTCGCGCTTCCGTGACTG
Locus tag: DvMF_1613
Name: null Funciton: molybdopterin binding domain |
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molybdopterin binding domain
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Position: -67
Score: 5.4 Sequence: CGGTCACCAAGACGAAAGTTTTCGTGCCTC
Locus tag: DvMF_2478
Name: modB Funciton: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
Locus tag: DvMF_2477
Name: modC Funciton: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) |
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modB
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Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
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modC
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Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |