Regulon of PdhR in Shewanella sp MR-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewmr4_0427
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -306 Score: 4.6 Sequence: AAGTTGTCTGACAAATT Position: -214 Score: 5.8 Sequence: TCTTGGTCAGACCAATT Locus tag: Shewmr4_2767 Name: aceB Funciton: Malate synthase (EC 2.3.3.9) Locus tag: Shewmr4_2766 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Shewmr4_2767	aceB	Malate synthase (EC 2.3.3.9)
	Shewmr4_2766	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -175 Score: 4.4 Sequence: AAATGGTCTGACCCCAT Position: -38 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: Shewmr4_0427 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: Shewmr4_0428 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: Shewmr4_0429 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: Shewmr4_0430 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	Shewmr4_0427	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	Shewmr4_0428	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	Shewmr4_0429	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	Shewmr4_0430	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -79 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Shewmr4_2987 Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Locus tag: Shewmr4_2986 Name: oadA Funciton: Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Locus tag: Shewmr4_2985 Name: oadB Funciton: Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
	Shewmr4_2987	oadG	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
	Shewmr4_2986	oadA	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)
	Shewmr4_2985	oadB	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)
Position: -246 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: Shewmr4_1494 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: Shewmr4_1493 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	Shewmr4_1494	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	Shewmr4_1493	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -254 Score: 6.4 Sequence: AATTGGTATGACCAATT Locus tag: Shewmr4_1495 Name: focA Funciton: formate transporter
	Shewmr4_1495	focA	formate transporter

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