Profile of regulator PrpR in Oceanospirillales/Alteromonadales
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Regulog: | PrpR - Oceanospirillales/Alteromonadales |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - PrpR
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Hahella chejuensis KCTC 2396 | |||||
| HCH_02709 | prpR | -74 | 4.8 | ATTGTTTACAAT | |
| HCH_02709 | prpR | -12 | 4.7 | ATTGTAAACAAT | |
| Marinobacter aqueolei | |||||
| Maqu_1730 | prpE | -52 | 4.3 | GTTGTCGATAAC | |
| Maqu_1667 | prpR | -66 | 5.4 | ATTGTTGACAAT | |
| Maqu_1667 | prpR | -14 | 4.2 | ATTGTTAACAAA | |
| Marinobacter sp. ELB17 | |||||
| MELB17_14501 | prpR | -65 | 5.4 | ATTGTTGACAAT | |
| MELB17_14501 | prpR | -14 | 4.2 | ATTGTTAACAAA | |
| Oceanobacter sp. RED65 | |||||
| RED65_03680 | prpR | -16 | 5.1 | ATTGTAGACAAT | |
| RED65_03680 | prpR | -78 | 4.6 | TTTGTCTACAAT | |
| Oceanospirillum sp. MED92 | |||||
| MED92_10499 | prpE | -71 | 4.6 | ACTGTCTACAAT | |
| MED92_10499 | prpE | -222 | 5.8 | ATTGTCGACAAT | |
| MED92_04442 | prpR | -93 | 4.1 | TGTGTTGACAAT | |
| MED92_04442 | prpR | -21 | 5.8 | ATTGTCGACAAT | |
| Marinomonas sp. MWYL1 | |||||
| Mmwyl1_0926 | prpR | -30 | 5.4 | ATTGTCAACAAT | |
| Mmwyl1_0926 | prpR | -268 | 4.7 | ATTGTCGACACA | |
| Mmwyl1_0926 | prpR | -83 | 5.8 | ATTGTCGACAAT | |
| Chromohalobacter salexigens DSM 3043 | |||||
| Csal_2422 | prpR | -132 | 5.8 | ATTGTCGACAAT | |
| Csal_2422 | prpR | -15 | 5.8 | ATTGTCGACAAT | |
| Csal_2058 | acnB | -143 | 5.3 | ATTGTCGACAGT | |
| Reinekea sp. MED297 | |||||
| MED297_04744 | prpE | -93 | 4.9 | ATTGTTAACAAT | |
| MED297_14280 | prpR | -77 | 4.9 | ATTGTTAACAAT | |
| MED297_14280 | prpR | -14 | 4.2 | ATTGTTAACAAA | |
| MED297_04744 | prpE | -31 | 4.9 | ATTGTTAACAAT | |
| Alcanivorax borkumensis SK2 | |||||
| ABO_1434 | prpR | -86 | 5.4 | ATTGTCAACAAT | |
| ABO_1434 | prpR | -23 | 5.4 | ATTGTCAACAAT | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |