Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Marinobacter sp. ELB17

Properties
Regulator type: Transcription factor
TF locus tag: MELB17_20036
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 17
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 63 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -210
Score: 4.3
Sequence: TGCACCAACTGTGAGCA
Locus tag: MELB17_05409
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: MELB17_05414
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: MELB17_05419
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: MELB17_05424
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: MELB17_05429
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: MELB17_05434
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: MELB17_05439
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: MELB17_05444
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: MELB17_05449
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: MELB17_05454
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: MELB17_05459
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: MELB17_05464
Name: ureG
Funciton: Urease accessory protein, UreG
urtA
Urea ABC transporter, substrate-binding component
urtB
Urea ABC transporter, permease component 1
urtC
Urea ABC transporter, permease component 2
urtD
Urea ABC transporter, ATP-binding component 1
urtE
Urea ABC transporter, ATP-binding component 2
ureD
Urease accessory protein, UreD
ureA
Urease, gamma subunit (EC 3.5.1.5)
ureB
Urease, beta subunit (EC 3.5.1.5)
ureC
Urease, alpha subunit (EC 3.5.1.5)
ureE
Urease accessory protein, UreE
ureF
Urease accessory protein, UreF
ureG
Urease accessory protein, UreG

Position: -253
Score: 5
Sequence: AGCACTATTTTGGTGCC
Locus tag: MELB17_20031
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: MELB17_20036
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC
Nitrogen regulation protein NR(I), Fis family

Position: -292
Score: 5.2
Sequence: CGCACAAATGTGGTGCA
Locus tag: MELB17_20021
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -208
Score: 5.3
Sequence: CGCGCTATTATGGTGCA
Locus tag: MELB17_20756
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: MELB17_20761
Name: amtB
Funciton: Ammonium transporter
glnK
Nitrogen regulatory protein P-II
amtB
Ammonium transporter
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