Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PdhR in Shewanella denitrificans OS217

Properties
Regulator type: Transcription factor
TF locus tag: Sden_3384
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Regulog: PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -180
Score: 6.1
Sequence: AATTGGTCTTACCAATA
Locus tag: Sden_2405
Name: pflX
Funciton: pyruvate formate lyase-related hypothetical transporter
pflX
pyruvate formate lyase-related hypothetical transporter

Position: -185
Score: 4.8
Sequence: AAATGGTCTGACCCCTT
Position: -38
Score: 6.4
Sequence: AATTGGTAAGACCAATT
Locus tag: Sden_3384
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: Sden_3383
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Sden_3382
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: Sden_3381
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)

Position: -165
Score: 6.1
Sequence: AATTGGTCTTACCAATA
Locus tag: Sden_2406
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Sden_2407
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -258
Score: 5.5
Sequence: CCTTGGTCATACCAATT
Position: -166
Score: 5.7
Sequence: GCTTGGTCTTACCAATT
Locus tag: Sden_1245
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sden_1246
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB
Malate synthase (EC 2.3.3.9)
aceA
Isocitrate lyase (EC 4.1.3.1)
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