Regulon of LiuR in Reinekea sp. MED297

Properties
Regulator type:	Transcription factor
TF locus tag:	MED297_07471
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Oceanospirillales/Alteromonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -85 Score: 6.2 Sequence: GTTGACGTTAACGTAAAC Position: -79 Score: 5.2 Sequence: GTTAACGTAAACGAAAAC Locus tag: MED297_07476 Name: mmgB Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	MED297_07476	mmgB	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -66 Score: 5.7 Sequence: GTTGACGTTTACGTCAAC Position: -60 Score: 4.9 Sequence: GTTTACGTCAACGTCACT Locus tag: MED297_19182 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: MED297_19177 Name: mmgC Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: MED297_19172 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: MED297_19167 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: MED297_19157 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	MED297_19182	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	MED297_19177	mmgC	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	MED297_19172	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	MED297_19167	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	MED297_19157	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Position: -105 Score: 5.2 Sequence: GTTTTCGTTTACGTTAAC Position: -99 Score: 6.2 Sequence: GTTTACGTTAACGTCAAC Locus tag: MED297_07471 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	MED297_07471	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD