Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NikR in Desulfovibrio vulgaris str. Miyazaki F

Properties
Regulator type: Transcription factor
TF locus tag: DvMF_1320
Regulator family: NikR
Regulation mode: repressor
Biological process: Nickel homeostasis
Effector: Nickel ion, (Ni2+)
Regulog: NikR - Desulfovibrionales
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -244
Score: 6.8
Sequence: GTAACAC-(13)-ATAACAC
Locus tag: DvMF_0274
Name: hysB
Funciton: [Ni/Fe] hydrogenase, group 1, small subunit
Locus tag: DvMF_0273
Name: hysA
Funciton: [Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing
hysB
[Ni/Fe] hydrogenase, group 1, small subunit
hysA
[Ni/Fe] hydrogenase, group 1, large subunit; selenocysteine-containing

Position: -265
Score: 5.4
Sequence: GCAACAC-(13)-GTGACCC
Locus tag: DvMF_2398
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
nikD
Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)

Position: -89
Score: 6.8
Sequence: GTGACAC-(13)-GTGTAAC
Locus tag: DvMF_2859
Name: nikK
Funciton: Additional periplasmic component NikK of nickel ECF transporter
nikK
Additional periplasmic component NikK of nickel ECF transporter
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