Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing urtD gene

Properties
Regulog: NtrC - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 63 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chromohalobacter salexigens DSM 3043
Position: -225
Score: 4.39672
Sequence: TGCACTTTTCTGGTGCT
Position: -162
Score: 4.90822
Sequence: TGCGCCATTTAGGTGCG
Locus tag: Csal_2313
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: Csal_2312
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: Csal_2311
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: Csal_2310
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: Csal_2309
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: Csal_2308
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: Csal_2307
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: Csal_2306
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: Csal_2305
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: Csal_2304
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: Csal_2303
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: Csal_2302
Name: ureG
Funciton: Urease accessory protein, UreG
Locus tag: Csal_2301
Name: ureJ
Funciton: Urease accessory protein, UreJ
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-ureC-ureE-ureF-ureG-ureJ -225 4.4 TGCACTTTTCTGGTGCT Csal_2313
-162 4.9 TGCGCCATTTAGGTGCG
Hahella chejuensis KCTC 2396
Position: -256
Score: 4.70013
Sequence: TGCACCGCTTTGGTTCA
Locus tag: HCH_04519
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: HCH_04517
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: HCH_04516
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: HCH_04515
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: HCH_04514
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
urtA-urtB-urtC-urtD-urtE -256 4.7 TGCACCGCTTTGGTTCA HCH_04519
Marinobacter aqueolei
Position: -201
Score: 4.48821
Sequence: TGCACCAATTGAGGGCG
Position: -146
Score: 4.53847
Sequence: CGCACCAATTCATTGCA
Locus tag: Maqu_3001
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: Maqu_3000
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: Maqu_2999
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: Maqu_2998
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: Maqu_2997
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: Maqu_2996
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: Maqu_2995
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: Maqu_2994
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: Maqu_2993
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: Maqu_2992
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: Maqu_2991
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: Maqu_2990
Name: ureG
Funciton: Urease accessory protein, UreG
Locus tag: Maqu_2989
Name: ureJ
Funciton: Urease accessory protein, UreJ
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-ureC-ureE-ureF-ureG-ureJ -201 4.5 TGCACCAATTGAGGGCG Maqu_3001
-146 4.5 CGCACCAATTCATTGCA
Marinobacter sp. ELB17
Position: -210
Score: 4.3117
Sequence: TGCACCAACTGTGAGCA
Locus tag: MELB17_05409
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: MELB17_05414
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: MELB17_05419
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: MELB17_05424
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: MELB17_05429
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: MELB17_05434
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: MELB17_05439
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: MELB17_05444
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: MELB17_05449
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: MELB17_05454
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: MELB17_05459
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: MELB17_05464
Name: ureG
Funciton: Urease accessory protein, UreG
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-ureC-ureE-ureF-ureG -210 4.3 TGCACCAACTGTGAGCA MELB17_05409
Teredinibacter turnerae T7901
Position: -215
Score: 4.59148
Sequence: GGCACCTTAATGGTGCC
Locus tag: TERTU_4200
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: TERTU_4199
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: TERTU_4198
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: TERTU_4197
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: TERTU_4196
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
urtA-urtB-urtC-urtD-urtE -215 4.6 GGCACCTTAATGGTGCC TERTU_4200