Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing aceB gene

Properties
Regulog: PdhR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Phylum: Proteobacteria/gamma
Built upon 109 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -298
Score: 5.08471
Sequence: TGTTGGTAAGACAAATT
Position: -205
Score: 5.67145
Sequence: GTTTGGTCTGACCAATT
Locus tag: Sama_2381
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sama_2380
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -298 5.1 TGTTGGTAAGACAAATT Sama_2381
-205 5.7 GTTTGGTCTGACCAATT
Shewanella baltica OS155
Position: -221
Score: 5.74757
Sequence: GCTTGGTCAGACCAATT
Locus tag: Sbal_1316
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sbal_1317
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -221 5.7 GCTTGGTCAGACCAATT Sbal_1316
Shewanella denitrificans OS217
Position: -258
Score: 5.46079
Sequence: CCTTGGTCATACCAATT
Position: -166
Score: 5.69424
Sequence: GCTTGGTCTTACCAATT
Locus tag: Sden_1245
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sden_1246
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -258 5.5 CCTTGGTCATACCAATT Sden_1245
-166 5.7 GCTTGGTCTTACCAATT
Shewanella frigidimarina NCIMB 400
Position: -299
Score: 5.24752
Sequence: TGTTGGTAAGACCATTT
Locus tag: Sfri_1101
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sfri_1102
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -299 5.2 TGTTGGTAAGACCATTT Sfri_1101
Shewanella loihica PV-4
Position: -233
Score: 5.61811
Sequence: GTTTGGTCTTACCAATT
Locus tag: Shew_1275
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shew_1276
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -233 5.6 GTTTGGTCTTACCAATT Shew_1275
Shewanella oneidensis MR-1
Position: -306
Score: 4.62577
Sequence: AAGTTGTCTGACAAATT
Position: -214
Score: 5.74234
Sequence: TGTTGGTCAGACCAATT
Locus tag: SO_1483
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: SO_1484
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -306 4.6 AAGTTGTCTGACAAATT SO_1483
-214 5.7 TGTTGGTCAGACCAATT
Shewanella pealeana ATCC 700345
Position: -349
Score: 4.57243
Sequence: AATTTGTCTTACAAGTT
Locus tag: Spea_1290
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -349 4.6 AATTTGTCTTACAAGTT Spea_1290
Shewanella putrefaciens CN-32
Position: -145
Score: 5.67145
Sequence: GTTTGGTCTGACCAATT
Locus tag: Sputcn32_1238
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sputcn32_1239
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -145 5.7 GTTTGGTCTGACCAATT Sputcn32_1238
Shewanella sediminis HAW-EB3
Position: -305
Score: 4.65318
Sequence: CATTTGTCTGACAAATT
Position: -215
Score: 5.60039
Sequence: GATTGGTCATACCATTT
Locus tag: Ssed_1414
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Ssed_1415
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -305 4.7 CATTTGTCTGACAAATT Ssed_1414
-215 5.6 GATTGGTCATACCATTT
Shewanella sp ANA-3
Position: -306
Score: 4.62577
Sequence: AAGTTGTCTGACAAATT
Position: -214
Score: 5.81846
Sequence: TCTTGGTCAGACCAATT
Locus tag: Shewana3_2943
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewana3_2942
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -306 4.6 AAGTTGTCTGACAAATT Shewana3_2943
-214 5.8 TCTTGGTCAGACCAATT
Shewanella sp MR-4
Position: -306
Score: 4.62577
Sequence: AAGTTGTCTGACAAATT
Position: -214
Score: 5.81846
Sequence: TCTTGGTCAGACCAATT
Locus tag: Shewmr4_2767
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewmr4_2766
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -306 4.6 AAGTTGTCTGACAAATT Shewmr4_2767
-214 5.8 TCTTGGTCAGACCAATT
Shewanella sp MR-7
Position: -306
Score: 4.62577
Sequence: AAGTTGTCTGACAAATT
Position: -214
Score: 5.81846
Sequence: TCTTGGTCAGACCAATT
Locus tag: Shewmr7_2845
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewmr7_2844
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -306 4.6 AAGTTGTCTGACAAATT Shewmr7_2845
-214 5.8 TCTTGGTCAGACCAATT
Shewanella sp W3-18-1
Position: -144
Score: 5.67145
Sequence: GTTTGGTCTGACCAATT
Locus tag: Sputw3181_2866
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sputw3181_2865
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -144 5.7 GTTTGGTCTGACCAATT Sputw3181_2866
Shewanella woodyi ATCC 51908
Position: -335
Score: 5.22458
Sequence: AATTTGTCTGACAAATT
Locus tag: Swoo_1528
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -335 5.2 AATTTGTCTGACAAATT Swoo_1528
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