Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PdhR in Shewanella piezotolerans WP3

Properties
Regulator type: Transcription factor
TF locus tag: swp_4753
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Regulog: PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -141
Score: 5.9
Sequence: AAATGGTAATACCAATT
Locus tag: swp_4551
Name: deaD
Funciton: Cold-shock DEAD-box protein A
deaD
Cold-shock DEAD-box protein A

Position: -158
Score: 4.2
Sequence: CATTGGTCTGACCCCAT
Position: -39
Score: 6.4
Sequence: AATTGGTAAGACCAATT
Locus tag: swp_4753
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: swp_4752
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: swp_4751
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)

Position: -258
Score: 6.1
Sequence: TATTGGTATGACCAATT
Locus tag: swp_1378
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: swp_1379
Name: oadA
Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Locus tag: swp_1380
Name: oadB
Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
oadG
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
oadA
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
oadB
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)

Position: -222
Score: 6.4
Sequence: AATTGGTCTTACCAATT
Locus tag: swp_1952
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: swp_1951
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -215
Score: 6.4
Sequence: AATTGGTCTTACCAATT
Locus tag: swp_1953
Name: pflX
Funciton: pyruvate formate lyase-related hypothetical transporter
pflX
pyruvate formate lyase-related hypothetical transporter
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