Regulon of LexA in Reinekea sp. MED297
| Regulator type: | Transcription factor |
| TF locus tag: | MED297_16754 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -31
Score: 5 Sequence: TACTGGTCATTCATACAGCA
Locus tag: MED297_13572
Name: recA Funciton: Recombinase A
Locus tag: MED297_13577
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -35
Score: 6.3 Sequence: TACTGTATATACATACAGTT
Locus tag: MED297_04849
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: MED297_04854
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: MED297_04859
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -82
Score: 5.8 Sequence: AACTGTATATATATACATAT
Locus tag: MED297_09676
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -30
Score: 5.7 Sequence: TACTGTTTATTTATACAGGC
Locus tag: MED297_16639
Name: sulA Funciton: Cell division inhibitor sulA |
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sulA
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Cell division inhibitor sulA
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Position: -28
Score: 5.8 Sequence: TACTGTATATATTAACAGGC
Locus tag: MED297_16754
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -28
Score: 5.4 Sequence: AACTGTATAAGCATACAGGT
Locus tag: MED297_03315
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -27
Score: 5.1 Sequence: CCCTGTTTTTTTATACAGTT
Locus tag: MED297_19917
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -45
Score: 5.9 Sequence: TACTGTATAAATATACATAT
Locus tag: MED297_04517
Name: intIA Funciton: Integron integrase IntI4 |
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intIA
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Integron integrase IntI4
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Position: -188
Score: 5.7 Sequence: GACTGTACACATATACAGTA
Locus tag: MED297_12852
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |