Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog LiuR - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodospirillum rubrum ATCC 11170 20 4
Magnetospirillum magnetotacticum MS-1
Magnetospirillum magneticum AMB-1
Azospirillum sp. B510 10 3
Rhodospirillum centenum SW 9 3
Gluconacetobacter diazotrophicus PAl 5
Acetobacter pasteurianus IFO 3283-01
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
liuA
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -194
score = 5.79697
sequence = TTTGACGTTTACGTAAAC

Site:
position = -188
score = 4.95051
sequence = GTTTACGTAAACGGAAGA

Gene: Rru_A1948: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03011130: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Magnetospirillum magneticum AMB-1

Gene: amb0677: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Azospirillum sp. B510

Gene: AZL_a02230: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Rhodospirillum centenum SW

Gene: RC1_0401: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Rru_A1947
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1947: nucleotidyltransferase-like
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_027350: nucleotidyltransferase-like
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_0297: nucleotidyltransferase-like
nucleotidyltransferase-like
ivdA
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1946: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Acetyl-CoA C-acyltransferase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
csgA
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1945: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007773: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
 
Magnetospirillum magneticum AMB-1

Gene: amb3831: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW

Gene: RC1_0395: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 )
Rru_A1944
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1944: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007772: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
 
Magnetospirillum magneticum AMB-1

Gene: amb3830: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
 
Azospirillum sp. B510

Gene: AZL_004590: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
 
Rhodospirillum centenum SW

Gene: RC1_0394: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-)
liuD
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1943: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03011129: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Magnetospirillum magneticum AMB-1

Gene: amb0676: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Azospirillum sp. B510

Gene: AZL_a02260: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Rhodospirillum centenum SW

Gene: RC1_0390: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
liuC
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1942: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03011128: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Magnetospirillum magneticum AMB-1

Gene: amb0675: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Azospirillum sp. B510

Gene: AZL_a02270: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Rhodospirillum centenum SW

Gene: RC1_0385: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
liuB
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1941: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03011127: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
 
Magnetospirillum magneticum AMB-1

Gene: amb0674: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
 
Azospirillum sp. B510

Gene: AZL_a02280: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
 
Rhodospirillum centenum SW

Gene: RC1_0381: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuE
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1940: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03011126: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Magnetospirillum magneticum AMB-1

Gene: amb0673: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Azospirillum sp. B510

Gene: AZL_a02290: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Rhodospirillum centenum SW

Gene: RC1_0377: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
CRON 2.
ivdC
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -132
score = 5.79697
sequence = TTTGACGTTTACGTAAAC

Site:
position = -126
score = 4.71438
sequence = GTTTACGTAAACGGAAGT

Gene: Rru_A1835: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010730: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
 
Magnetospirillum magneticum AMB-1

Gene: amb3586: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
 
Azospirillum sp. B510

Gene: AZL_d04800: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
 
Rhodospirillum centenum SW

Gene: RC1_1349: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
ivdE
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1834: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
 3
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010727: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)

Gene: Magn03003687: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)

Gene: Magn03008389: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
 2
Magnetospirillum magneticum AMB-1

Gene: amb3583: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)

Gene: amb2561: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
 
Azospirillum sp. B510

Gene: AZL_014060: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
 
Rhodospirillum centenum SW

Gene: RC1_1348: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
ivdF
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1833: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010731: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
Magnetospirillum magneticum AMB-1

Gene: amb3587: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
Azospirillum sp. B510

Gene: AZL_d04810: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
Rhodospirillum centenum SW

Gene: RC1_1347: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
 
CRON 3.
livG
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -108
score = 5.74583
sequence = CTTTACGTTTGCGTTAAG

Gene: Rru_A3510: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010732: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb3588: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
 
Azospirillum sp. B510

Gene: AZL_a02500: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
fadD
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3509: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010733: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Magnetospirillum magneticum AMB-1

Gene: amb3589: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Azospirillum sp. B510

Gene: AZL_a02510: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
livH
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3508: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
 2
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007376: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)

Gene: Magn03010734: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb3590: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
 
Azospirillum sp. B510

Gene: AZL_a02520: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
livM
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3507: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007377: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb3591: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
 
Azospirillum sp. B510

Gene: AZL_a02530: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
livK
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3506: ABC-type branched-chain amino acid transport systems, periplasmic component
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007378: ABC-type branched-chain amino acid transport systems, periplasmic component
 
Magnetospirillum magneticum AMB-1

Gene: amb3592: ABC-type branched-chain amino acid transport systems, periplasmic component
 
Azospirillum sp. B510

Gene: AZL_a02540: ABC-type branched-chain amino acid transport systems, periplasmic component
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
ABC-type branched-chain amino acid transport systems, periplasmic component
livF
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3505: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007379: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb3593: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
 
Azospirillum sp. B510

Gene: AZL_a02550: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
paaK
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A3504: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
 2
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007380: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)

Gene: Magn03008972: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
 
Magnetospirillum magneticum AMB-1

Gene: amb3594: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
 
Azospirillum sp. B510

Gene: AZL_a02560: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
 
CRON 4.
RC1_2763
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1

Gene: amb4148: alpha/beta hydrolase superfamily protein
 
Azospirillum sp. B510
*
Rhodospirillum centenum SW

Site:
position = -39
score = 5.58695
sequence = ATTTACCTTTACGTAAAG

Site:
position = -33
score = 5.30086
sequence = CTTTACGTAAAGGTAACC

Gene: RC1_2763: alpha/beta hydrolase superfamily protein
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
alpha/beta hydrolase superfamily protein
 
CRON 5.
fadL
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1313: Long-chain fatty acid transport protein
 2
Magnetospirillum magnetotacticum MS-1

Gene: Magn03001815: Long-chain fatty acid transport protein

Gene: Magn03001369: Long-chain fatty acid transport protein
 
Magnetospirillum magneticum AMB-1
*
Azospirillum sp. B510

Site:
position = -60
score = 5.23637
sequence = CTTTACGTAAGCGTCAAT

Gene: AZL_009620: Long-chain fatty acid transport protein
 
Rhodospirillum centenum SW

Gene: RC1_2482: Long-chain fatty acid transport protein
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Long-chain fatty acid transport protein
 
CRON 6.
liuR2
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -26
score = 5.16602
sequence = CTTGCCCTTTACGTAAAG

Gene: Rru_A1994: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
CRON 7.
fadD
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
*
Azospirillum sp. B510

Site:
position = -133
score = 5.68429
sequence = CATTACGTTTACGTCAAC

Site:
position = -127
score = 5.16791
sequence = GTTTACGTCAACGTCATA

Gene: AZL_012740: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
liuR
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1311: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
*2
Azospirillum sp. B510

Gene: AZL_012730: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

Site:
position = -39
score = 5.72205
sequence = CCTTACCTTTACGTAAAC

Site:
position = -33
score = 5.49467
sequence = CTTTACGTAAACGTCAGG

Gene: AZL_c00460: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
*
Rhodospirillum centenum SW

Site:
position = -80
score = 5.29479
sequence = ACTTACCTTTACGTAAAC

Site:
position = -74
score = 6.10705
sequence = CTTTACGTAAACGTAAAC

Gene: RC1_1949: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Rru_A1307
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_012720: hypothetical protein
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
hypothetical protein
etfB
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03006543: Electron transfer flavoprotein, beta subunit
 
Magnetospirillum magneticum AMB-1

Gene: amb3904: Electron transfer flavoprotein, beta subunit
 2
Azospirillum sp. B510

Gene: AZL_e01600: Electron transfer flavoprotein, beta subunit

Gene: AZL_012710: Electron transfer flavoprotein, beta subunit
*
Rhodospirillum centenum SW

Site:
position = -263
score = 5.6865
sequence = CTTTACGATTACGTAAAC

Site:
position = -257
score = 5.74023
sequence = GATTACGTAAACGTAAAC

Gene: RC1_4110: Electron transfer flavoprotein, beta subunit
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_2094: Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit
etfA
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008167: Electron transfer flavoprotein, alpha subunit
 
Magnetospirillum magneticum AMB-1

Gene: amb3903: Electron transfer flavoprotein, alpha subunit
 2
Azospirillum sp. B510

Gene: AZL_e01590: Electron transfer flavoprotein, alpha subunit

Gene: AZL_012700: Electron transfer flavoprotein, alpha subunit
 
Rhodospirillum centenum SW

Gene: RC1_4109: Electron transfer flavoprotein, alpha subunit
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_2093: Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit
acdA
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1310: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_c00470: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Rhodospirillum centenum SW

Gene: RC1_1948: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
acdB
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1309: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_c00480: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
 
Rhodospirillum centenum SW

Gene: RC1_1947: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
acdH
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1308: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510

Gene: AZL_c00490: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Rhodospirillum centenum SW

Gene: RC1_1946: Acyl-CoA dehydrogenase (EC 1.3.99.3)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Acyl-CoA dehydrogenase (EC 1.3.99.3)
RC1_4108
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW

Gene: RC1_4108: hypothetical protein
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
hypothetical protein
paaH
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008168: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Magnetospirillum magneticum AMB-1

Gene: amb3902: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Azospirillum sp. B510

Gene: AZL_e01580: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Rhodospirillum centenum SW

Gene: RC1_4107: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_2092: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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