Regulons of Reinekea sp. MED297

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	3	2
TF	FabR2	Unsaturated acyl-CoA; Unsaturated acyl-ACP	Fatty acid biosynthesis	3	2
TF	FruR	Fructose-1-phosphate; Fructose-1,6-diphosphate	Fructose utilization	3	4
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	23	17
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	4
TF	LexA	DNA damage	SOS response	10	9
TF	LiuR		Branched-chain amino acid degradation	6	6
TF	MetR	Homocysteine	Methionine biosynthesis	2	4
TF	NagC	N-acetylglucosamine-6-phosphate	N-acetylglucosamine utilization	5	5
TF	NagQ	N-acetylglucosamine	N-acetylglucosamine utilization	5	5
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	NsrR	Nitric oxide	Nitrosative stress response	2	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	5
TF	PrpR	2-methylcitrate	Methylcitrate utilization	3	4
TF	PsrA	Oleate	Fatty acid degradation	12	11
TF	RutR	Uracil	Pyrimidine utilization	5	3
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	2
TF	SoxR	Paraquat	Superoxide stress response	1	1
TF	TrpR	Tryptophan	Tryptophan biosynthesis	1	1
TF	YjiR		Metabolite transport	1	1
TF	ZntR	Zinc ion, (Zn2+)	Zinc resistance	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	4
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	2	1
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --