Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PdhR in Shewanella loihica PV-4

Properties
Regulator type: Transcription factor
TF locus tag: Shew_3432
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Regulog: PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes 14
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -478
Score: 5.7
Sequence: AATTGGTAATACCTATT
Position: -218
Score: 4.9
Sequence: AACTGGTCAGACAAAGT
Locus tag: Shew_3135
Name: lldP
Funciton: L-lactate permease
Locus tag: Shew_3136
Name: dld
Funciton: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Shew_3135
lldP
L-lactate permease
Shew_3136
dld
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Position: -233
Score: 5.6
Sequence: GTTTGGTCTTACCAATT
Locus tag: Shew_1275
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shew_1276
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
Shew_1275
aceB
Malate synthase (EC 2.3.3.9)
Shew_1276
aceA
Isocitrate lyase (EC 4.1.3.1)
Position: -39
Score: 6.4
Sequence: AATTGGTAAGACCAATT
Locus tag: Shew_3432
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: Shew_3431
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Shew_3430
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: Shew_3429
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Shew_3432
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Shew_3431
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Shew_3430
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Shew_3429
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -202
Score: 6
Sequence: ATTTGGTAAGACCAATT
Locus tag: Shew_1219
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Shew_1220
Name: oadA
Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Locus tag: Shew_1221
Name: oadB
Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Shew_1219
oadG
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Shew_1220
oadA
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Shew_1221
oadB
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Position: -242
Score: 6.4
Sequence: AATTGGTCTTACCAATT
Locus tag: Shew_2390
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Shew_2391
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Shew_2390
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
Shew_2391
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -205
Score: 6.4
Sequence: AATTGGTCAGACCAATT
Locus tag: Shew_2389
Name: pflX
Funciton: pyruvate formate lyase-related hypothetical transporter
Shew_2389
pflX
pyruvate formate lyase-related hypothetical transporter
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