Regulon of PdhR in Shewanella putrefaciens CN-32
| Regulator type: | Transcription factor |
| TF locus tag: | Sputcn32_3418 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Regulog: | PdhR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 5 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - PdhR
- By TF family - GntR/Others
- By effector - Pyruvate
- By pathway - Pyruvate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -202
Score: 6.4 Sequence: AATTGGTCAGACCAATT
Locus tag: Sputcn32_2377
Name: pflX Funciton: pyruvate formate lyase-related hypothetical transporter |
|||
|
pflX
|
pyruvate formate lyase-related hypothetical transporter
|
||
|
Position: -194
Score: 4.4 Sequence: AAATGGTCTGACCCCAT
Position: -38
Score: 6.4 Sequence: AATTGGTAAGACCAATT
Locus tag: Sputcn32_3418
Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: Sputcn32_3417
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Sputcn32_3416
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: Sputcn32_3415
Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) |
|||
|
pdhR
|
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
|
||
|
aceE
|
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
|
||
|
aceF
|
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
|
||
|
lpdA
|
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
|
||
|
Position: -246
Score: 5.6 Sequence: ACATGGTAAGACCAATT
Locus tag: Sputcn32_1029
Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sputcn32_1030
Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
Locus tag: Sputcn32_1031
Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) |
|||
|
oadG
|
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
|
||
|
oadA
|
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
|
||
|
oadB
|
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
|
||
|
Position: -256
Score: 6.4 Sequence: AATTGGTCTTACCAATT
Locus tag: Sputcn32_2378
Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Sputcn32_2379
Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|||
|
pflB
|
Pyruvate formate-lyase (EC 2.3.1.54)
|
||
|
pflA
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
|
||
|
Position: -145
Score: 5.7 Sequence: GTTTGGTCTGACCAATT
Locus tag: Sputcn32_1238
Name: aceB Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sputcn32_1239
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) |
|||
|
aceB
|
Malate synthase (EC 2.3.3.9)
|
||
|
aceA
|
Isocitrate lyase (EC 4.1.3.1)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |