Regulon of NikR in Desulfovibrio vulgaris str. Miyazaki F
| Regulator type: | Transcription factor |
| TF locus tag: | DvMF_1320 |
| Regulator family: | NikR |
| Regulation mode: | repressor |
| Biological process: | Nickel homeostasis |
| Effector: | Nickel ion, (Ni2+) |
| Regulog: | NikR - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - NikR
- By TF family - NikR
- By effector - Nickel ion, (Ni2+)
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -244
Score: 6.8 Sequence: GTAACAC-(13)-ATAACAC
Locus tag: DvMF_0274
Name: hysB Funciton: [Ni/Fe] hydrogenase, group 1, small subunit
Locus tag: DvMF_0273
Name: hysA Funciton: [Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing |
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hysB
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[Ni/Fe] hydrogenase, group 1, small subunit
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hysA
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[Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing
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Position: -265
Score: 5.4 Sequence: GCAACAC-(13)-GTGACCC
Locus tag: DvMF_2398
Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
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nikD
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Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
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Position: -89
Score: 6.8 Sequence: GTGACAC-(13)-GTGTAAC
Locus tag: DvMF_2859
Name: nikK Funciton: Additional periplasmic component NikK of nickel ECF transporter |
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nikK
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Additional periplasmic component NikK of nickel ECF transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |