Regulon of NtrC in Hahella chejuensis KCTC 2396

Properties
Regulator type:	Transcription factor
TF locus tag:	HCH_01033
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -241 Score: 4.8 Sequence: CGCACCAAAAAAGAGCA Locus tag: HCH_01034 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: HCH_01033 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	HCH_01034	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	HCH_01033	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -256 Score: 4.7 Sequence: TGCACCGCTTTGGTTCA Locus tag: HCH_04519 Name: urtA Funciton: Urea ABC transporter, substrate-binding component Locus tag: HCH_04517 Name: urtB Funciton: Urea ABC transporter, permease component 1 Locus tag: HCH_04516 Name: urtC Funciton: Urea ABC transporter, permease component 2 Locus tag: HCH_04515 Name: urtD Funciton: Urea ABC transporter, ATP-binding component 1 Locus tag: HCH_04514 Name: urtE Funciton: Urea ABC transporter, ATP-binding component 2
	HCH_04519	urtA	Urea ABC transporter, substrate-binding component
	HCH_04517	urtB	Urea ABC transporter, permease component 1
	HCH_04516	urtC	Urea ABC transporter, permease component 2
	HCH_04515	urtD	Urea ABC transporter, ATP-binding component 1
	HCH_04514	urtE	Urea ABC transporter, ATP-binding component 2
Position: -265 Score: 5.1 Sequence: TGCACAAAATTTGTGCA Position: -193 Score: 4.7 Sequence: TGCGCTATAATTGTGCC Locus tag: HCH_06398 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: HCH_06399 Name: amtB Funciton: Ammonium transporter
	HCH_06398	glnK	Nitrogen regulatory protein P-II
	HCH_06399	amtB	Ammonium transporter
Position: -287 Score: 5.1 Sequence: GGCACCAACTTGGTGCA Locus tag: HCH_01036 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	HCH_01036	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD