Regulon of PrpR in Reinekea sp. MED297
| Regulator type: | Transcription factor |
| TF locus tag: | MED297_14280 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Regulog: | PrpR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - PrpR
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -77
Score: 4.9 Sequence: ATTGTTAACAAT
Position: -14
Score: 4.2 Sequence: ATTGTTAACAAA
Locus tag: MED297_14280
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MED297_14285
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MED297_14290
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: MED297_14295
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: MED297_14300
Name: prpF Funciton: Aconitase accessory protein PrpF |
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prpR
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Propionate catabolism transcriptional regulator, GntR family
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prpB
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Methylisocitrate lyase (EC 4.1.3.30)
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prpC
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2-methylcitrate synthase (EC 2.3.3.5)
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acnD
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Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
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prpF
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Aconitase accessory protein PrpF
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Position: -93
Score: 4.9 Sequence: ATTGTTAACAAT
Position: -31
Score: 4.9 Sequence: ATTGTTAACAAT
Locus tag: MED297_04744
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
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prpE
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Propionyl-CoA synthetase (EC 6.2.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |