Regulon of NtrC in Reinekea sp. MED297

Properties
Regulator type:	Transcription factor
TF locus tag:	MED297_03702
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -217 Score: 5.3 Sequence: TGCACTATAATAGTGCT Locus tag: MED297_03707 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: MED297_03702 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	MED297_03707	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	MED297_03702	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -332 Score: 4.8 Sequence: CGCACCTATACGGTGCG Position: -314 Score: 4.3 Sequence: CGCCCTAAACTGGTGCG Locus tag: MED297_10311 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: MED297_10316 Name: amtB Funciton: Ammonium transporter
	MED297_10311	glnK	Nitrogen regulatory protein P-II
	MED297_10316	amtB	Ammonium transporter
Position: -245 Score: 4.9 Sequence: CGCACCAAAACAGCGCA Position: -232 Score: 4.8 Sequence: CGCACTTAGTTGGTGCA Locus tag: MED297_12572 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	MED297_12572	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD