Profile of regulator LiuR in Oceanospirillales/Alteromonadales
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Oceanospirillales/Alteromonadales |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Hahella chejuensis KCTC 2396 | |||||
| HCH_03687 | bkdA1 | -123 | 4.9 | GTTTACGTCAACGTCACT | |
| HCH_03687 | bkdA1 | -129 | 5.3 | GCTGACGTTTACGTCAAC | |
| HCH_03942 | liuR | -58 | 6 | GTTGACGTAAACGTAAAC | |
| HCH_03942 | liuR | -64 | 4.9 | TATAACGTTGACGTAAAC | |
| Marinobacter aqueolei | |||||
| Maqu_2878 | ldh | -172 | 5.8 | GTTGACGTTCACGTAAAC | |
| Maqu_1382 | bkdA1 | -130 | 6.2 | GTTTACGTTAAGGTAAAG | |
| Maqu_2119 | ivdG | -83 | 6.3 | GTTTACGTAAACGTAAAG | |
| Maqu_2119 | ivdG | -89 | 5.2 | GTTAAAGTTTACGTAAAC | |
| Maqu_2120 | liuR | -46 | 5.2 | GTTTACGTAAACTTTAAC | |
| Maqu_2120 | liuR | -52 | 6.3 | CTTTACGTTTACGTAAAC | |
| Marinobacter sp. ELB17 | |||||
| MELB17_05192 | paaG | -121 | 5.5 | GTTTACGTAAACGTTAGG | |
| MELB17_06329 | bkdA1 | -145 | 5.9 | CTTTACGTTAAGGTCAAC | |
| MELB17_07894 | ivdG | -58 | 6.3 | GTTTACGTAAACGTAAAG | |
| MELB17_07894 | ivdG | -64 | 5.2 | GTTAAAGTTTACGTAAAC | |
| MELB17_07889 | liuR | -45 | 5.2 | GTTTACGTAAACTTTAAC | |
| MELB17_07889 | liuR | -51 | 6.3 | CTTTACGTTTACGTAAAC | |
| Oceanospirillum sp. MED92 | |||||
| MED92_06078 | liuR | -65 | 4.6 | ATTGATCTTTACGTAAAC | |
| MED92_06108 | ivdA | -46 | 5.7 | GTTGACGTTTACGTCAAC | |
| MED92_12069 | aacS | -108 | 5.7 | GTTTCCGTTTACGTAAAC | |
| MED92_06078 | liuR | -59 | 6 | CTTTACGTAAACGTCAAC | |
| Reinekea sp. MED297 | |||||
| MED297_07476 | mmgB | -79 | 5.2 | GTTAACGTAAACGAAAAC | |
| MED297_07476 | mmgB | -85 | 6.2 | GTTGACGTTAACGTAAAC | |
| MED297_19182 | liuA | -60 | 4.9 | GTTTACGTCAACGTCACT | |
| MED297_19182 | liuA | -66 | 5.7 | GTTGACGTTTACGTCAAC | |
| MED297_07471 | liuR | -99 | 6.2 | GTTTACGTTAACGTCAAC | |
| MED297_07471 | liuR | -105 | 5.2 | GTTTTCGTTTACGTTAAC | |
| Alcanivorax borkumensis SK2 | |||||
| ABO_1713 | fabG | -16 | 5.1 | GTTTACCCTAAGGTAAAT | |
| ABO_1241 | liuR | -36 | 6.5 | CTTTACGTTAACGTAAAC | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |