Regulon of PdhR in Shewanella pealeana ATCC 700345

Properties
Regulator type:	Transcription factor
TF locus tag:	Spea_0418
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -142 Score: 6.3 Sequence: AATTGGTATTACCAATT Locus tag: Spea_0566 Name: deaD Funciton: Cold-shock DEAD-box protein A
	Spea_0566	deaD	Cold-shock DEAD-box protein A
Position: -349 Score: 4.6 Sequence: AATTTGTCTTACAAGTT Locus tag: Spea_1290 Name: aceB Funciton: Malate synthase (EC 2.3.3.9)
	Spea_1290	aceB	Malate synthase (EC 2.3.3.9)
Position: -158 Score: 4.2 Sequence: CATTGGTCAGACCCCAT Position: -39 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: Spea_0418 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: Spea_0419 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: Spea_0420 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: Spea_0421 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	Spea_0418	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	Spea_0419	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	Spea_0420	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	Spea_0421	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -195 Score: 5.2 Sequence: TTATGGTATGACCAATT Locus tag: Spea_1198 Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Locus tag: Spea_1199 Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Locus tag: Spea_1200 Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
	Spea_1198	oadG	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
	Spea_1199	oadA	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
	Spea_1200	oadB	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Position: -229 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Spea_1672 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Spea_1671 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Spea_1672	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Spea_1671	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -215 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Spea_1673 Name: pflX Funciton: pyruvate formate lyase-related hypothetical transporter
	Spea_1673	pflX	pyruvate formate lyase-related hypothetical transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD