Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator PdhR in Shewanellaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Regulog: PdhR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_0423 pdhR -38 6.4 AATTGGTAAGACCAATT
SO_0423 pdhR -175 4.5 TAATGGTCTGACCCCTT
SO_2912 pflB -247 6.4 AATTGGTCTTACCAATT
SO_1483 aceB -214 5.7 TGTTGGTCAGACCAATT
SO_2911 focA -280 6.4 AATTGGTATGACCAATT
SO_1483 aceB -306 4.6 AAGTTGTCTGACAAATT
Shewanella putrefaciens CN-32
Sputcn32_1029 oadG -246 5.6 ACATGGTAAGACCAATT
Sputcn32_2378 pflB -256 6.4 AATTGGTCTTACCAATT
Sputcn32_2377 pflX -202 6.4 AATTGGTCAGACCAATT
Sputcn32_1238 aceB -145 5.7 GTTTGGTCTGACCAATT
Sputcn32_3418 pdhR -38 6.4 AATTGGTAAGACCAATT
Sputcn32_3418 pdhR -194 4.4 AAATGGTCTGACCCCAT
Shewanella sp W3-18-1
Sputw3181_3136 oadG -246 5.6 ACATGGTAAGACCAATT
Sputw3181_1632 pflX -202 6.4 AATTGGTCAGACCAATT
Sputw3181_1631 pflB -256 6.4 AATTGGTCTTACCAATT
Sputw3181_2866 aceB -144 5.7 GTTTGGTCTGACCAATT
Sputw3181_0525 pdhR -194 4.4 AAATGGTCTGACCCCAT
Sputw3181_0525 pdhR -38 6.4 AATTGGTAAGACCAATT
Shewanella sp ANA-3
Shewana3_3166 oadG -111 6.4 AATTGGTCTTACCAATT
Shewana3_1555 pflB -246 6.4 AATTGGTCTTACCAATT
Shewana3_1556 focA -253 6.4 AATTGGTATGACCAATT
Shewana3_2943 aceB -214 5.8 TCTTGGTCAGACCAATT
Shewana3_2943 aceB -306 4.6 AAGTTGTCTGACAAATT
Shewana3_0425 pdhR -38 6.4 AATTGGTAAGACCAATT
Shewanella sp MR-4
Shewmr4_2987 oadG -79 6.4 AATTGGTCTTACCAATT
Shewmr4_0427 pdhR -38 6.4 AATTGGTAAGACCAATT
Shewmr4_0427 pdhR -175 4.4 AAATGGTCTGACCCCAT
Shewmr4_1494 pflB -246 6.4 AATTGGTCTTACCAATT
Shewmr4_2767 aceB -306 4.6 AAGTTGTCTGACAAATT
Shewmr4_1495 focA -254 6.4 AATTGGTATGACCAATT
Shewmr4_2767 aceB -214 5.8 TCTTGGTCAGACCAATT
Shewanella sp MR-7
Shewmr7_3069 oadG -110 6.4 AATTGGTCTTACCAATT
Shewmr7_3600 pdhR -38 6.4 AATTGGTAAGACCAATT
Shewmr7_3600 pdhR -175 4.4 AAATGGTCTGACCCCAT
Shewmr7_1561 pflB -246 6.4 AATTGGTCTTACCAATT
Shewmr7_1562 focA -254 6.4 AATTGGTATGACCAATT
Shewmr7_2845 aceB -306 4.6 AAGTTGTCTGACAAATT
Shewmr7_2845 aceB -214 5.8 TCTTGGTCAGACCAATT
Shewanella baltica OS155
Sbal_1024 oadG -251 6.1 TATTGGTAAGACCAATT
Sbal_3914 pdhR -38 6.4 AATTGGTAAGACCAATT
Sbal_3914 pdhR -175 4.4 AAATGGTCTGACCCCAT
Sbal_2670 focA -254 6.1 TATTGGTAAGACCAATT
Sbal_2671 pflB -245 6.4 AATTGGTCTTACCAATT
Sbal_1316 aceB -221 5.7 GCTTGGTCAGACCAATT
Shewanella denitrificans OS217
Sden_2406 pflB -165 6.1 AATTGGTCTTACCAATA
Sden_1245 aceB -258 5.5 CCTTGGTCATACCAATT
Sden_1245 aceB -166 5.7 GCTTGGTCTTACCAATT
Sden_2405 pflX -180 6.1 AATTGGTCTTACCAATA
Sden_3384 pdhR -185 4.8 AAATGGTCTGACCCCTT
Sden_3384 pdhR -38 6.4 AATTGGTAAGACCAATT
Shewanella frigidimarina NCIMB 400
Sfri_1065 oadG -299 5.7 TTTTGGTAAGACCAATT
Sfri_2473 pflB -216 5.9 AATTGGTCTTACCATTT
Sfri_2472 pflX -203 5.8 AATTGGTCTTACCAAGA
Sfri_1101 aceB -299 5.2 TGTTGGTAAGACCATTT
Sfri_3778 pdhR -49 6.4 AATTGGTAAGACCAATT
Sfri_3778 pdhR -186 4.8 AAATGGTCTGACCCCTT
Shewanella amazonensis SB2B
Sama_0254 ppc -114 5.8 AATTGGACTGACCAATT
Sama_1499 pflX -180 6.4 AATTGGTATGACCAATT
Sama_2439 lldP -404 6 AATTGGTCTTACCAAAT
Sama_1051 oadG -169 6.1 TATTGGTAAGACCAATT
Sama_0374 pdhR -39 6.4 AATTGGTAAGACCAATT
Sama_0374 pdhR -152 4.8 AATTGGTCTGACCCCAT
Sama_1423 sdhC -293 5.6 TATAGGTCTGACCAATT
Sama_1422 gltA -136 5.6 AATTGGTCAGACCTATA
Sama_1498 pflB -163 6.4 AATTGGTCTTACCAATT
Sama_2381 aceB -298 5.1 TGTTGGTAAGACAAATT
Sama_2381 aceB -205 5.7 GTTTGGTCTGACCAATT
Shewanella loihica PV-4
Shew_1219 oadG -202 6 ATTTGGTAAGACCAATT
Shew_3135 lldP -478 5.7 AATTGGTAATACCTATT
Shew_3135 lldP -218 4.9 AACTGGTCAGACAAAGT
Shew_3432 pdhR -39 6.4 AATTGGTAAGACCAATT
Shew_2390 pflB -242 6.4 AATTGGTCTTACCAATT
Shew_2389 pflX -205 6.4 AATTGGTCAGACCAATT
Shew_1275 aceB -233 5.6 GTTTGGTCTTACCAATT
Shewanella pealeana ATCC 700345
Spea_0566 deaD -142 6.3 AATTGGTATTACCAATT
Spea_1198 oadG -195 5.2 TTATGGTATGACCAATT
Spea_0418 pdhR -39 6.4 AATTGGTAAGACCAATT
Spea_0418 pdhR -158 4.2 CATTGGTCAGACCCCAT
Spea_1672 pflB -229 6.4 AATTGGTCTTACCAATT
Spea_1673 pflX -215 6.4 AATTGGTCTTACCAATT
Spea_1290 aceB -349 4.6 AATTTGTCTTACAAGTT
Shewanella halifaxensis HAW-EB4
Shal_0628 deaD -142 6 GATTGGTATTACCAATT
Shal_1235 oadG -196 4.7 TTATGGTACGACCAATT
Shal_0475 pdhR -39 6.4 AATTGGTAAGACCAATT
Shal_0475 pdhR -157 4.4 CATTGGTCTGACCCCTA
Shal_2592 pflB -238 6.4 AATTGGTCTTACCAATT
Shal_2591 pflX -216 6.4 AATTGGTCTTACCAATT
Shewanella piezotolerans WP3
swp_1378 oadG -258 6.1 TATTGGTATGACCAATT
swp_4551 deaD -141 5.9 AAATGGTAATACCAATT
swp_4753 pdhR -39 6.4 AATTGGTAAGACCAATT
swp_4753 pdhR -158 4.2 CATTGGTCTGACCCCAT
swp_1952 pflB -222 6.4 AATTGGTCTTACCAATT
swp_1953 pflX -215 6.4 AATTGGTCTTACCAATT
Shewanella sediminis HAW-EB3
Ssed_4029 deaD -141 6.3 AATTGGTAATACCAATT
Ssed_1320 oadG -148 6.1 TATTGGTATGACCAATT
Ssed_0430 pdhR -39 6.4 AATTGGTAAGACCAATT
Ssed_0430 pdhR -158 4.5 TAATGGTCAGACCCCTT
Ssed_1709 pflX -215 6.4 AATTGGTCTTACCAATT
Ssed_1414 aceB -215 5.6 GATTGGTCATACCATTT
Ssed_1708 pflB -240 6.4 AATTGGTCTTACCAATT
Ssed_1414 aceB -305 4.7 CATTTGTCTGACAAATT
Shewanella woodyi ATCC 51908
Swoo_0636 deaD -143 6.3 AATTGGTAATACCAATT
Swoo_3337 oadG -243 5.7 TTTTGGTATGACCAATT
Swoo_2882 pflX -214 6.4 AATTGGTCTTACCAATT
Swoo_2883 pflB -235 6.4 AATTGGTCTTACCAATT
Swoo_2881 null -351 6.4 AATTGGTAAGACCAATT
Swoo_1528 aceB -335 5.2 AATTTGTCTGACAAATT
Swoo_0318 pdhR -159 4.3 TAATGGTCTGACCGCTA
Swoo_0318 pdhR -39 6.4 AATTGGTAAGACCAATT
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