Regulon of NrdR in Reinekea sp. MED297
| Regulator type: | Transcription factor |
| TF locus tag: | MED297_09496 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -397
Score: 4.8 Sequence: ACACAATATATGGTTT
Position: -366
Score: 4.9 Sequence: GCCCTATATGTTGTGT
Locus tag: MED297_18987
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MED297_18982
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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Position: -165
Score: 4.8 Sequence: CCACTACAGGTTGTGT
Position: -133
Score: 4.5 Sequence: ACACTACAGGTAGTGC
Locus tag: MED297_14097
Name: nrdJa Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Locus tag: MED297_14092
Name: nrdJa Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1) |
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nrdJa
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Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
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nrdJa
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Ribonucleotide reductase of class II (coenzyme B12-dependent), alpha subunit (EC 1.17.4.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |