Regulon of IscR in Reinekea sp. MED297

Properties
Regulator type:	Transcription factor
TF locus tag:	MED297_14930
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	12
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 41 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -25 Score: 5.4 Sequence: ATATCTGAGCGATTTGGTAGGTTAT Locus tag: MED297_14062 Name: ydhD Funciton: Probable monothiol glutaredoxin ydhD
	MED297_14062	ydhD	Probable monothiol glutaredoxin ydhD
Position: -63 Score: 6.3 Sequence: ATAGTTGACTGTTTTGCTCAGGTAT Locus tag: MED297_10476 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	MED297_10476	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
Position: -86 Score: 6.2 Sequence: AAAGCTGACTAAATTACTCAGGTAT Locus tag: MED297_01820 Name: nfuA Funciton: NfuA Fe-S protein maturation
	MED297_01820	nfuA	NfuA Fe-S protein maturation
Position: -107 Score: 6.3 Sequence: ATAGTTGACTGTTTTGCTCAGGTAT Locus tag: MED297_14930 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: MED297_14935 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Locus tag: MED297_14940 Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB Locus tag: MED297_14945 Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC Locus tag: MED297_14950 Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD Locus tag: MED297_14955 Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Locus tag: MED297_14960 Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly Locus tag: MED297_14965 Name: sufT Funciton: Iron sulfur cluster assembly protein SufT Locus tag: MED297_14970 Name: sufE Funciton: Sulfur acceptor protein SufE for iron-sulfur cluster assembly
	MED297_14930	iscR	Iron-sulfur cluster regulator IscR
	MED297_14935	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	MED297_14940	sufB	Iron-sulfur cluster assembly protein SufB
	MED297_14945	sufC	Iron-sulfur cluster assembly ATPase protein SufC
	MED297_14950	sufD	Iron-sulfur cluster assembly protein SufD
	MED297_14955	sufS	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	MED297_14960	sufA	Iron binding protein SufA for iron-sulfur cluster assembly
	MED297_14965	sufT	Iron sulfur cluster assembly protein SufT
	MED297_14970	sufE	Sulfur acceptor protein SufE for iron-sulfur cluster assembly

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD