Collection of regulogs involved in Branched-chain amino acid degradation
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Firmicutes | BkdR - Bacillales | 10 (11) | 26 |
TF | Proteobacteria/alpha | LiuR - Caulobacterales | 4 (4) | 14 |
TF | Proteobacteria/alpha | LiuR - Rhizobiales | 9 (15) | 84 |
TF | Proteobacteria/alpha | LiuR - Rhodobacterales | 13 (15) | 19 |
TF | Proteobacteria/alpha | LiuR - Rhodospirillales | 3 (9) | 17 |
TF | Proteobacteria/alpha | LiuR - Sphingomonadales | 6 (7) | 65 |
TF | Proteobacteria/beta | LiuQ - Burkholderia | 8 (8) | 32 |
TF | Proteobacteria/beta | LiuQ - Comamonadaceae | 2 (11) | 8 |
TF | Proteobacteria/beta | LiuQ - Ralstonia | 4 (6) | 14 |
TF | Proteobacteria/beta | LiuR - Burkholderia | 2 (8) | 6 |
TF | Proteobacteria/beta | LiuR - Comamonadaceae | 9 (11) | 59 |
TF | Proteobacteria/beta | LiuR - Ralstonia | 6 (6) | 57 |
TF | Proteobacteria/beta | LiuR - Various betaproteobacteria | 5 (12) | 31 |
TF | Proteobacteria/gamma | LiuR - Alteromonadales | 8 (9) | 65 |
TF | Proteobacteria/gamma | LiuR - Oceanospirillales/Alteromonadales | 6 (12) | 28 |
TF | Proteobacteria/gamma | LiuR - Pseudomonadaceae | 8 (8) | 32 |
TF | Proteobacteria/gamma | LiuR - Psychromonadaceae/Aeromonadales | 2 (6) | 20 |
TF | Proteobacteria/gamma | LiuR - Shewanellaceae | 16 (16) | 134 |
TF | Proteobacteria/gamma | LiuR - Vibrionales | 6 (10) | 38 |