Regulon of LiuR in Rhodospirillum centenum SW

Properties
Regulator type:	Transcription factor
TF locus tag:	RC1_1949
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Rhodospirillales
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Rhodospirillales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -263 Score: 5.7 Sequence: CTTTACGATTACGTAAAC Position: -257 Score: 5.7 Sequence: GATTACGTAAACGTAAAC Locus tag: RC1_4110 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: RC1_4109 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: RC1_4108 Name: null Funciton: hypothetical protein Locus tag: RC1_4107 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	RC1_4110	etfB	Electron transfer flavoprotein, beta subunit
	RC1_4109	etfA	Electron transfer flavoprotein, alpha subunit
	RC1_4108		hypothetical protein
	RC1_4107	paaH	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -80 Score: 5.3 Sequence: ACTTACCTTTACGTAAAC Position: -74 Score: 6.1 Sequence: CTTTACGTAAACGTAAAC Locus tag: RC1_1949 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: RC1_1948 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: RC1_1947 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: RC1_1946 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	RC1_1949	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	RC1_1948	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	RC1_1947	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	RC1_1946	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -39 Score: 5.6 Sequence: ATTTACCTTTACGTAAAG Position: -33 Score: 5.3 Sequence: CTTTACGTAAAGGTAACC Locus tag: RC1_2763 Name: null Funciton: alpha/beta hydrolase superfamily protein
	RC1_2763		alpha/beta hydrolase superfamily protein

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