Regulon of NtrC in Marinobacter sp. ELB17

Properties
Regulator type:	Transcription factor
TF locus tag:	MELB17_20036
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	17
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -210 Score: 4.3 Sequence: TGCACCAACTGTGAGCA Locus tag: MELB17_05409 Name: urtA Funciton: Urea ABC transporter, substrate-binding component Locus tag: MELB17_05414 Name: urtB Funciton: Urea ABC transporter, permease component 1 Locus tag: MELB17_05419 Name: urtC Funciton: Urea ABC transporter, permease component 2 Locus tag: MELB17_05424 Name: urtD Funciton: Urea ABC transporter, ATP-binding component 1 Locus tag: MELB17_05429 Name: urtE Funciton: Urea ABC transporter, ATP-binding component 2 Locus tag: MELB17_05434 Name: ureD Funciton: Urease accessory protein, UreD Locus tag: MELB17_05439 Name: ureA Funciton: Urease, gamma subunit (EC 3.5.1.5) Locus tag: MELB17_05444 Name: ureB Funciton: Urease, beta subunit (EC 3.5.1.5) Locus tag: MELB17_05449 Name: ureC Funciton: Urease, alpha subunit (EC 3.5.1.5) Locus tag: MELB17_05454 Name: ureE Funciton: Urease accessory protein, UreE Locus tag: MELB17_05459 Name: ureF Funciton: Urease accessory protein, UreF Locus tag: MELB17_05464 Name: ureG Funciton: Urease accessory protein, UreG
	MELB17_05409	urtA	Urea ABC transporter, substrate-binding component
	MELB17_05414	urtB	Urea ABC transporter, permease component 1
	MELB17_05419	urtC	Urea ABC transporter, permease component 2
	MELB17_05424	urtD	Urea ABC transporter, ATP-binding component 1
	MELB17_05429	urtE	Urea ABC transporter, ATP-binding component 2
	MELB17_05434	ureD	Urease accessory protein, UreD
	MELB17_05439	ureA	Urease, gamma subunit (EC 3.5.1.5)
	MELB17_05444	ureB	Urease, beta subunit (EC 3.5.1.5)
	MELB17_05449	ureC	Urease, alpha subunit (EC 3.5.1.5)
	MELB17_05454	ureE	Urease accessory protein, UreE
	MELB17_05459	ureF	Urease accessory protein, UreF
	MELB17_05464	ureG	Urease accessory protein, UreG
Position: -253 Score: 5 Sequence: AGCACTATTTTGGTGCC Locus tag: MELB17_20031 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: MELB17_20036 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	MELB17_20031	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	MELB17_20036	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -292 Score: 5.2 Sequence: CGCACAAATGTGGTGCA Locus tag: MELB17_20021 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	MELB17_20021	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -208 Score: 5.3 Sequence: CGCGCTATTATGGTGCA Locus tag: MELB17_20756 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: MELB17_20761 Name: amtB Funciton: Ammonium transporter
	MELB17_20756	glnK	Nitrogen regulatory protein P-II
	MELB17_20761	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Marinobacter sp. ELB17

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --