Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Reinekea sp. MED297

Properties
Regulator type: Transcription factor
TF locus tag: MED297_14205
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 15
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -138
Score: 4.8
Sequence: TGGTAATAAAAATACAA
Locus tag: MED297_17772
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
MED297_17772
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -36
Score: 5.2
Sequence: TTGTAATTTTCCTACAT
Locus tag: MED297_12602
Name: gpmM
Funciton: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
MED297_12602
gpmM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Position: -419
Score: 4.5
Sequence: TTGTAGGAAATTCACAA
Position: -223
Score: 4.1
Sequence: TTGTAGTAAAGTTACTC
Locus tag: MED297_14210
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
MED297_14210
glk
Glucokinase (EC 2.7.1.2)
Position: -54
Score: 4.5
Sequence: TTGTGAATTTCCTACAA
Locus tag: MED297_14205
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Locus tag: MED297_14200
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
MED297_14205
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
MED297_14200
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -167
Score: 5.1
Sequence: TTGAAATTTTACTACAA
Locus tag: MED297_12237
Name: oxlT
Funciton: Putative oxalate:formate antiporter
MED297_12237
oxlT
Putative oxalate:formate antiporter
Position: -95
Score: 5.4
Sequence: TTGTAATAAAATTACAT
Locus tag: MED297_10216
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
MED297_10216
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
Position: -122
Score: 5.5
Sequence: CTGTAATAAAACTACAA
Locus tag: MED297_14225
Name: ugpC
Funciton: SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
MED297_14225
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
Position: -478
Score: 4.9
Sequence: TCGTAATATCACTACAA
Position: -223
Score: 4.2
Sequence: CTGTAGTTTAGTTTCAG
Locus tag: MED297_10936
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
MED297_10936
pckA
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -143
Score: 5
Sequence: TTGTAATTTTGTTACAT
Locus tag: MED297_03767
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
MED297_03767
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -136
Score: 4.4
Sequence: TTGTAGTTTACTTTCAT
Position: -60
Score: 4.7
Sequence: TTGTAATTTTACTACGT
Locus tag: MED297_14320
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
MED297_14320
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Position: -222
Score: 4.3
Sequence: TCGTAATATTCCTACGA
Locus tag: MED297_15774
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
MED297_15774
gltA
Citrate synthase (si) (EC 2.3.3.1)
Position: -196
Score: 4.9
Sequence: TTGTAGTTTTCTTACAC
Locus tag: MED297_08611
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
MED297_08611
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -346
Score: 4.9
Sequence: ATGTAATTAAATTACAT
Locus tag: MED297_17617
Name: pykF
Funciton: Pyruvate kinase (EC 2.7.1.40)
MED297_17617
pykF
Pyruvate kinase (EC 2.7.1.40)
Position: -101
Score: 5.2
Sequence: TTGTAAGAAAACTACAT
Locus tag: MED297_13507
Name: eno
Funciton: Enolase (EC 4.2.1.11)
MED297_13507
eno
Enolase (EC 4.2.1.11)
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