Regulon of NikR in Desulfovibrio vulgaris str. Miyazaki F

Properties
Regulator type:	Transcription factor
TF locus tag:	DvMF_1320
Regulator family:	NikR
Regulation mode:	repressor
Biological process:	Nickel homeostasis
Effector:	Nickel ion, (Ni2+)
Regulog:	NikR - Desulfovibrionales
Statistics of regulated genes:
- Genes	4
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By trascription factor - NikR
By TF family - NikR
By effector - Nickel ion, (Ni2+)
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -244 Score: 6.8 Sequence: GTAACAC-(13)-ATAACAC Locus tag: DvMF_0274 Name: hysB Funciton: [Ni/Fe] hydrogenase, group 1, small subunit Locus tag: DvMF_0273 Name: hysA Funciton: [Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing
	DvMF_0274	hysB	[Ni/Fe] hydrogenase, group 1, small subunit
	DvMF_0273	hysA	[Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing
Position: -265 Score: 5.4 Sequence: GCAACAC-(13)-GTGACCC Locus tag: DvMF_2398 Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
	DvMF_2398	nikD	Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Position: -89 Score: 6.8 Sequence: GTGACAC-(13)-GTGTAAC Locus tag: DvMF_2859 Name: nikK Funciton: Additional periplasmic component NikK of nickel ECF transporter
	DvMF_2859	nikK	Additional periplasmic component NikK of nickel ECF transporter

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