Regulon of BirA in Reinekea sp. MED297
| Regulator type: | Transcription factor |
| TF locus tag: | MED297_06733 |
| Regulator family: | BirA |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Regulog: | BirA - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - BirA
- By TF family - BirA
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -83
Score: 6.8 Sequence: ATGTAAAGT-(15)-AATTGACAA
Locus tag: MED297_08751
Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: MED297_08756
Name: null Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: MED297_08761
Name: bioH Funciton: Biotin synthesis protein BioH
Locus tag: MED297_08766
Name: bioC Funciton: Biotin synthesis protein BioC
Locus tag: MED297_08771
Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3) |
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bioB
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Biotin synthase (EC 2.8.1.6)
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8-amino-7-oxononanoate synthase (EC 2.3.1.47)
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bioH
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Biotin synthesis protein BioH
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bioC
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Biotin synthesis protein BioC
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bioD
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Dethiobiotin synthetase (EC 6.3.3.3)
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Position: -231
Score: 6.8 Sequence: TTGTCAATT-(15)-ACTTTACAT
Locus tag: MED297_08746
Name: COG1040 Funciton: Competence protein F homolog, phosphoribosyltransferase domain |
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COG1040
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Competence protein F homolog, phosphoribosyltransferase domain
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |