Regulog LiuR - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Oceanospirillales/Alteromonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Statistics of regulated genes
Genome	Genes	Operons
Hahella chejuensis KCTC 2396	4	2
Marinobacter aqueolei	9	4
Marinobacter sp. ELB17	15	4
Oceanobacter sp. RED65
Oceanospirillum sp. MED92	10	3
Marinomonas sp. MWYL1
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043
Reinekea sp. MED297	7	3
Alcanivorax borkumensis SK2	7	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
fabG	Hahella chejuensis KCTC 2396 Gene: HCH_05141: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Marinobacter aqueolei Gene: Maqu_2017: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Marinobacter sp. ELB17 Gene: MELB17_18234: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	* Alcanivorax borkumensis SK2 Site: position = -16 score = 5.09858 sequence = GTTTACCCTAAGGTAAAT Gene: ABO_1713: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

CRON 2.
paaG	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	* Marinobacter sp. ELB17 Site: position = -121 score = 5.45831 sequence = GTTTACGTAAACGTTAGG Gene: MELB17_05192: Enoyl-CoA hydratase/isomerase	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Enoyl-CoA hydratase/isomerase

CRON 3.
ldh	Hahella chejuensis KCTC 2396	* Marinobacter aqueolei Site: position = -172 score = 5.84617 sequence = GTTGACGTTCACGTAAAC Gene: Maqu_2878: Leucine dehydrogenase (EC 1.4.1.9)	Marinobacter sp. ELB17 Gene: MELB17_05137: Leucine dehydrogenase (EC 1.4.1.9)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92 Gene: MED92_01474: Leucine dehydrogenase (EC 1.4.1.9)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_20272: Leucine dehydrogenase (EC 1.4.1.9)	Alcanivorax borkumensis SK2	Leucine dehydrogenase (EC 1.4.1.9)

CRON 4.
mmgB	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	* Reinekea sp. MED297 Site: position = -79 score = 5.16834 sequence = GTTAACGTAAACGAAAAC Site: position = -85 score = 6.18168 sequence = GTTGACGTTAACGTAAAC Gene: MED297_07476: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Alcanivorax borkumensis SK2	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)

CRON 5.
bkdA1	* Hahella chejuensis KCTC 2396 Site: position = -123 score = 4.85852 sequence = GTTTACGTCAACGTCACT Site: position = -129 score = 5.34112 sequence = GCTGACGTTTACGTCAAC Gene: HCH_03687: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	* Marinobacter aqueolei Site: position = -130 score = 6.18029 sequence = GTTTACGTTAAGGTAAAG Gene: Maqu_1382: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	* Marinobacter sp. ELB17 Site: position = -145 score = 5.87027 sequence = CTTTACGTTAAGGTCAAC Gene: MELB17_06329: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19147: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Alcanivorax borkumensis SK2	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
bkdA2	Hahella chejuensis KCTC 2396 Gene: HCH_03686: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Marinobacter aqueolei Gene: Maqu_1381: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Marinobacter sp. ELB17 Gene: MELB17_06324: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19142: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Alcanivorax borkumensis SK2	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
bkdB	Hahella chejuensis KCTC 2396 Gene: HCH_03685: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)	Marinobacter aqueolei Gene: Maqu_1380: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)	Marinobacter sp. ELB17 Gene: MELB17_06319: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19137: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)	Alcanivorax borkumensis SK2	Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)

CRON 6.
ivdG	Hahella chejuensis KCTC 2396	* Marinobacter aqueolei Site: position = -83 score = 6.33972 sequence = GTTTACGTAAACGTAAAG Site: position = -89 score = 5.16834 sequence = GTTAAAGTTTACGTAAAC Gene: Maqu_2119: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)	* Marinobacter sp. ELB17 Site: position = -58 score = 6.33972 sequence = GTTTACGTAAACGTAAAG Site: position = -64 score = 5.16834 sequence = GTTAAAGTTTACGTAAAC Gene: MELB17_07894: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_15460: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)	Alcanivorax borkumensis SK2	3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
acdH	Hahella chejuensis KCTC 2396	Marinobacter aqueolei Gene: Maqu_2118: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Marinobacter sp. ELB17 Gene: MELB17_07899: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ivdA	Hahella chejuensis KCTC 2396	Marinobacter aqueolei Gene: Maqu_2117: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	Marinobacter sp. ELB17 Gene: MELB17_07904: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	Oceanobacter sp. RED65	* Oceanospirillum sp. MED92 Site: position = -46 score = 5.69938 sequence = GTTGACGTTTACGTCAAC Gene: MED92_06108: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_15465: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)	Alcanivorax borkumensis SK2	3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)

CRON 7.
liuR	* Hahella chejuensis KCTC 2396 Site: position = -58 score = 6.00939 sequence = GTTGACGTAAACGTAAAC Site: position = -64 score = 4.85339 sequence = TATAACGTTGACGTAAAC Gene: HCH_03942: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	* Marinobacter aqueolei Site: position = -46 score = 5.16834 sequence = GTTTACGTAAACTTTAAC Site: position = -52 score = 6.33972 sequence = CTTTACGTTTACGTAAAC Gene: Maqu_2120: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	* Marinobacter sp. ELB17 Site: position = -45 score = 5.16834 sequence = GTTTACGTAAACTTTAAC Site: position = -51 score = 6.33972 sequence = CTTTACGTTTACGTAAAC Gene: MELB17_07889: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	Oceanobacter sp. RED65 Gene: RED65_07414: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	* Oceanospirillum sp. MED92 Site: position = -65 score = 4.63226 sequence = ATTGATCTTTACGTAAAC Site: position = -59 score = 6.0297 sequence = CTTTACGTAAACGTCAAC Gene: MED92_06078: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	* Reinekea sp. MED297 Site: position = -99 score = 6.18168 sequence = GTTTACGTTAACGTCAAC Site: position = -105 score = 5.16834 sequence = GTTTTCGTTTACGTTAAC Gene: MED297_07471: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	* Alcanivorax borkumensis SK2 Site: position = -36 score = 6.51201 sequence = CTTTACGTTAACGTAAAC Gene: ABO_1241: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuA	Hahella chejuensis KCTC 2396 Gene: HCH_03943: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Marinobacter aqueolei Gene: Maqu_2121: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Marinobacter sp. ELB17 Gene: MELB17_07884: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Oceanobacter sp. RED65 Gene: RED65_07419: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Oceanospirillum sp. MED92 Gene: MED92_06073: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	* Reinekea sp. MED297 Site: position = -60 score = 4.85852 sequence = GTTTACGTCAACGTCACT Site: position = -66 score = 5.69938 sequence = GTTGACGTTTACGTCAAC Gene: MED297_19182: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Alcanivorax borkumensis SK2 Gene: ABO_1240: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuB	Hahella chejuensis KCTC 2396 Gene: HCH_03944: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Marinobacter aqueolei Gene: Maqu_2123: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Marinobacter sp. ELB17 Gene: MELB17_07879: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Oceanobacter sp. RED65 Gene: RED65_07424: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Oceanospirillum sp. MED92 Gene: MED92_06068: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19172: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Alcanivorax borkumensis SK2 Gene: ABO_1239: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
liuC	Hahella chejuensis KCTC 2396 Gene: HCH_03945: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Marinobacter aqueolei Gene: Maqu_2124: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Marinobacter sp. ELB17 Gene: MELB17_07874: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Oceanobacter sp. RED65 Gene: RED65_07429: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Oceanospirillum sp. MED92 Gene: MED92_06063: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19167: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Alcanivorax borkumensis SK2 Gene: ABO_1238: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
liuD	Hahella chejuensis KCTC 2396 Gene: HCH_03946: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Marinobacter aqueolei Gene: Maqu_2125: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Marinobacter sp. ELB17 Gene: MELB17_07869: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Oceanobacter sp. RED65 Gene: RED65_07434: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Oceanospirillum sp. MED92 Gene: MED92_06058: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19157: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Alcanivorax borkumensis SK2 Gene: ABO_1237: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuE	Hahella chejuensis KCTC 2396 Gene: HCH_03947: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Marinobacter aqueolei Gene: Maqu_2126: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Marinobacter sp. ELB17 Gene: MELB17_07864: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Oceanobacter sp. RED65 Gene: RED65_07439: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Oceanospirillum sp. MED92 Gene: MED92_06053: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107 Gene: CJA_2967: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
ahpD	Hahella chejuensis KCTC 2396	Marinobacter aqueolei Gene: Maqu_3407: alkylhydroperoxidase AhpD family core domain protein	Marinobacter sp. ELB17 Gene: MELB17_07859: alkylhydroperoxidase AhpD family core domain protein	Oceanobacter sp. RED65	2 Oceanospirillum sp. MED92 Gene: MED92_06048: alkylhydroperoxidase AhpD family core domain protein Gene: MED92_06193: alkylhydroperoxidase AhpD family core domain protein	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	alkylhydroperoxidase AhpD family core domain protein
acs	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17 Gene: MELB17_07854: acyl-CoA synthase	Oceanobacter sp. RED65	Oceanospirillum sp. MED92 Gene: MED92_06043: acyl-CoA synthase	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	acyl-CoA synthase
aacS	Hahella chejuensis KCTC 2396 Gene: HCH_03948: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_11625: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	* Oceanospirillum sp. MED92 Site: position = -108 score = 5.69149 sequence = GTTTCCGTTTACGTAAAC Gene: MED92_12069: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40 Gene: Sde_0006: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Teredinibacter turnerae T7901 Gene: TERTU_0022: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_1820: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Reinekea sp. MED297	Alcanivorax borkumensis SK2 Gene: ABO_1236: Acetoacetyl-CoA synthetase (EC 6.2.1.16)	Acetoacetyl-CoA synthetase (EC 6.2.1.16)
mmgC	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_19177: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	Alcanivorax borkumensis SK2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog LiuR - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --