Regulon of LiuR in Marinobacter aqueolei
| Regulator type: | Transcription factor |
| TF locus tag: | Maqu_2120 |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -172
Score: 5.8 Sequence: GTTGACGTTCACGTAAAC
Locus tag: Maqu_2878
Name: ldh Funciton: Leucine dehydrogenase (EC 1.4.1.9) |
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ldh
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Leucine dehydrogenase (EC 1.4.1.9)
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Position: -130
Score: 6.2 Sequence: GTTTACGTTAAGGTAAAG
Locus tag: Maqu_1382
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Maqu_1381
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Maqu_1380
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1
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Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
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bkdA2
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Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
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bkdB
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Dihydrolipoamide acyltransferase component of branched-chain alpa-keto acid dehydrogenase complex (EC 2.3.1.168)
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Position: -89
Score: 5.2 Sequence: GTTAAAGTTTACGTAAAC
Position: -83
Score: 6.3 Sequence: GTTTACGTAAACGTAAAG
Locus tag: Maqu_2119
Name: ivdG Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
Locus tag: Maqu_2118
Name: acdH Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Maqu_2117
Name: ivdA Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) |
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ivdG
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3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
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acdH
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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ivdA
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3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
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Position: -52
Score: 6.3 Sequence: CTTTACGTTTACGTAAAC
Position: -46
Score: 5.2 Sequence: GTTTACGTAAACTTTAAC
Locus tag: Maqu_2120
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Maqu_2121
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
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liuR
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Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
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liuA
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Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |