Regulog NtrC - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Statistics of regulated genes
Genome	Genes	Operons
Hahella chejuensis KCTC 2396	10	4
Marinobacter aqueolei	18	4
Marinobacter sp. ELB17	17	4
Oceanobacter sp. RED65	14	4
Oceanospirillum sp. MED92	5	3
Marinomonas sp. MWYL1	5	3
Saccharophagus degradans 2-40	14	4
Teredinibacter turnerae T7901	18	5
Cellvibrio japonicus Ueda107	5	3
Chromohalobacter salexigens DSM 3043	18	4
Reinekea sp. MED297	5	3
Alcanivorax borkumensis SK2	14	5

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
urtA	* Hahella chejuensis KCTC 2396 Site: position = -256 score = 4.70013 sequence = TGCACCGCTTTGGTTCA Gene: HCH_04519: Urea ABC transporter, substrate-binding component	* Marinobacter aqueolei Site: position = -146 score = 4.53847 sequence = CGCACCAATTCATTGCA Site: position = -201 score = 4.48821 sequence = TGCACCAATTGAGGGCG Gene: Maqu_3001: Urea ABC transporter, substrate-binding component	* Marinobacter sp. ELB17 Site: position = -210 score = 4.3117 sequence = TGCACCAACTGTGAGCA Gene: MELB17_05409: Urea ABC transporter, substrate-binding component	Oceanobacter sp. RED65 Gene: RED65_07179: Urea ABC transporter, substrate-binding component	Oceanospirillum sp. MED92 Gene: MED92_11449: Urea ABC transporter, substrate-binding component	Marinomonas sp. MWYL1 Gene: Mmwyl1_0948: Urea ABC transporter, substrate-binding component	Saccharophagus degradans 2-40 Gene: Sde_0226: Urea ABC transporter, substrate-binding component	* Teredinibacter turnerae T7901 Site: position = -215 score = 4.59148 sequence = GGCACCTTAATGGTGCC Gene: TERTU_4200: Urea ABC transporter, substrate-binding component	Cellvibrio japonicus Ueda107 Gene: CJA_1241: Urea ABC transporter, substrate-binding component	* Chromohalobacter salexigens DSM 3043 Site: position = -162 score = 4.90822 sequence = TGCGCCATTTAGGTGCG Site: position = -225 score = 4.39672 sequence = TGCACTTTTCTGGTGCT Gene: Csal_2313: Urea ABC transporter, substrate-binding component	Reinekea sp. MED297 Gene: MED297_01160: Urea ABC transporter, substrate-binding component	Alcanivorax borkumensis SK2 Gene: ABO_2509: Urea ABC transporter, substrate-binding component	Urea ABC transporter, substrate-binding component
urtB	Hahella chejuensis KCTC 2396 Gene: HCH_04517: Urea ABC transporter, permease component 1	Marinobacter aqueolei Gene: Maqu_3000: Urea ABC transporter, permease component 1	Marinobacter sp. ELB17 Gene: MELB17_05414: Urea ABC transporter, permease component 1	Oceanobacter sp. RED65 Gene: RED65_07184: Urea ABC transporter, permease component 1	Oceanospirillum sp. MED92 Gene: MED92_11444: Urea ABC transporter, permease component 1	Marinomonas sp. MWYL1 Gene: Mmwyl1_0949: Urea ABC transporter, permease component 1	Saccharophagus degradans 2-40 Gene: Sde_0227: Urea ABC transporter, permease component 1	Teredinibacter turnerae T7901 Gene: TERTU_4199: Urea ABC transporter, permease component 1	Cellvibrio japonicus Ueda107 Gene: CJA_1240: Urea ABC transporter, permease component 1	Chromohalobacter salexigens DSM 3043 Gene: Csal_2312: Urea ABC transporter, permease component 1	Reinekea sp. MED297 Gene: MED297_01165: Urea ABC transporter, permease component 1	Alcanivorax borkumensis SK2 Gene: ABO_2510: Urea ABC transporter, permease component 1	Urea ABC transporter, permease component 1
urtC	Hahella chejuensis KCTC 2396 Gene: HCH_04516: Urea ABC transporter, permease component 2	Marinobacter aqueolei Gene: Maqu_2999: Urea ABC transporter, permease component 2	Marinobacter sp. ELB17 Gene: MELB17_05419: Urea ABC transporter, permease component 2	Oceanobacter sp. RED65 Gene: RED65_07189: Urea ABC transporter, permease component 2	Oceanospirillum sp. MED92 Gene: MED92_11439: Urea ABC transporter, permease component 2	Marinomonas sp. MWYL1 Gene: Mmwyl1_0950: Urea ABC transporter, permease component 2	Saccharophagus degradans 2-40 Gene: Sde_0228: Urea ABC transporter, permease component 2	Teredinibacter turnerae T7901 Gene: TERTU_4198: Urea ABC transporter, permease component 2	Cellvibrio japonicus Ueda107 Gene: CJA_1239: Urea ABC transporter, permease component 2	Chromohalobacter salexigens DSM 3043 Gene: Csal_2311: Urea ABC transporter, permease component 2	Reinekea sp. MED297 Gene: MED297_01170: Urea ABC transporter, permease component 2	Alcanivorax borkumensis SK2 Gene: ABO_2511: Urea ABC transporter, permease component 2	Urea ABC transporter, permease component 2
urtD	Hahella chejuensis KCTC 2396 Gene: HCH_04515: Urea ABC transporter, ATP-binding component 1	Marinobacter aqueolei Gene: Maqu_2998: Urea ABC transporter, ATP-binding component 1	Marinobacter sp. ELB17 Gene: MELB17_05424: Urea ABC transporter, ATP-binding component 1	Oceanobacter sp. RED65 Gene: RED65_07194: Urea ABC transporter, ATP-binding component 1	Oceanospirillum sp. MED92 Gene: MED92_11434: Urea ABC transporter, ATP-binding component 1	Marinomonas sp. MWYL1 Gene: Mmwyl1_0951: Urea ABC transporter, ATP-binding component 1	Saccharophagus degradans 2-40 Gene: Sde_0229: Urea ABC transporter, ATP-binding component 1	Teredinibacter turnerae T7901 Gene: TERTU_4197: Urea ABC transporter, ATP-binding component 1	Cellvibrio japonicus Ueda107 Gene: CJA_1238: Urea ABC transporter, ATP-binding component 1	Chromohalobacter salexigens DSM 3043 Gene: Csal_2310: Urea ABC transporter, ATP-binding component 1	Reinekea sp. MED297 Gene: MED297_01175: Urea ABC transporter, ATP-binding component 1	Alcanivorax borkumensis SK2 Gene: ABO_2512: Urea ABC transporter, ATP-binding component 1	Urea ABC transporter, ATP-binding component 1
urtE	Hahella chejuensis KCTC 2396 Gene: HCH_04514: Urea ABC transporter, ATP-binding component 2	Marinobacter aqueolei Gene: Maqu_2997: Urea ABC transporter, ATP-binding component 2	Marinobacter sp. ELB17 Gene: MELB17_05429: Urea ABC transporter, ATP-binding component 2	Oceanobacter sp. RED65 Gene: RED65_07199: Urea ABC transporter, ATP-binding component 2	Oceanospirillum sp. MED92 Gene: MED92_11429: Urea ABC transporter, ATP-binding component 2	Marinomonas sp. MWYL1 Gene: Mmwyl1_0952: Urea ABC transporter, ATP-binding component 2	Saccharophagus degradans 2-40 Gene: Sde_0230: Urea ABC transporter, ATP-binding component 2	Teredinibacter turnerae T7901 Gene: TERTU_4196: Urea ABC transporter, ATP-binding component 2	Cellvibrio japonicus Ueda107 Gene: CJA_1237: Urea ABC transporter, ATP-binding component 2	Chromohalobacter salexigens DSM 3043 Gene: Csal_2309: Urea ABC transporter, ATP-binding component 2	Reinekea sp. MED297 Gene: MED297_01180: Urea ABC transporter, ATP-binding component 2	Alcanivorax borkumensis SK2 Gene: ABO_2513: Urea ABC transporter, ATP-binding component 2	Urea ABC transporter, ATP-binding component 2
ureD	Hahella chejuensis KCTC 2396 Gene: HCH_04520: Urease accessory protein, UreD	Marinobacter aqueolei Gene: Maqu_2996: Urease accessory protein, UreD	Marinobacter sp. ELB17 Gene: MELB17_05434: Urease accessory protein, UreD	* Oceanobacter sp. RED65 Site: position = -65 score = 4.78038 sequence = TGCACCTTCGTGGTGCG Gene: RED65_07204: Urease accessory protein, UreD	Oceanospirillum sp. MED92 Gene: MED92_11424: Urease accessory protein, UreD	Marinomonas sp. MWYL1 Gene: Mmwyl1_0953: Urease accessory protein, UreD	* Saccharophagus degradans 2-40 Site: position = -160 score = 4.49807 sequence = TGCACAATAATGGTGTT Site: position = -137 score = 4.41254 sequence = CGCGCCCACTTGGTGCG Gene: Sde_0218: Urease accessory protein, UreD	* Teredinibacter turnerae T7901 Site: position = -29 score = 4.90056 sequence = TGCGTTAATATGGTGCA Gene: TERTU_4209: Urease accessory protein, UreD	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2308: Urease accessory protein, UreD	Reinekea sp. MED297 Gene: MED297_01185: Urease accessory protein, UreD	* Alcanivorax borkumensis SK2 Site: position = -47 score = 4.98321 sequence = TGCATAAATTTGGTGCA Gene: ABO_2722: Urease accessory protein, UreD	Urease accessory protein, UreD
ureA	Hahella chejuensis KCTC 2396 Gene: HCH_04521: Urease, gamma subunit (EC 3.5.1.5)	Marinobacter aqueolei Gene: Maqu_2995: Urease, gamma subunit (EC 3.5.1.5)	Marinobacter sp. ELB17 Gene: MELB17_05439: Urease, gamma subunit (EC 3.5.1.5)	Oceanobacter sp. RED65 Gene: RED65_07209: Urease, gamma subunit (EC 3.5.1.5)	Oceanospirillum sp. MED92 Gene: MED92_11419: Urease, gamma subunit (EC 3.5.1.5)	Marinomonas sp. MWYL1 Gene: Mmwyl1_0954: Urease, gamma subunit (EC 3.5.1.5)	Saccharophagus degradans 2-40 Gene: Sde_0219: Urease, gamma subunit (EC 3.5.1.5)	Teredinibacter turnerae T7901 Gene: TERTU_4208: Urease, gamma subunit (EC 3.5.1.5)	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2307: Urease, gamma subunit (EC 3.5.1.5)	Reinekea sp. MED297 Gene: MED297_01190: Urease, gamma subunit (EC 3.5.1.5)	Alcanivorax borkumensis SK2 Gene: ABO_2721: Urease, gamma subunit (EC 3.5.1.5)	Urease, gamma subunit (EC 3.5.1.5)
ureB	Hahella chejuensis KCTC 2396 Gene: HCH_04522: Urease, beta subunit (EC 3.5.1.5)	Marinobacter aqueolei Gene: Maqu_2994: Urease, beta subunit (EC 3.5.1.5)	Marinobacter sp. ELB17 Gene: MELB17_05444: Urease, beta subunit (EC 3.5.1.5)	Oceanobacter sp. RED65 Gene: RED65_07214: Urease, beta subunit (EC 3.5.1.5)	Oceanospirillum sp. MED92 Gene: MED92_11414: Urease, beta subunit (EC 3.5.1.5)	Marinomonas sp. MWYL1 Gene: Mmwyl1_0955: Urease, beta subunit (EC 3.5.1.5)	Saccharophagus degradans 2-40 Gene: Sde_0220: Urease, beta subunit (EC 3.5.1.5)	Teredinibacter turnerae T7901 Gene: TERTU_4207: Urease, beta subunit (EC 3.5.1.5)	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2306: Urease, beta subunit (EC 3.5.1.5)	Reinekea sp. MED297 Gene: MED297_01195: Urease, beta subunit (EC 3.5.1.5)	Alcanivorax borkumensis SK2 Gene: ABO_2720: Urease, beta subunit (EC 3.5.1.5)	Urease, beta subunit (EC 3.5.1.5)
ureC	Hahella chejuensis KCTC 2396 Gene: HCH_04523: Urease, alpha subunit (EC 3.5.1.5)	Marinobacter aqueolei Gene: Maqu_2993: Urease, alpha subunit (EC 3.5.1.5)	Marinobacter sp. ELB17 Gene: MELB17_05449: Urease, alpha subunit (EC 3.5.1.5)	Oceanobacter sp. RED65 Gene: RED65_07219: Urease, alpha subunit (EC 3.5.1.5)	Oceanospirillum sp. MED92 Gene: MED92_11409: Urease, alpha subunit (EC 3.5.1.5)	Marinomonas sp. MWYL1 Gene: Mmwyl1_0956: Urease, alpha subunit (EC 3.5.1.5)	Saccharophagus degradans 2-40 Gene: Sde_0221: Urease, alpha subunit (EC 3.5.1.5)	Teredinibacter turnerae T7901 Gene: TERTU_4206: Urease, alpha subunit (EC 3.5.1.5)	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2305: Urease, alpha subunit (EC 3.5.1.5)	Reinekea sp. MED297 Gene: MED297_01200: Urease, alpha subunit (EC 3.5.1.5)	Alcanivorax borkumensis SK2 Gene: ABO_2719: Urease, alpha subunit (EC 3.5.1.5)	Urease, alpha subunit (EC 3.5.1.5)
ureE	Hahella chejuensis KCTC 2396 Gene: HCH_04524: Urease accessory protein, UreE	Marinobacter aqueolei Gene: Maqu_2992: Urease accessory protein, UreE	Marinobacter sp. ELB17 Gene: MELB17_05454: Urease accessory protein, UreE	Oceanobacter sp. RED65 Gene: RED65_07224: Urease accessory protein, UreE	Oceanospirillum sp. MED92 Gene: MED92_11404: Urease accessory protein, UreE	Marinomonas sp. MWYL1 Gene: Mmwyl1_0957: Urease accessory protein, UreE	Saccharophagus degradans 2-40 Gene: Sde_0222: Urease accessory protein, UreE	Teredinibacter turnerae T7901 Gene: TERTU_4205: Urease accessory protein, UreE	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2304: Urease accessory protein, UreE	Reinekea sp. MED297 Gene: MED297_01205: Urease accessory protein, UreE	Alcanivorax borkumensis SK2 Gene: ABO_2718: Urease accessory protein, UreE	Urease accessory protein, UreE
ureF	Hahella chejuensis KCTC 2396 Gene: HCH_04525: Urease accessory protein, UreF	Marinobacter aqueolei Gene: Maqu_2991: Urease accessory protein, UreF	Marinobacter sp. ELB17 Gene: MELB17_05459: Urease accessory protein, UreF	Oceanobacter sp. RED65 Gene: RED65_07229: Urease accessory protein, UreF	Oceanospirillum sp. MED92 Gene: MED92_11399: Urease accessory protein, UreF	Marinomonas sp. MWYL1 Gene: Mmwyl1_0958: Urease accessory protein, UreF	Saccharophagus degradans 2-40 Gene: Sde_0223: Urease accessory protein, UreF	Teredinibacter turnerae T7901 Gene: TERTU_4204: Urease accessory protein, UreF	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2303: Urease accessory protein, UreF	Reinekea sp. MED297 Gene: MED297_01210: Urease accessory protein, UreF	Alcanivorax borkumensis SK2 Gene: ABO_2716: Urease accessory protein, UreF	Urease accessory protein, UreF
ureG	Hahella chejuensis KCTC 2396 Gene: HCH_04526: Urease accessory protein, UreG	Marinobacter aqueolei Gene: Maqu_2990: Urease accessory protein, UreG	Marinobacter sp. ELB17 Gene: MELB17_05464: Urease accessory protein, UreG	Oceanobacter sp. RED65 Gene: RED65_07234: Urease accessory protein, UreG	Oceanospirillum sp. MED92 Gene: MED92_11394: Urease accessory protein, UreG	Marinomonas sp. MWYL1 Gene: Mmwyl1_0959: Urease accessory protein, UreG	Saccharophagus degradans 2-40 Gene: Sde_0224: Urease accessory protein, UreG	Teredinibacter turnerae T7901 Gene: TERTU_4203: Urease accessory protein, UreG	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2302: Urease accessory protein, UreG	Reinekea sp. MED297 Gene: MED297_01215: Urease accessory protein, UreG	Alcanivorax borkumensis SK2 Gene: ABO_2715: Urease accessory protein, UreG	Urease accessory protein, UreG
ureJ	Hahella chejuensis KCTC 2396 Gene: HCH_04527: Urease accessory protein, UreJ	Marinobacter aqueolei Gene: Maqu_2989: Urease accessory protein, UreJ	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_07239: Urease accessory protein, UreJ	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_0960: Urease accessory protein, UreJ	Saccharophagus degradans 2-40 Gene: Sde_0225: Urease accessory protein, UreJ	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_2301: Urease accessory protein, UreJ	Reinekea sp. MED297 Gene: MED297_01220: Urease accessory protein, UreJ	Alcanivorax borkumensis SK2 Gene: ABO_2717: Urease accessory protein, UreJ	Urease accessory protein, UreJ

CRON 2.
PF09694	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	* Oceanobacter sp. RED65 Site: position = -245 score = 4.34414 sequence = TGCAACAAAATAGAGCT Site: position = -316 score = 4.33901 sequence = TGTTCTATTTTGGTGCT Gene: RED65_07244: Conserved hypothetical protein, nitrogen assimilation associated	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	* Saccharophagus degradans 2-40 Site: position = -193 score = 5.09216 sequence = TGCACCATATTTGTGCC Gene: Sde_0231: Conserved hypothetical protein, nitrogen assimilation associated	* Teredinibacter turnerae T7901 Site: position = -186 score = 4.56076 sequence = TGCACTCATATTGTGCT Gene: TERTU_4186: Conserved hypothetical protein, nitrogen assimilation associated	Cellvibrio japonicus Ueda107 Gene: CJA_0775: Conserved hypothetical protein, nitrogen assimilation associated	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	* Alcanivorax borkumensis SK2 Site: position = -195 score = 5.20377 sequence = CGCACCATTGCGGTGCA Gene: ABO_1930: Conserved hypothetical protein, nitrogen assimilation associated	Conserved hypothetical protein, nitrogen assimilation associated
glnK	* Hahella chejuensis KCTC 2396 Site: position = -193 score = 4.66229 sequence = TGCGCTATAATTGTGCC Site: position = -265 score = 5.12847 sequence = TGCACAAAATTTGTGCA Gene: HCH_06398: Nitrogen regulatory protein P-II	* Marinobacter aqueolei Site: position = -208 score = 5.22422 sequence = TGCACCACAACAGTGCA Gene: Maqu_0523: Nitrogen regulatory protein P-II	* Marinobacter sp. ELB17 Site: position = -208 score = 5.28639 sequence = CGCGCTATTATGGTGCA Gene: MELB17_20756: Nitrogen regulatory protein P-II	Oceanobacter sp. RED65 Gene: RED65_07249: Nitrogen regulatory protein P-II	* Oceanospirillum sp. MED92 Site: position = -222 score = 5.50606 sequence = AGCACCAAATTGGTGCA Site: position = -180 score = 4.31897 sequence = CGCCCCATTTTATTGCA Gene: MED92_06736: Nitrogen regulatory protein P-II	* Marinomonas sp. MWYL1 Site: position = -208 score = 4.45243 sequence = CGCACCAAGTTAACGCA Gene: Mmwyl1_3656: Nitrogen regulatory protein P-II	Saccharophagus degradans 2-40 Gene: Sde_0232: Nitrogen regulatory protein P-II	Teredinibacter turnerae T7901 Gene: TERTU_4185: Nitrogen regulatory protein P-II	* Cellvibrio japonicus Ueda107 Site: position = -241 score = 4.85719 sequence = TGCTTCATTTTGGTGCG Gene: CJA_3392: Nitrogen regulatory protein P-II	* Chromohalobacter salexigens DSM 3043 Site: position = -191 score = 5.22172 sequence = TGCGCCATGTTGGTGCA Gene: Csal_3161: Nitrogen regulatory protein P-II	* Reinekea sp. MED297 Site: position = -332 score = 4.7908 sequence = CGCACCTATACGGTGCG Site: position = -314 score = 4.30667 sequence = CGCCCTAAACTGGTGCG Gene: MED297_10311: Nitrogen regulatory protein P-II	* Alcanivorax borkumensis SK2 Site: position = -213 score = 4.95627 sequence = TGCCCCATTGTGGTGCG Site: position = -200 score = 4.94271 sequence = TGCGCTATAATGGCGCG Gene: ABO_2530: Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II
amtB	Hahella chejuensis KCTC 2396 Gene: HCH_06399: Ammonium transporter	Marinobacter aqueolei Gene: Maqu_0522: Ammonium transporter	Marinobacter sp. ELB17 Gene: MELB17_20761: Ammonium transporter	Oceanobacter sp. RED65 Gene: RED65_07254: Ammonium transporter	Oceanospirillum sp. MED92 Gene: MED92_06731: Ammonium transporter	Marinomonas sp. MWYL1 Gene: Mmwyl1_3657: Ammonium transporter	Saccharophagus degradans 2-40 Gene: Sde_0233: Ammonium transporter	Teredinibacter turnerae T7901 Gene: TERTU_4184: Ammonium transporter	Cellvibrio japonicus Ueda107 Gene: CJA_3391: Ammonium transporter	Chromohalobacter salexigens DSM 3043 Gene: Csal_3162: Ammonium transporter	Reinekea sp. MED297 Gene: MED297_10316: Ammonium transporter	Alcanivorax borkumensis SK2 Gene: ABO_2529: Ammonium transporter	Ammonium transporter

CRON 3.
glnA	* Hahella chejuensis KCTC 2396 Site: position = -287 score = 5.12587 sequence = GGCACCAACTTGGTGCA Gene: HCH_01036: Glutamine synthetase type I (EC 6.3.1.2)	* Marinobacter aqueolei Site: position = -297 score = 4.90457 sequence = TGCACCATAATTATGCG Site: position = -267 score = 5.37937 sequence = TGCACCACGATGGTGCA Site: position = -254 score = 5.0102 sequence = TGCACTGCAGTGGTGCA Gene: Maqu_0769: Glutamine synthetase type I (EC 6.3.1.2)	* Marinobacter sp. ELB17 Site: position = -292 score = 5.15502 sequence = CGCACAAATGTGGTGCA Gene: MELB17_20021: Glutamine synthetase type I (EC 6.3.1.2)	* Oceanobacter sp. RED65 Site: position = -245 score = 5.16571 sequence = TGCACTTTTATGGTGCG Site: position = -215 score = 4.37808 sequence = TGCACAACCTGAGTGCA Gene: RED65_16381: Glutamine synthetase type I (EC 6.3.1.2)	* Oceanospirillum sp. MED92 Site: position = -209 score = 5.37011 sequence = TGCTCTATTTTGGTGCA Site: position = -178 score = 5.37011 sequence = TGCTCTATTTTGGTGCA Gene: MED92_00650: Glutamine synthetase type I (EC 6.3.1.2)	* Marinomonas sp. MWYL1 Site: position = -252 score = 4.3499 sequence = CGCACCAACATGGAACA Site: position = -221 score = 4.75984 sequence = TGATCTAAAATGGTGCA Gene: Mmwyl1_0736: Glutamine synthetase type I (EC 6.3.1.2)	* Saccharophagus degradans 2-40 Site: position = -273 score = 5.06158 sequence = CGCACCACTTCAGTGCA Gene: Sde_0502: Glutamine synthetase type I (EC 6.3.1.2)	* Teredinibacter turnerae T7901 Site: position = -263 score = 4.32286 sequence = GGCGCCACACTGGTGCA Site: position = -234 score = 5.05191 sequence = CGCACCACTATGGCGCG Gene: TERTU_4421: Glutamine synthetase type I (EC 6.3.1.2)	* Cellvibrio japonicus Ueda107 Site: position = -288 score = 4.95877 sequence = CGCACCAATACAGTGCT Gene: CJA_3534: Glutamine synthetase type I (EC 6.3.1.2)	* Chromohalobacter salexigens DSM 3043 Site: position = -303 score = 5.33899 sequence = TGCACCCAAATGGTGCA Site: position = -272 score = 4.31973 sequence = TGCACCTTCATGATGCT Gene: Csal_0243: Glutamine synthetase type I (EC 6.3.1.2)	* Reinekea sp. MED297 Site: position = -245 score = 4.93193 sequence = CGCACCAAAACAGCGCA Site: position = -232 score = 4.82422 sequence = CGCACTTAGTTGGTGCA Gene: MED297_12572: Glutamine synthetase type I (EC 6.3.1.2)	* Alcanivorax borkumensis SK2 Site: position = -242 score = 5.211 sequence = TGCACTATTTTAGTGCC Site: position = -211 score = 4.52255 sequence = TGCACTGCATCTGTGCA Gene: ABO_2262: Glutamine synthetase type I (EC 6.3.1.2)	Glutamine synthetase type I (EC 6.3.1.2)

CRON 4.
ntrB	* Hahella chejuensis KCTC 2396 Site: position = -241 score = 4.77112 sequence = CGCACCAAAAAAGAGCA Gene: HCH_01034: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Marinobacter aqueolei Site: position = -211 score = 5.24474 sequence = CGCACCACCATGGTGCA Gene: Maqu_0767: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Marinobacter sp. ELB17 Site: position = -253 score = 5.00835 sequence = AGCACTATTTTGGTGCC Gene: MELB17_20031: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Oceanobacter sp. RED65 Site: position = -240 score = 5.28523 sequence = CGCACTATTTTGGTGCT Gene: RED65_16396: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Oceanospirillum sp. MED92 Site: position = -148 score = 5.27561 sequence = TGCACTGTTTTGGTGCG Gene: MED92_00655: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Marinomonas sp. MWYL1 Site: position = -74 score = 5.4175 sequence = TGCACTATAATTGTGCA Gene: Mmwyl1_0735: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Saccharophagus degradans 2-40 Site: position = -307 score = 4.85719 sequence = CGCACCATATTGAAGCA Gene: Sde_0500: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Teredinibacter turnerae T7901 Site: position = -344 score = 4.77773 sequence = AGCACCATTACAGCGCA Gene: TERTU_4423: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Cellvibrio japonicus Ueda107 Site: position = -152 score = 5.41987 sequence = AGCACCAAAATAGTGCA Gene: CJA_3536: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Chromohalobacter salexigens DSM 3043 Site: position = -98 score = 5.70871 sequence = TGCACTAATTTGGTGCA Gene: Csal_0245: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Reinekea sp. MED297 Site: position = -217 score = 5.33369 sequence = TGCACTATAATAGTGCT Gene: MED297_03707: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Alcanivorax borkumensis SK2 Site: position = -138 score = 5.33899 sequence = TGCACCCATATGGTGCA Gene: ABO_2260: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC	Hahella chejuensis KCTC 2396 Gene: HCH_01033: Nitrogen regulation protein NR(I), Fis family	Marinobacter aqueolei Gene: Maqu_0766: Nitrogen regulation protein NR(I), Fis family	Marinobacter sp. ELB17 Gene: MELB17_20036: Nitrogen regulation protein NR(I), Fis family	Oceanobacter sp. RED65 Gene: RED65_16401: Nitrogen regulation protein NR(I), Fis family	Oceanospirillum sp. MED92 Gene: MED92_00660: Nitrogen regulation protein NR(I), Fis family	Marinomonas sp. MWYL1 Gene: Mmwyl1_0734: Nitrogen regulation protein NR(I), Fis family	Saccharophagus degradans 2-40 Gene: Sde_0499: Nitrogen regulation protein NR(I), Fis family	Teredinibacter turnerae T7901 Gene: TERTU_4424: Nitrogen regulation protein NR(I), Fis family	Cellvibrio japonicus Ueda107 Gene: CJA_3537: Nitrogen regulation protein NR(I), Fis family	Chromohalobacter salexigens DSM 3043 Gene: Csal_0246: Nitrogen regulation protein NR(I), Fis family	Reinekea sp. MED297 Gene: MED297_03702: Nitrogen regulation protein NR(I), Fis family	Alcanivorax borkumensis SK2 Gene: ABO_2259: Nitrogen regulation protein NR(I), Fis family	Nitrogen regulation protein NR(I), Fis family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NtrC - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --