Regulon of PdhR in Shewanella denitrificans OS217

Properties
Regulator type:	Transcription factor
TF locus tag:	Sden_3384
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 6.1 Sequence: AATTGGTCTTACCAATA Locus tag: Sden_2405 Name: pflX Funciton: pyruvate formate lyase-related hypothetical transporter
	Sden_2405	pflX	pyruvate formate lyase-related hypothetical transporter
Position: -185 Score: 4.8 Sequence: AAATGGTCTGACCCCTT Position: -38 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: Sden_3384 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: Sden_3383 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: Sden_3382 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: Sden_3381 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	Sden_3384	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	Sden_3383	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	Sden_3382	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	Sden_3381	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -165 Score: 6.1 Sequence: AATTGGTCTTACCAATA Locus tag: Sden_2406 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Sden_2407 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Sden_2406	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Sden_2407	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -258 Score: 5.5 Sequence: CCTTGGTCATACCAATT Position: -166 Score: 5.7 Sequence: GCTTGGTCTTACCAATT Locus tag: Sden_1245 Name: aceB Funciton: Malate synthase (EC 2.3.3.9) Locus tag: Sden_1246 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Sden_1245	aceB	Malate synthase (EC 2.3.3.9)
	Sden_1246	aceA	Isocitrate lyase (EC 4.1.3.1)

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