Regulon of PdhR in Shewanella baltica OS155
| Regulator type: | Transcription factor |
| TF locus tag: | Sbal_3914 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Regulog: | PdhR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - PdhR
- By TF family - GntR/Others
- By effector - Pyruvate
- By pathway - Pyruvate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -251
Score: 6.1 Sequence: TATTGGTAAGACCAATT
Locus tag: Sbal_1024
Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sbal_1025
Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Locus tag: Sbal_1026
Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
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oadG
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Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
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oadA
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Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
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oadB
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Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
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Position: -245
Score: 6.4 Sequence: AATTGGTCTTACCAATT
Locus tag: Sbal_2671
Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Sbal_2672
Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
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pflB
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Pyruvate formate-lyase (EC 2.3.1.54)
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pflA
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Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
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Position: -221
Score: 5.7 Sequence: GCTTGGTCAGACCAATT
Locus tag: Sbal_1316
Name: aceB Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sbal_1317
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) |
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aceB
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Malate synthase (EC 2.3.3.9)
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aceA
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Isocitrate lyase (EC 4.1.3.1)
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Position: -175
Score: 4.4 Sequence: AAATGGTCTGACCCCAT
Position: -38
Score: 6.4 Sequence: AATTGGTAAGACCAATT
Locus tag: Sbal_3914
Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: Sbal_3913
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Sbal_3912
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: Sbal_3911
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
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pdhR
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Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
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aceE
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Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
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aceF
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Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
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lpdA
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Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
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Position: -254
Score: 6.1 Sequence: TATTGGTAAGACCAATT
Locus tag: Sbal_2670
Name: focA Funciton: formate transporter |
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focA
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formate transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |