Regulon of PdhR in Shewanella oneidensis MR-1

Properties
Regulator type:	Transcription factor
TF locus tag:	SO0423
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Pyruvate metabolism
Effector:	Pyruvate
Regulog:	PdhR - Shewanellaceae
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 109 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PdhR
By TF family - GntR/Others
By effector - Pyruvate
By pathway - Pyruvate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -306 Score: 4.6 Sequence: AAGTTGTCTGACAAATT Position: -214 Score: 5.7 Sequence: TGTTGGTCAGACCAATT Locus tag: SO_1483 Name: aceB Funciton: Malate synthase (EC 2.3.3.9) Locus tag: SO_1484 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	SO_1483	aceB	Malate synthase (EC 2.3.3.9)
	SO_1484	aceA	Isocitrate lyase (EC 4.1.3.1)
Position: -175 Score: 4.5 Sequence: TAATGGTCTGACCCCTT Position: -38 Score: 6.4 Sequence: AATTGGTAAGACCAATT Locus tag: SO_0423 Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family Locus tag: SO_0424 Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Locus tag: SO_0425 Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Locus tag: SO_0426 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	SO_0423	pdhR	Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
	SO_0424	aceE	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
	SO_0425	aceF	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
	SO_0426	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -247 Score: 6.4 Sequence: AATTGGTCTTACCAATT Locus tag: SO_2912 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: SO_2913 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	SO_2912	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	SO_2913	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -280 Score: 6.4 Sequence: AATTGGTATGACCAATT Locus tag: SO_2911 Name: focA Funciton: formate transporter
	SO_2911	focA	formate transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD