Regulog PdhR - Shewanellaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - PdhR
- By TF family - GntR/Others
- By effector - Pyruvate
- By pathway - Pyruvate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Shewanella oneidensis MR-1 | 9 | 4 |
| Shewanella putrefaciens CN-32 | 12 | 5 |
| Shewanella sp W3-18-1 | 12 | 5 |
| Shewanella sp ANA-3 | 12 | 5 |
| Shewanella sp MR-4 | 12 | 5 |
| Shewanella sp MR-7 | 12 | 5 |
| Shewanella baltica OS155 | 12 | 5 |
| Shewanella denitrificans OS217 | 9 | 4 |
| Shewanella frigidimarina NCIMB 400 | 12 | 5 |
| Shewanella amazonensis SB2B | 21 | 9 |
| Shewanella loihica PV-4 | 14 | 6 |
| Shewanella pealeana ATCC 700345 | 12 | 6 |
| Shewanella halifaxensis HAW-EB4 | 11 | 5 |
| Shewanella piezotolerans WP3 | 10 | 5 |
| Shewanella sediminis HAW-EB3 | 13 | 6 |
| Shewanella woodyi ATCC 51908 | 14 | 7 |
| Genes | Function | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||
| lldP |
Gene: SO_1522: L-lactate permease |
Gene: Sputcn32_1272: L-lactate permease |
Gene: Sputw3181_2834: L-lactate permease |
Gene: Shewana3_2904: L-lactate permease |
Gene: Shewmr4_2734: L-lactate permease |
Gene: Shewmr7_2807: L-lactate permease |
Gene: Sbal_1354: L-lactate permease |
Gene: Sden_2574: L-lactate permease |
Gene: Sfri_2793: L-lactate permease |
*
Shewanella amazonensis SB2B Site: position = -404 score = 5.95607 sequence = AATTGGTCTTACCAAAT Gene: Sama_2439: L-lactate permease |
*
Shewanella loihica PV-4 Site: position = -478 score = 5.72221 sequence = AATTGGTAATACCTATT Site: position = -218 score = 4.88242 sequence = AACTGGTCAGACAAAGT Gene: Shew_3135: L-lactate permease |
Gene: Spea_2994: L-lactate permease |
Gene: Shal_3083: L-lactate permease |
Gene: swp_1813: L-lactate permease |
Gene: Ssed_0907: L-lactate permease |
|
L-lactate permease |
| dld |
Gene: SO_1521: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sputcn32_1271: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sputw3181_2835: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewana3_2905: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewmr4_2735: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shewmr7_2808: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sbal_1353: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
|
Gene: Sfri_2794: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Sama_2440: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shew_3136: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Spea_2995: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Shal_3084: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: swp_1812: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
Gene: Ssed_0908: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
|
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing |
| CRON 2. | |||||||||||||||||
| oadG |
|
*
Shewanella putrefaciens CN-32 Site: position = -246 score = 5.5907 sequence = ACATGGTAAGACCAATT Gene: Sputcn32_1029: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp W3-18-1 Site: position = -246 score = 5.5907 sequence = ACATGGTAAGACCAATT Gene: Sputw3181_3136: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp ANA-3 Site: position = -111 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewana3_3166: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp MR-4 Site: position = -79 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewmr4_2987: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sp MR-7 Site: position = -110 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewmr7_3069: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella baltica OS155 Site: position = -251 score = 6.11277 sequence = TATTGGTAAGACCAATT Gene: Sbal_1024: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
|
*
Shewanella frigidimarina NCIMB 400 Site: position = -299 score = 5.68901 sequence = TTTTGGTAAGACCAATT Gene: Sfri_1065: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella amazonensis SB2B Site: position = -169 score = 6.11277 sequence = TATTGGTAAGACCAATT Gene: Sama_1051: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella loihica PV-4 Site: position = -202 score = 5.95607 sequence = ATTTGGTAAGACCAATT Gene: Shew_1219: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella pealeana ATCC 700345 Site: position = -195 score = 5.24752 sequence = TTATGGTATGACCAATT Gene: Spea_1198: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -196 score = 4.74683 sequence = TTATGGTACGACCAATT Gene: Shal_1235: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella piezotolerans WP3 Site: position = -258 score = 6.11277 sequence = TATTGGTATGACCAATT Gene: swp_1378: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella sediminis HAW-EB3 Site: position = -148 score = 6.11277 sequence = TATTGGTATGACCAATT Gene: Ssed_1320: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
*
Shewanella woodyi ATCC 51908 Site: position = -243 score = 5.68901 sequence = TTTTGGTATGACCAATT Gene: Swoo_3337: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) |
| oadA |
|
Gene: Sputcn32_1030: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Sputw3181_3135: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Shewana3_3165: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Shewmr4_2986: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Shewmr7_3068: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Sbal_1025: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
|
Gene: Sfri_1066: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Sama_1052: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Shew_1220: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Spea_1199: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Shal_1236: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: swp_1379: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Ssed_1321: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Gene: Swoo_3336: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) |
| oadB |
|
Gene: Sputcn32_1031: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Sputw3181_3134: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Shewana3_3164: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Shewmr4_2985: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Shewmr7_3067: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Sbal_1026: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
|
Gene: Sfri_1067: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Sama_1053: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Shew_1221: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Spea_1200: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Shal_1237: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: swp_1380: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Ssed_1322: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Gene: Swoo_3335: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
| CRON 3. | |||||||||||||||||
| deaD |
Gene: SO_4034: Cold-shock DEAD-box protein A |
Gene: Sputcn32_0637: Cold-shock DEAD-box protein A |
Gene: Sputw3181_3537: Cold-shock DEAD-box protein A |
Gene: Shewana3_3595: Cold-shock DEAD-box protein A |
Gene: Shewmr4_3424: Cold-shock DEAD-box protein A |
|
Gene: Sbal_3757: Cold-shock DEAD-box protein A |
Gene: Sden_3317: Cold-shock DEAD-box protein A |
Gene: Sfri_3714: Cold-shock DEAD-box protein A |
Gene: Sama_0512: Cold-shock DEAD-box protein A |
Gene: Shew_0531: Cold-shock DEAD-box protein A |
*
Shewanella pealeana ATCC 700345 Site: position = -142 score = 6.3265 sequence = AATTGGTATTACCAATT Gene: Spea_0566: Cold-shock DEAD-box protein A |
*
Shewanella halifaxensis HAW-EB4 Site: position = -142 score = 5.98855 sequence = GATTGGTATTACCAATT Gene: Shal_0628: Cold-shock DEAD-box protein A |
*
Shewanella piezotolerans WP3 Site: position = -141 score = 5.88501 sequence = AAATGGTAATACCAATT Gene: swp_4551: Cold-shock DEAD-box protein A |
*
Shewanella sediminis HAW-EB3 Site: position = -141 score = 6.3265 sequence = AATTGGTAATACCAATT Gene: Ssed_4029: Cold-shock DEAD-box protein A |
*
Shewanella woodyi ATCC 51908 Site: position = -143 score = 6.3265 sequence = AATTGGTAATACCAATT Gene: Swoo_0636: Cold-shock DEAD-box protein A |
Cold-shock DEAD-box protein A |
| CRON 4. | |||||||||||||||||
| pflX |
|
*
Shewanella putrefaciens CN-32 Site: position = -202 score = 6.43316 sequence = AATTGGTCAGACCAATT Gene: Sputcn32_2377: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella sp W3-18-1 Site: position = -202 score = 6.43316 sequence = AATTGGTCAGACCAATT Gene: Sputw3181_1632: pyruvate formate lyase-related hypothetical transporter |
|
|
|
|
*
Shewanella denitrificans OS217 Site: position = -180 score = 6.11277 sequence = AATTGGTCTTACCAATA Gene: Sden_2405: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella frigidimarina NCIMB 400 Site: position = -203 score = 5.76513 sequence = AATTGGTCTTACCAAGA Gene: Sfri_2472: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella amazonensis SB2B Site: position = -180 score = 6.37983 sequence = AATTGGTATGACCAATT Gene: Sama_1499: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella loihica PV-4 Site: position = -205 score = 6.43316 sequence = AATTGGTCAGACCAATT Gene: Shew_2389: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella pealeana ATCC 700345 Site: position = -215 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Spea_1673: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella halifaxensis HAW-EB4 Site: position = -216 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shal_2591: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella piezotolerans WP3 Site: position = -215 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: swp_1953: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella sediminis HAW-EB3 Site: position = -215 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Ssed_1709: pyruvate formate lyase-related hypothetical transporter |
*
Shewanella woodyi ATCC 51908 Site: position = -214 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Swoo_2882: pyruvate formate lyase-related hypothetical transporter |
pyruvate formate lyase-related hypothetical transporter |
| CRON 5. | |||||||||||||||||
| ppc |
Gene: SO_0274: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Sputcn32_3718: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Sputw3181_3861: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Shewana3_3906: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Shewmr4_3710: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Shewmr7_0235: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Sbal_4125: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Sden_0248: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Sfri_0189: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
*
Shewanella amazonensis SB2B Site: position = -114 score = 5.82887 sequence = AATTGGACTGACCAATT Gene: Sama_0254: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Shew_0200: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Spea_0225: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Shal_4095: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: swp_2053: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Ssed_4278: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Gene: Swoo_0327: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
| SO0273 |
Gene: SO_0273: protein of unknown function DUF1439 |
Gene: Sputcn32_3719: protein of unknown function DUF1439 |
Gene: Sputw3181_3862: protein of unknown function DUF1439 |
Gene: Shewana3_3907: protein of unknown function DUF1439 |
Gene: Shewmr4_3711: protein of unknown function DUF1439 |
Gene: Shewmr7_0234: protein of unknown function DUF1439 |
Gene: Sbal_4126: protein of unknown function DUF1439 |
Gene: Sden_0247: protein of unknown function DUF1439 |
Gene: Sfri_0188: protein of unknown function DUF1439 |
Gene: Sama_0253: protein of unknown function DUF1439 |
Gene: Shew_0199: protein of unknown function DUF1439 |
Gene: Spea_0224: protein of unknown function DUF1439 |
Gene: Shal_4096: protein of unknown function DUF1439 |
Gene: swp_2052: protein of unknown function DUF1439 |
Gene: Ssed_4279: protein of unknown function DUF1439 |
Gene: Swoo_0326: protein of unknown function DUF1439 |
protein of unknown function DUF1439 |
| CRON 6. | |||||||||||||||||
| pflB |
*
Shewanella oneidensis MR-1 Site: position = -247 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: SO_2912: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella putrefaciens CN-32 Site: position = -256 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Sputcn32_2378: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella sp W3-18-1 Site: position = -256 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Sputw3181_1631: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella sp ANA-3 Site: position = -246 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewana3_1555: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella sp MR-4 Site: position = -246 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewmr4_1494: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella sp MR-7 Site: position = -246 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shewmr7_1561: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella baltica OS155 Site: position = -245 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Sbal_2671: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella denitrificans OS217 Site: position = -165 score = 6.11277 sequence = AATTGGTCTTACCAATA Gene: Sden_2406: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -216 score = 5.93834 sequence = AATTGGTCTTACCATTT Gene: Sfri_2473: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella amazonensis SB2B Site: position = -163 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Sama_1498: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella loihica PV-4 Site: position = -242 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shew_2390: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella pealeana ATCC 700345 Site: position = -229 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Spea_1672: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella halifaxensis HAW-EB4 Site: position = -238 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Shal_2592: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella piezotolerans WP3 Site: position = -222 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: swp_1952: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella sediminis HAW-EB3 Site: position = -240 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Ssed_1708: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Shewanella woodyi ATCC 51908 Site: position = -235 score = 6.37983 sequence = AATTGGTCTTACCAATT Gene: Swoo_2883: Pyruvate formate-lyase (EC 2.3.1.54) |
Pyruvate formate-lyase (EC 2.3.1.54) |
| pflA |
Gene: SO_2913: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sputcn32_2379: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sputw3181_1630: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Shewana3_1554: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Shewmr4_1493: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Shewmr7_1560: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sbal_2672: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sden_2407: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sfri_2474: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Sama_1497: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Shew_2391: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Spea_1671: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Shal_2593: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: swp_1951: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Ssed_1707: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Swoo_2884: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| CRON 7. | |||||||||||||||||
| pdhR |
*
Shewanella oneidensis MR-1 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -175 score = 4.52151 sequence = TAATGGTCTGACCCCTT Gene: SO_0423: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella putrefaciens CN-32 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -194 score = 4.36481 sequence = AAATGGTCTGACCCCAT Gene: Sputcn32_3418: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella sp W3-18-1 Site: position = -194 score = 4.36481 sequence = AAATGGTCTGACCCCAT Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Sputw3181_0525: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella sp ANA-3 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Shewana3_0425: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella sp MR-4 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -175 score = 4.36481 sequence = AAATGGTCTGACCCCAT Gene: Shewmr4_0427: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella sp MR-7 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -175 score = 4.36481 sequence = AAATGGTCTGACCCCAT Gene: Shewmr7_3600: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella baltica OS155 Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -175 score = 4.36481 sequence = AAATGGTCTGACCCCAT Gene: Sbal_3914: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella denitrificans OS217 Site: position = -185 score = 4.78857 sequence = AAATGGTCTGACCCCTT Site: position = -38 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Sden_3384: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella frigidimarina NCIMB 400 Site: position = -49 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -186 score = 4.78857 sequence = AAATGGTCTGACCCCTT Gene: Sfri_3778: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella amazonensis SB2B Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -152 score = 4.8063 sequence = AATTGGTCTGACCCCAT Gene: Sama_0374: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella loihica PV-4 Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Shew_3432: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella pealeana ATCC 700345 Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -158 score = 4.2349 sequence = CATTGGTCAGACCCCAT Gene: Spea_0418: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella halifaxensis HAW-EB4 Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -157 score = 4.3916 sequence = CATTGGTCTGACCCCTA Gene: Shal_0475: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella piezotolerans WP3 Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -158 score = 4.2349 sequence = CATTGGTCTGACCCCAT Gene: swp_4753: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella sediminis HAW-EB3 Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Site: position = -158 score = 4.52151 sequence = TAATGGTCAGACCCCTT Gene: Ssed_0430: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
*
Shewanella woodyi ATCC 51908 Site: position = -159 score = 4.25445 sequence = TAATGGTCTGACCGCTA Site: position = -39 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Swoo_0318: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family |
| aceE |
Gene: SO_0424: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sputcn32_3417: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sputw3181_0526: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Shewana3_0426: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Shewmr4_0428: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Shewmr7_3599: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sbal_3913: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sden_3383: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sfri_3777: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Sama_0375: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Shew_3431: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Spea_0419: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Shal_0476: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: swp_4752: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Ssed_0431: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Swoo_0319: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
| aceF |
Gene: SO_0425: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sputcn32_3416: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sputw3181_0527: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Shewana3_0427: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Shewmr4_0429: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Shewmr7_3598: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sbal_3912: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sden_3382: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sfri_3776: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Sama_0376: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Shew_3430: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Spea_0420: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Shal_0477: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: swp_4751: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Ssed_0432: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Swoo_0320: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
| lpdA |
Gene: SO_0426: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sputcn32_3415: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sputw3181_0528: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Shewana3_0428: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Shewmr4_0430: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Shewmr7_3597: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sbal_3911: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sden_3381: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sfri_3775: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Sama_0377: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Shew_3429: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Spea_0421: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Shal_0478: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: swp_4749: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Ssed_0433: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Gene: Swoo_0321: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
| CRON 8. | |||||||||||||||||
| aceB |
*
Shewanella oneidensis MR-1 Site: position = -214 score = 5.74234 sequence = TGTTGGTCAGACCAATT Site: position = -306 score = 4.62577 sequence = AAGTTGTCTGACAAATT Gene: SO_1483: Malate synthase (EC 2.3.3.9) |
*
Shewanella putrefaciens CN-32 Site: position = -145 score = 5.67145 sequence = GTTTGGTCTGACCAATT Gene: Sputcn32_1238: Malate synthase (EC 2.3.3.9) |
*
Shewanella sp W3-18-1 Site: position = -144 score = 5.67145 sequence = GTTTGGTCTGACCAATT Gene: Sputw3181_2866: Malate synthase (EC 2.3.3.9) |
*
Shewanella sp ANA-3 Site: position = -214 score = 5.81846 sequence = TCTTGGTCAGACCAATT Site: position = -306 score = 4.62577 sequence = AAGTTGTCTGACAAATT Gene: Shewana3_2943: Malate synthase (EC 2.3.3.9) |
*
Shewanella sp MR-4 Site: position = -306 score = 4.62577 sequence = AAGTTGTCTGACAAATT Site: position = -214 score = 5.81846 sequence = TCTTGGTCAGACCAATT Gene: Shewmr4_2767: Malate synthase (EC 2.3.3.9) |
*
Shewanella sp MR-7 Site: position = -306 score = 4.62577 sequence = AAGTTGTCTGACAAATT Site: position = -214 score = 5.81846 sequence = TCTTGGTCAGACCAATT Gene: Shewmr7_2845: Malate synthase (EC 2.3.3.9) |
*
Shewanella baltica OS155 Site: position = -221 score = 5.74757 sequence = GCTTGGTCAGACCAATT Gene: Sbal_1316: Malate synthase (EC 2.3.3.9) |
*
Shewanella denitrificans OS217 Site: position = -258 score = 5.46079 sequence = CCTTGGTCATACCAATT Site: position = -166 score = 5.69424 sequence = GCTTGGTCTTACCAATT Gene: Sden_1245: Malate synthase (EC 2.3.3.9) |
*
Shewanella frigidimarina NCIMB 400 Site: position = -299 score = 5.24752 sequence = TGTTGGTAAGACCATTT Gene: Sfri_1101: Malate synthase (EC 2.3.3.9) |
*
Shewanella amazonensis SB2B Site: position = -298 score = 5.08471 sequence = TGTTGGTAAGACAAATT Site: position = -205 score = 5.67145 sequence = GTTTGGTCTGACCAATT Gene: Sama_2381: Malate synthase (EC 2.3.3.9) |
*
Shewanella loihica PV-4 Site: position = -233 score = 5.61811 sequence = GTTTGGTCTTACCAATT Gene: Shew_1275: Malate synthase (EC 2.3.3.9) |
*
Shewanella pealeana ATCC 700345 Site: position = -349 score = 4.57243 sequence = AATTTGTCTTACAAGTT Gene: Spea_1290: Malate synthase (EC 2.3.3.9) |
Gene: Shal_1352: Malate synthase (EC 2.3.3.9) |
Gene: swp_1433: Malate synthase (EC 2.3.3.9) |
*
Shewanella sediminis HAW-EB3 Site: position = -215 score = 5.60039 sequence = GATTGGTCATACCATTT Site: position = -305 score = 4.65318 sequence = CATTTGTCTGACAAATT Gene: Ssed_1414: Malate synthase (EC 2.3.3.9) |
*
Shewanella woodyi ATCC 51908 Site: position = -335 score = 5.22458 sequence = AATTTGTCTGACAAATT Gene: Swoo_1528: Malate synthase (EC 2.3.3.9) |
Malate synthase (EC 2.3.3.9) |
| aceA |
Gene: SO_1484: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sputcn32_1239: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sputw3181_2865: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewana3_2942: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewmr4_2766: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shewmr7_2844: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sbal_1317: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sden_1246: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sfri_1102: Isocitrate lyase (EC 4.1.3.1) |
Gene: Sama_2380: Isocitrate lyase (EC 4.1.3.1) |
Gene: Shew_1276: Isocitrate lyase (EC 4.1.3.1) |
|
|
|
Gene: Ssed_1415: Isocitrate lyase (EC 4.1.3.1) |
|
Isocitrate lyase (EC 4.1.3.1) |
| CRON 9. | |||||||||||||||||
| Swoo_2881 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
*
Shewanella woodyi ATCC 51908 Site: position = -351 score = 6.37983 sequence = AATTGGTAAGACCAATT Gene: Swoo_2881: hypothetical protein |
hypothetical protein |
| focA |
*
Shewanella oneidensis MR-1 Site: position = -280 score = 6.37983 sequence = AATTGGTATGACCAATT Gene: SO_2911: formate transporter |
Gene: Sputcn32_2376: formate transporter |
Gene: Sputw3181_1633: formate transporter |
*
Shewanella sp ANA-3 Site: position = -253 score = 6.37983 sequence = AATTGGTATGACCAATT Gene: Shewana3_1556: formate transporter |
*
Shewanella sp MR-4 Site: position = -254 score = 6.37983 sequence = AATTGGTATGACCAATT Gene: Shewmr4_1495: formate transporter |
*
Shewanella sp MR-7 Site: position = -254 score = 6.37983 sequence = AATTGGTATGACCAATT Gene: Shewmr7_1562: formate transporter |
*
Shewanella baltica OS155 Site: position = -254 score = 6.11277 sequence = TATTGGTAAGACCAATT Gene: Sbal_2670: formate transporter |
|
Gene: Sfri_2470: formate transporter |
Gene: Sama_1500: formate transporter |
Gene: Shew_2388: formate transporter |
Gene: Spea_1674: formate transporter |
Gene: Shal_2590: formate transporter |
Gene: swp_1954: formate transporter |
Gene: Ssed_1710: formate transporter |
Gene: Swoo_2880: formate transporter |
formate transporter |
| CRON 10. | |||||||||||||||||
| sdhC |
Gene: SO_1927: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Sputcn32_2273: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Sputw3181_1735: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Shewana3_1706: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Shewmr4_1631: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Shewmr7_1706: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Sbal_2519: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Sden_2187: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Sfri_2347: succinate dehydrogenase, cytochrome b556 subunit |
*
Shewanella amazonensis SB2B Site: position = -293 score = 5.56181 sequence = TATAGGTCTGACCAATT Gene: Sama_1423: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Shew_1651: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Spea_1784: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Shal_2493: succinate dehydrogenase, cytochrome b556 subunit |
Gene: swp_2955: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Ssed_2818: succinate dehydrogenase, cytochrome b556 subunit |
Gene: Swoo_1833: succinate dehydrogenase, cytochrome b556 subunit |
succinate dehydrogenase, cytochrome b556 subunit |
| sdhD |
Gene: SO_1927.1: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sputcn32_2272: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sputw3181_1736: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Shewana3_1707: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Shewmr4_1632: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Shewmr7_1707: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sbal_2518: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sden_2186: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sfri_2346: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Sama_1424: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Shew_1652: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Spea_1785: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Shal_2492: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: swp_2953: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Ssed_2817: succinate dehydrogenase, hydrophobic membrane anchor protein |
Gene: Swoo_1834: succinate dehydrogenase, hydrophobic membrane anchor protein |
succinate dehydrogenase, hydrophobic membrane anchor protein |
| sdhA |
Gene: SO_1928: succinate dehydrogenase, flavoprotein subunit |
Gene: Sputcn32_2271: succinate dehydrogenase, flavoprotein subunit |
Gene: Sputw3181_1737: succinate dehydrogenase, flavoprotein subunit |
Gene: Shewana3_1708: succinate dehydrogenase, flavoprotein subunit |
Gene: Shewmr4_1633: succinate dehydrogenase, flavoprotein subunit |
Gene: Shewmr7_1708: succinate dehydrogenase, flavoprotein subunit |
Gene: Sbal_2517: succinate dehydrogenase, flavoprotein subunit |
Gene: Sden_2185: succinate dehydrogenase, flavoprotein subunit |
Gene: Sfri_2345: succinate dehydrogenase, flavoprotein subunit |
Gene: Sama_1425: succinate dehydrogenase, flavoprotein subunit |
Gene: Shew_1653: succinate dehydrogenase, flavoprotein subunit |
Gene: Spea_1786: succinate dehydrogenase, flavoprotein subunit |
Gene: Shal_2491: succinate dehydrogenase, flavoprotein subunit |
Gene: swp_2952: succinate dehydrogenase, flavoprotein subunit |
Gene: Ssed_2816: succinate dehydrogenase, flavoprotein subunit |
Gene: Swoo_1835: succinate dehydrogenase, flavoprotein subunit |
succinate dehydrogenase, flavoprotein subunit |
| sdhB |
Gene: SO_1929: succinate dehydrogenase, iron-sulfur protein |
Gene: Sputcn32_2270: succinate dehydrogenase, iron-sulfur protein |
Gene: Sputw3181_1738: succinate dehydrogenase, iron-sulfur protein |
Gene: Shewana3_1709: succinate dehydrogenase, iron-sulfur protein |
Gene: Shewmr4_1634: succinate dehydrogenase, iron-sulfur protein |
Gene: Shewmr7_1709: succinate dehydrogenase, iron-sulfur protein |
Gene: Sbal_2516: succinate dehydrogenase, iron-sulfur protein |
Gene: Sden_2184: succinate dehydrogenase, iron-sulfur protein |
Gene: Sfri_2344: succinate dehydrogenase, iron-sulfur protein |
Gene: Sama_1426: succinate dehydrogenase, iron-sulfur protein |
Gene: Shew_1654: succinate dehydrogenase, iron-sulfur protein |
Gene: Spea_1787: succinate dehydrogenase, iron-sulfur protein |
Gene: Shal_2490: succinate dehydrogenase, iron-sulfur protein |
Gene: swp_2950: succinate dehydrogenase, iron-sulfur protein |
Gene: Ssed_2815: succinate dehydrogenase, iron-sulfur protein |
Gene: Swoo_1836: succinate dehydrogenase, iron-sulfur protein |
succinate dehydrogenase, iron-sulfur protein |
| CRON 11. | |||||||||||||||||
| gltA |
Gene: SO_1926: citrate synthase |
Gene: Sputcn32_2274: citrate synthase |
Gene: Sputw3181_1734: citrate synthase |
Gene: Shewana3_1705: citrate synthase |
Gene: Shewmr4_1630: citrate synthase |
Gene: Shewmr7_1705: citrate synthase |
Gene: Sbal_2520: citrate synthase |
Gene: Sden_2189: citrate synthase |
Gene: Sfri_2348: citrate synthase |
*
Shewanella amazonensis SB2B Site: position = -136 score = 5.56181 sequence = AATTGGTCAGACCTATA Gene: Sama_1422: citrate synthase |
Gene: Shew_1650: citrate synthase |
Gene: Spea_1783: citrate synthase |
Gene: Shal_2494: citrate synthase |
Gene: swp_2957: citrate synthase |
Gene: Ssed_2819: citrate synthase |
Gene: Swoo_1832: citrate synthase |
citrate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |