Regulon of PdhR in Shewanella frigidimarina NCIMB 400

Properties
Regulator type:	Transcription factor
TF locus tag:	Sfri_3778
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -203 Score: 5.8 Sequence: AATTGGTCTTACCAAGA Locus tag: Sfri_2472 Name: pflX Funciton: pyruvate formate lyase-related hypothetical transporter
	Sfri_2472	pflX	pyruvate formate lyase-related hypothetical transporter
Position: -299 Score: 5.2 Sequence: TGTTGGTAAGACCATTT Locus tag: Sfri_1101 Name: aceB Funciton: Malate synthase (EC 2.3.3.9) Locus tag: Sfri_1102 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Sfri_1101	aceB	Malate synthase (EC 2.3.3.9)
	Sfri_1102	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -186 Score: 4.8 Sequence: AAATGGTCTGACCCCTT Position: -49 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: Sfri_3778 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: Sfri_3777 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: Sfri_3776 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: Sfri_3775 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	Sfri_3778	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	Sfri_3777	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	Sfri_3776	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	Sfri_3775	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -299 Score: 5.7 Sequence: TTTTGGTAAGACCAATT Locus tag: Sfri_1065 Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Locus tag: Sfri_1066 Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Locus tag: Sfri_1067 Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
	Sfri_1065	oadG	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
	Sfri_1066	oadA	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
	Sfri_1067	oadB	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Position: -216 Score: 5.9 Sequence: AATTGGTCTTACCATTT Locus tag: Sfri_2473 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Sfri_2474 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Sfri_2473	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Sfri_2474	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD