Regulon of NagQ in Reinekea sp. MED297
| Regulator type: | Transcription factor |
| TF locus tag: | MED297_03120 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Regulog: | NagQ - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - NagQ
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -78
Score: 4.9 Sequence: TGGTTTTGTGGTGGTATC
Locus tag: MED297_20052
Name: null Funciton: Predicted N-acetylglucosamine transporter |
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Predicted N-acetylglucosamine transporter
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Position: -51
Score: 5.8 Sequence: AGGTATTTAATTGGTATT
Locus tag: MED297_11870
Name: cdxA Funciton: Chitodextrinase precursor (EC 3.2.1.14) |
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cdxA
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Chitodextrinase precursor (EC 3.2.1.14)
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Position: -44
Score: 5.9 Sequence: AGGTATTATATTGGTATT
Locus tag: MED297_05914
Name: MED297_05914 Funciton: Hypothetical protein |
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MED297_05914
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Hypothetical protein
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Position: -73
Score: 6.1 Sequence: TGGTATTAAATTGGTATT
Locus tag: MED297_03115
Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Locus tag: MED297_03120
Name: nagQ Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Locus tag: MED297_03125
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: MED297_03130
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: MED297_03135
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nagK
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N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
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nagQ
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Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Position: -144
Score: -2.1 Sequence: AATGCCAAAGAGATACCA
Locus tag: MED297_00800
Name: chiA Funciton: Chitinase (EC 3.2.1.14) |
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chiA
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Chitinase (EC 3.2.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |