Regulon of LiuR in Alcanivorax borkumensis SK2

Properties
Regulator type:	Transcription factor
TF locus tag:	ABO_1241
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Oceanospirillales/Alteromonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -16 Score: 5.1 Sequence: GTTTACCCTAAGGTAAAT Locus tag: ABO_1713 Name: fabG Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
	ABO_1713	fabG	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Position: -36 Score: 6.5 Sequence: CTTTACGTTAACGTAAAC Locus tag: ABO_1241 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: ABO_1240 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: ABO_1239 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: ABO_1238 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: ABO_1237 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: ABO_1236 Name: aacS Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
	ABO_1241	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	ABO_1240	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	ABO_1239	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	ABO_1238	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	ABO_1237	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	ABO_1236	aacS	Acetoacetyl-CoA synthetase (EC 6.2.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD