Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Marinobacter aqueolei

Properties
Regulator type: Transcription factor
TF locus tag: Maqu_2120
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 28 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -172
Score: 5.8
Sequence: GTTGACGTTCACGTAAAC
Locus tag: Maqu_2878
Name: ldh
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
ldh
Leucine dehydrogenase (EC 1.4.1.9)

Position: -130
Score: 6.2
Sequence: GTTTACGTTAAGGTAAAG
Locus tag: Maqu_1382
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Maqu_1381
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Maqu_1380
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
bkdA2
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
bkdB
Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)

Position: -89
Score: 5.2
Sequence: GTTAAAGTTTACGTAAAC
Position: -83
Score: 6.3
Sequence: GTTTACGTAAACGTAAAG
Locus tag: Maqu_2119
Name: ivdG
Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
Locus tag: Maqu_2118
Name: acdH
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Maqu_2117
Name: ivdA
Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
ivdG
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
acdH
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ivdA
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)

Position: -52
Score: 6.3
Sequence: CTTTACGTTTACGTAAAC
Position: -46
Score: 5.2
Sequence: GTTTACGTAAACTTTAAC
Locus tag: Maqu_2120
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Maqu_2121
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuA
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD