Regulon of PdhR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shal_0475
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -142 Score: 6 Sequence: GATTGGTATTACCAATT Locus tag: Shal_0628 Name: deaD Funciton: Cold-shock DEAD-box protein A
	Shal_0628	deaD	Cold-shock DEAD-box protein A
Position: -157 Score: 4.4 Sequence: CATTGGTCTGACCCCTA Position: -39 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: Shal_0475 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: Shal_0476 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: Shal_0477 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: Shal_0478 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	Shal_0475	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	Shal_0476	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	Shal_0477	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	Shal_0478	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -196 Score: 4.7 Sequence: TTATGGTACGACCAATT Locus tag: Shal_1235 Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Locus tag: Shal_1236 Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Locus tag: Shal_1237 Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
	Shal_1235	oadG	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
	Shal_1236	oadA	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
	Shal_1237	oadB	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Position: -238 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Shal_2592 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Shal_2593 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Shal_2592	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Shal_2593	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -216 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Shal_2591 Name: pflX Funciton: pyruvate formate lyase-related hypothetical transporter
	Shal_2591	pflX	pyruvate formate lyase-related hypothetical transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD