Regulon of NagC in Reinekea sp. MED297

Properties
Regulator type:	Transcription factor
TF locus tag:	MED297_06339
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine-6-phosphate
Regulog:	NagC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	7
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NagC
By TF family - ROK
By effector - N-acetylglucosamine-6-phosphate
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -154 Score: 5.8 Sequence: ATTTAATTCATTCTGAAAATTAT Locus tag: MED297_06344 Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) Locus tag: MED297_06349 Name: nagF Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
	MED297_06344	nagE	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
	MED297_06349	nagF	PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Position: -100 Score: 6 Sequence: ATCTGATTTAAGTCAAAAAAAAT Locus tag: MED297_19597 Name: nagF Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Locus tag: MED297_19592 Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
	MED297_19597	nagF	PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
	MED297_19592	nagE	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Position: -121 Score: 5.8 Sequence: ATAATTTTCAGAATGAATTAAAT Locus tag: MED297_06339 Name: nagC Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
	MED297_06339	nagC	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Position: -149 Score: 5.4 Sequence: ATTATTTTTGACTTAAATCAATT Locus tag: MED297_10246 Name: mcp2 Funciton: Hypothetical methyl-accepting chemotaxis protein
	MED297_10246	mcp2	Hypothetical methyl-accepting chemotaxis protein
Position: -50 Score: 5.6 Sequence: ATTTGATTCATAAAAAATAAAAT Locus tag: MED297_09986 Name: mcp Funciton: Methyl-accepting chemotaxis protein
	MED297_09986	mcp	Methyl-accepting chemotaxis protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD