Regulon of NtrC in Chromohalobacter salexigens DSM 3043

Properties
Regulator type:	Transcription factor
TF locus tag:	Csal_0246
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	18
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -225 Score: 4.4 Sequence: TGCACTTTTCTGGTGCT Position: -162 Score: 4.9 Sequence: TGCGCCATTTAGGTGCG Locus tag: Csal_2313 Name: urtA Funciton: Urea ABC transporter, substrate-binding component Locus tag: Csal_2312 Name: urtB Funciton: Urea ABC transporter, permease component 1 Locus tag: Csal_2311 Name: urtC Funciton: Urea ABC transporter, permease component 2 Locus tag: Csal_2310 Name: urtD Funciton: Urea ABC transporter, ATP-binding component 1 Locus tag: Csal_2309 Name: urtE Funciton: Urea ABC transporter, ATP-binding component 2 Locus tag: Csal_2308 Name: ureD Funciton: Urease accessory protein, UreD Locus tag: Csal_2307 Name: ureA Funciton: Urease, gamma subunit (EC 3.5.1.5) Locus tag: Csal_2306 Name: ureB Funciton: Urease, beta subunit (EC 3.5.1.5) Locus tag: Csal_2305 Name: ureC Funciton: Urease, alpha subunit (EC 3.5.1.5) Locus tag: Csal_2304 Name: ureE Funciton: Urease accessory protein, UreE Locus tag: Csal_2303 Name: ureF Funciton: Urease accessory protein, UreF Locus tag: Csal_2302 Name: ureG Funciton: Urease accessory protein, UreG Locus tag: Csal_2301 Name: ureJ Funciton: Urease accessory protein, UreJ
	Csal_2313	urtA	Urea ABC transporter, substrate-binding component
	Csal_2312	urtB	Urea ABC transporter, permease component 1
	Csal_2311	urtC	Urea ABC transporter, permease component 2
	Csal_2310	urtD	Urea ABC transporter, ATP-binding component 1
	Csal_2309	urtE	Urea ABC transporter, ATP-binding component 2
	Csal_2308	ureD	Urease accessory protein, UreD
	Csal_2307	ureA	Urease, gamma subunit (EC 3.5.1.5)
	Csal_2306	ureB	Urease, beta subunit (EC 3.5.1.5)
	Csal_2305	ureC	Urease, alpha subunit (EC 3.5.1.5)
	Csal_2304	ureE	Urease accessory protein, UreE
	Csal_2303	ureF	Urease accessory protein, UreF
	Csal_2302	ureG	Urease accessory protein, UreG
	Csal_2301	ureJ	Urease accessory protein, UreJ
Position: -191 Score: 5.2 Sequence: TGCGCCATGTTGGTGCA Locus tag: Csal_3161 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Csal_3162 Name: amtB Funciton: Ammonium transporter
	Csal_3161	glnK	Nitrogen regulatory protein P-II
	Csal_3162	amtB	Ammonium transporter
Position: -303 Score: 5.3 Sequence: TGCACCCAAATGGTGCA Position: -272 Score: 4.3 Sequence: TGCACCTTCATGATGCT Locus tag: Csal_0243 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Csal_0243	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -98 Score: 5.7 Sequence: TGCACTAATTTGGTGCA Locus tag: Csal_0245 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Csal_0246 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Csal_0245	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Csal_0246	ntrC	Nitrogen regulation protein NR(I), Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Chromohalobacter salexigens DSM 3043

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --