Regulon of Cobalamin in Desulfovibrio vulgaris str. Miyazaki F

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	7
- Operons	2

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -372 Score: 26.9 Sequence: CAAAGGGAATCCGGT... Locus tag: DvMF_1473 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: DvMF_1472 Name: null Funciton: Hypothetical protein
	DvMF_1473	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	DvMF_1472		Hypothetical protein
Position: -382 Score: 95 Sequence: CTATCCATGAACCTT... Locus tag: DvMF_1496 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: DvMF_1497 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: DvMF_1498 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: DvMF_1499 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: DvMF_1500 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	DvMF_1496	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	DvMF_1497	btuC	Vitamin B12 ABC transporter, permease component BtuC
	DvMF_1498	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	DvMF_1499	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	DvMF_1500	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD