Regulog RpoN - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | Sigma54 |
| Regulation mode: | |
| Biological process: | Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism |
| Effector: | |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Sigma54
- By pathway - Zinc homeostasis
- By pathway - Nitrogen metabolism
- By pathway - Motility
- By pathway - Metabolite transport
- By pathway - Intercellular adhesion
- By pathway - Cell wall metabolism
| Genome | Genes | Operons |
|---|---|---|
| Desulfohalobium retbaense DSM 5692 | 70 | 15 |
| Desulfomicrobium baculatum DSM 4028 | 156 | 57 |
| Desulfovibrio desulfuricans G20 | 178 | 66 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 106 | 45 |
| Desulfovibrio magneticus RS-1 | 157 | 45 |
| Desulfovibrio piger ATCC 29098 | 68 | 18 |
| Desulfovibrio salexigens DSM 2638 | 130 | 53 |
| Desulfovibrio vulgaris Hildenborough | 266 | 81 |
| Desulfovibrio vulgaris str. Miyazaki F | 223 | 73 |
| Lawsonia intracellularis PHE/MN1-00 | 39 | 19 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| zraP |
*
Desulfohalobium retbaense DSM 5692 Site: position = -78 score = 4.95217 sequence = TTTGGCACGCCCAATGCAT Gene: Dret_2390: Zinc resistance-associated protein |
*2
Desulfomicrobium baculatum DSM 4028 Site: position = -81 score = 4.99036 sequence = ATTGGCACGGCGTCTGCTA Gene: Dbac_2711: Zinc resistance-associated protein Site: position = -63 score = 4.77814 sequence = TCTGGCACGGCACTTGATA Gene: Dbac_1014: Zinc resistance-associated protein |
*2
Desulfovibrio desulfuricans G20 Site: position = -78 score = 5.32299 sequence = TATGGCACGCCTGTTGCTC Gene: Dde_0111: Zinc resistance-associated protein Site: position = -59 score = 5.17357 sequence = TTTGGCACACCTGTTGCTG Gene: Dde_2819: Zinc resistance-associated protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -134 score = 4.27003 sequence = AGTTGCATGATTTTTGCAA Gene: Ddes_0185: Zinc resistance-associated protein |
*2
Desulfovibrio magneticus RS-1 Site: position = -101 score = 4.97822 sequence = CATGGCACGGATGCTGCTT Gene: DMR_37280: Zinc resistance-associated protein Site: position = -101 score = 4.86133 sequence = GTTGGCACGGCTGCTGCAA Gene: DMR_45210: Zinc resistance-associated protein |
*2
Desulfovibrio piger ATCC 29098 Site: position = -110 score = 5.13367 sequence = TTTGGCACGCGGGTTGCTA Gene: DESPIG_02788: Zinc resistance-associated protein Site: position = -128 score = 4.43128 sequence = GCTTGCATGTTTTTTGCAA Gene: DESPIG_02787: Zinc resistance-associated protein |
*2
Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 5.16557 sequence = TTTGGCACGGGCCATGCTT Gene: Desal_0681: Zinc resistance-associated protein Site: position = -67 score = 4.89388 sequence = TTTGGCACAGCACGTGCTT Gene: Desal_0680: Zinc resistance-associated protein |
*2
Desulfovibrio vulgaris Hildenborough Site: position = -60 score = 5.07105 sequence = TGTGGCACGCTATCTGCTT Gene: DVU0036: Zinc resistance-associated protein Site: position = -82 score = 5.20827 sequence = TTTGGCACGCTCCATGCTC Gene: DVU3384: Zinc resistance-associated protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -139 score = 5.11523 sequence = CTTGGCACGCCGGTTGCTC Gene: DvMF_2147: Zinc resistance-associated protein |
|
Zinc resistance-associated protein |
| DVU1418 |
Gene: Dret_2391: PAS/PAC sensor signal transduction histidine kinase |
Gene: Dbac_2712: PAS/PAC sensor signal transduction histidine kinase |
*
Desulfovibrio desulfuricans G20 Site: position = -54 score = 4.57031 sequence = TTTGGCACGTGTTTTTCAT Gene: Dde_1684: PAS/PAC sensor signal transduction histidine kinase |
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Gene: Desal_0678: PAS/PAC sensor signal transduction histidine kinase |
*
Desulfovibrio vulgaris Hildenborough Site: position = -46 score = 4.36905 sequence = TTCGGCACAGTTCTTTCAT Gene: DVU1418: PAS/PAC sensor signal transduction histidine kinase |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -90 score = 4.22844 sequence = GTTGGCACGAGGTTTTCAT Gene: DvMF_0213: PAS/PAC sensor signal transduction histidine kinase |
|
PAS/PAC sensor signal transduction histidine kinase |
| DVU1419 |
Gene: Dret_2392: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dbac_2713: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dde_1685: two component, sigma54 specific, transcriptional regulator, Fis family |
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Gene: Desal_0677: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DVU1419: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DvMF_0215: two component, sigma54 specific, transcriptional regulator, Fis family |
|
two component, sigma54 specific, transcriptional regulator, Fis family |
| lpxC |
*
Desulfohalobium retbaense DSM 5692 Site: position = -40 score = 4.85191 sequence = CGTGGAATGATTTTTGCTT Gene: Dret_2081: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -29 score = 4.42198 sequence = TCTGGCATGAAGTTTGATA Gene: Dbac_2789: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
*
Desulfovibrio desulfuricans G20 Site: position = -41 score = 4.84591 sequence = AACGGCACGATTATTGCTT Gene: Dde_2986: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -43 score = 4.60369 sequence = GATGGCATATTATTTGCTG Gene: Desal_2604: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -196 score = 4.03972 sequence = GACGGCAAGCCGCCTGCTG Site: position = -40 score = 5.33214 sequence = TCTGGCACATCTTTTGCTT Gene: DVU2917: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -38 score = 5.25113 sequence = TTTGGCACGGTTCATGCTC Gene: DvMF_1446: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -40 score = 4.26793 sequence = TTTGGATCGTTTATTGCAT Gene: LI0627: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) |
| CRON 2. | |||||||||||
| DVU2957 |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -65 score = 4.70204 sequence = GCTGGCACGGAACTTGTTA Gene: DVU2957: hypothetical protein |
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hypothetical protein |
| DVU2957 |
Gene: Dret_2118: protein of unknown function DUF81 |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -101 score = 5.15765 sequence = GCTGGCATGGTCTTTGCCT Gene: Dbac_2264: protein of unknown function DUF81 |
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = 47 score = 4.03633 sequence = TATGGCAAAGCTCCTGTTG Gene: Ddes_0811: protein of unknown function DUF81 |
*
Desulfovibrio magneticus RS-1 Site: position = -132 score = 3.93495 sequence = AAAGGCACAATCCTTGATA Gene: DMR_40120: protein of unknown function DUF81 |
Gene: DESPIG_00050: protein of unknown function DUF81 |
|
Gene: DVU2958: protein of unknown function DUF81 |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -205 score = 4.5015 sequence = GATGGCACGAAACTTGTTA Gene: DvMF_1764: protein of unknown function DUF81 |
|
protein of unknown function DUF81 |
| DVU2959 |
Gene: Dret_2119: hypothetical membrane protein |
Gene: Dbac_2265: hypothetical membrane protein |
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Gene: Ddes_0812: hypothetical membrane protein |
Gene: DMR_40110: hypothetical membrane protein |
Gene: DESPIG_00049: hypothetical membrane protein |
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Gene: DVU2959: hypothetical membrane protein |
Gene: DvMF_1765: hypothetical membrane protein |
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hypothetical membrane protein |
| DVU2960 |
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Gene: Dbac_2266: putative sigma54 specific transcriptional regulator |
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Gene: DMR_40100: putative sigma54 specific transcriptional regulator |
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Gene: DVU2960: putative sigma54 specific transcriptional regulator |
Gene: DvMF_1766: putative sigma54 specific transcriptional regulator |
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putative sigma54 specific transcriptional regulator |
| DVU2961 |
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Gene: Dbac_2267: hypothetical protein |
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Gene: DMR_40090: hypothetical protein |
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Gene: Desal_3505: hypothetical protein |
Gene: DVU2961: hypothetical protein |
Gene: DvMF_1767: hypothetical protein |
|
hypothetical protein |
| DVU2962 |
|
Gene: Dbac_2268: integral membrane sensor signal transduction histidine kinase |
Gene: Dde_0320: integral membrane sensor signal transduction histidine kinase |
Gene: Ddes_0813: integral membrane sensor signal transduction histidine kinase |
Gene: DMR_40080: integral membrane sensor signal transduction histidine kinase |
Gene: DESPIG_00048: integral membrane sensor signal transduction histidine kinase |
Gene: Desal_1133: integral membrane sensor signal transduction histidine kinase |
Gene: DVU2962: integral membrane sensor signal transduction histidine kinase |
Gene: DvMF_1768: integral membrane sensor signal transduction histidine kinase |
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integral membrane sensor signal transduction histidine kinase |
| DVU2963 |
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Gene: Dbac_2269: response regulator receiver protein |
Gene: Dde_0321: response regulator receiver protein |
Gene: Ddes_0814: response regulator receiver protein |
Gene: DMR_40070: response regulator receiver protein |
Gene: DESPIG_00047: response regulator receiver protein |
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Gene: DVU2963: response regulator receiver protein |
Gene: DvMF_1769: response regulator receiver protein |
|
response regulator receiver protein |
| DVU2964 |
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Gene: Dbac_2270: hypothetical protein |
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Gene: Ddes_0815: hypothetical protein |
Gene: DMR_40060: hypothetical protein |
Gene: DESPIG_00046: hypothetical protein |
Gene: Desal_1135: hypothetical protein |
Gene: DVU2964: hypothetical protein |
Gene: DvMF_1770: hypothetical protein |
|
hypothetical protein |
| DVU2965 |
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Gene: DVU2965: hypothetical protein |
Gene: DvMF_1771: hypothetical protein |
|
hypothetical protein |
| DVU2966 |
|
2
Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2271: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Gene: Dbac_2273: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: Dde_0324: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: Ddes_0816: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: DMR_40050: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: DESPIG_00045: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
*2
Desulfovibrio salexigens DSM 2638 Site: position = -81 score = 4.31901 sequence = TCTGGCATAACGAGTGCTT Gene: Desal_3506: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Gene: Desal_1134: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: DVU2966: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
Gene: DvMF_1772: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| DVU2967 |
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Gene: Dbac_2272: response regulator receiver sensor signal transduction histidine kinase |
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Gene: Ddes_0817: response regulator receiver sensor signal transduction histidine kinase |
Gene: DMR_40040: response regulator receiver sensor signal transduction histidine kinase |
Gene: DESPIG_00044: response regulator receiver sensor signal transduction histidine kinase |
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Gene: DVU2967: response regulator receiver sensor signal transduction histidine kinase |
Gene: DvMF_1773: response regulator receiver sensor signal transduction histidine kinase |
|
response regulator receiver sensor signal transduction histidine kinase |
| Dde_0323 |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -187 score = 5.24205 sequence = GTTGGCACGTTCCTTGCCT Gene: Dde_0323: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| Dde_0325 |
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Gene: Dde_0325: CBS domain containing protein |
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Gene: Desal_3507: CBS domain containing protein |
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CBS domain containing protein |
| Dde_0326 |
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Gene: Dde_0326: Di- and tricarboxylate transporters |
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Gene: Desal_3508: Di- and tricarboxylate transporters |
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Di- and tricarboxylate transporters |
| Dde_0327 |
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Gene: Dde_0327: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Gene: Desal_1136: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| Dde_0328 |
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Gene: Dde_0328: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Gene: Desal_1132: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| Dde_0318 |
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*
Desulfovibrio desulfuricans G20 Site: position = 18 score = 4.47474 sequence = AAAGGCACGGCTTCTGCTG Gene: Dde_0318: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Gene: Desal_3504: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Gene: DvMF_1213: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| Dde_0319 |
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Gene: Dde_0319: hypothetical protein |
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Gene: DvMF_1212: hypothetical protein |
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hypothetical protein |
| CRON 3. | |||||||||||
| DVUA0030 |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -68 score = 4.26693 sequence = TATGGAGTGCTACTTGCAA Gene: DVUA0030: PEP-CTERM motif protein |
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PEP-CTERM motif protein |
| CRON 4. | |||||||||||
| Dbac_1321 |
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Gene: Dbac_1321: hypothetical protein |
Gene: Dde_2949: DNA-binding protein, putative |
Gene: Ddes_0868: DNA-binding protein, putative |
Gene: DMR_23570: hypothetical protein |
Gene: DESPIG_03022: hypothetical protein |
Gene: Desal_0117: putative phage repressor |
*
Desulfovibrio vulgaris Hildenborough Site: position = -200 score = 4.8756 sequence = GGTGGCCCGATTTTTGCTC Gene: DVU0682: DNA-binding protein, putative |
Gene: DvMF_2676: DNA-binding protein, putative |
Gene: LI0677: DNA-binding protein, putative |
hypothetical protein |
| CRON 5. | |||||||||||
| amiE |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -110 score = 4.58227 sequence = TTTGGCACACTTGTCGCTA Gene: DVU1164: Formamidase amiF (EC 3.5.1.49) |
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Formamidase amiF (EC 3.5.1.49) |
| CRON 6. | |||||||||||
| DVUA0036 |
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*
Desulfomicrobium baculatum DSM 4028 Site: position = -311 score = 3.90797 sequence = CCGGGCATTGAACTTGCTC Gene: Dbac_2224: PEP-CTERM system TPR-repeat lipoprotein |
*
Desulfovibrio desulfuricans G20 Site: position = -94 score = 4.79762 sequence = TGTGGCACGGTTTTGGCTA Gene: Dde_0828: PEP-CTERM system TPR-repeat lipoprotein |
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*
Desulfovibrio vulgaris Hildenborough Site: position = 29 score = 4.47399 sequence = TGTGGCACGGTATTGGCTC Gene: DVUA0036: PEP-CTERM system TPR-repeat lipoprotein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -61 score = 4.34041 sequence = GCTGGCATGGTATTGGCTC Gene: DvMF_0691: PEP-CTERM system TPR-repeat lipoprotein |
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PEP-CTERM system TPR-repeat lipoprotein |
| pss |
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Gene: Dbac_2223: Exopolysaccharide production protein Pss (pss) |
Gene: Dde_0829: Exopolysaccharide production protein Pss (pss) |
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Gene: DVUA0037: Exopolysaccharide production protein Pss (pss) |
Gene: DvMF_0690: Exopolysaccharide production protein Pss (pss) |
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Exopolysaccharide production protein Pss (pss) |
| DVUA0038 |
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Gene: Dbac_2222: polysaccharide export protein, PEP-CTERM sytem-associated |
Gene: Dde_0830: polysaccharide export protein, PEP-CTERM sytem-associated |
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Gene: DVUA0038: polysaccharide export protein, PEP-CTERM sytem-associated |
Gene: DvMF_0689: polysaccharide export protein, PEP-CTERM sytem-associated |
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polysaccharide export protein, PEP-CTERM sytem-associated |
| DVUA0039 |
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Gene: Dbac_2221: Lipopolysaccharide biosynthesis chain length determinant protein |
Gene: Dde_0831: Lipopolysaccharide biosynthesis chain length determinant protein |
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Gene: DVUA0039: Lipopolysaccharide biosynthesis chain length determinant protein |
Gene: DvMF_0688: Lipopolysaccharide biosynthesis chain length determinant protein |
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Lipopolysaccharide biosynthesis chain length determinant protein |
| DVUA0040 |
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Gene: Dbac_2220: Protein-tyrosine kinase (EC 2.7.1.112) |
Gene: Dde_0832: Protein-tyrosine kinase (EC 2.7.1.112) |
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Gene: DVUA0040: Protein-tyrosine kinase (EC 2.7.1.112) |
Gene: DvMF_0687: Protein-tyrosine kinase (EC 2.7.1.112) |
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Protein-tyrosine kinase (EC 2.7.1.112) |
| exeA |
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Gene: Dbac_2219: Secretion ATPase, PEP-CTERM locus subfamily |
Gene: Dde_0833: Secretion ATPase, PEP-CTERM locus subfamily |
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Gene: DVUA0041: Secretion ATPase, PEP-CTERM locus subfamily |
Gene: DvMF_0686: Secretion ATPase, PEP-CTERM locus subfamily |
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Secretion ATPase, PEP-CTERM locus subfamily |
| Dde_0818 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -49 score = 4.31745 sequence = AATGGCACAATTCTTTCAT Gene: Dbac_2588: type IV pilus assembly PilZ |
*
Desulfovibrio desulfuricans G20 Site: position = -64 score = 3.94014 sequence = ACTGGCATGAAATTGGCAA Gene: Dde_0818: type IV pilus assembly PilZ |
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*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -74 score = 4.50574 sequence = GATGGCACGGACTTTTCAT Gene: DvMF_3071: type IV pilus assembly PilZ |
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type IV pilus assembly PilZ |
| CRON 7. | |||||||||||
| DVU3004 |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -77 score = 5.1819 sequence = GCTGGCCCGCTTATTGCTT Gene: DVU3004: radical SAM domain protein |
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radical SAM domain protein |
| rfbE |
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Gene: DVU3005: aminotransferase, DegT/DnrJ/EryC1/StrS family |
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aminotransferase, DegT/DnrJ/EryC1/StrS family |
| spsF |
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Gene: DMR_40450: acylneuraminate cytidylyltransferase family protein |
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Gene: DVU3006: acylneuraminate cytidylyltransferase family protein |
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acylneuraminate cytidylyltransferase family protein |
| DVU3007 |
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Gene: DVU3007: hypothetical protein |
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hypothetical protein |
| DVU3008 |
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Gene: DVU3008: N-acetylneuraminate synthase (EC 2.5.1.56) |
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N-acetylneuraminate synthase (EC 2.5.1.56) |
| DVU3009 |
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Gene: DVU3009: radical SAM domain protein |
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radical SAM domain protein |
| lpsC |
Gene: Dret_0280: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) |
Gene: Dbac_0079: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) |
Gene: Dde_1131: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) |
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Gene: DVU3010: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) |
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UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) |
| DVU3011 |
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Gene: DMR_40380: WbqC-like family protein |
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Gene: Desal_3608: WbqC-like family protein |
Gene: DVU3011: WbqC-like family protein |
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WbqC-like family protein |
| rmlB |
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*
Desulfomicrobium baculatum DSM 4028 Site: position = -62 score = 3.72055 sequence = ATTGGGCAGGCGGTTGCTT Gene: Dbac_0370: putative dTDP-glucose 4,6-dehydratase |
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*
Desulfovibrio magneticus RS-1 Site: position = -139 score = 3.82041 sequence = TTAGGATCGATTTTTGCAA Gene: DMR_40340: putative dTDP-glucose 4,6-dehydratase |
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putative dTDP-glucose 4,6-dehydratase |
| Dbac_0369 |
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Gene: Dbac_0369: DegT/DnrJ/EryC1/StrS aminotransferase |
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DegT/DnrJ/EryC1/StrS aminotransferase |
| Dbac_0368 |
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Gene: Dbac_0368: UDP-N-acetylglucosamine 2-epimerase |
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UDP-N-acetylglucosamine 2-epimerase |
| Dbac_0367 |
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Gene: Dbac_0367: N-acetylneuraminate synthase |
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N-acetylneuraminate synthase |
| Dbac_0366 |
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Gene: Dbac_0366: acetyltransferase |
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acetyltransferase |
| DMR_40350 |
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Gene: Dbac_0365: nucleotidyl transferase domain protein |
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Gene: DMR_40350: nucleotidyl transferase domain protein |
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nucleotidyl transferase domain protein |
| DMR_40360 |
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Gene: DMR_40360: DegT/DnrJ/EryC1/StrS aminotransferase family protein |
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DegT/DnrJ/EryC1/StrS aminotransferase family protein |
| DMR_40370 |
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Gene: DMR_40370: hypothetical protein |
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hypothetical protein |
| DMR_40390 |
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Gene: DMR_40390: hypothetical protein |
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hypothetical protein |
| Dbac_0116 |
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*
Desulfomicrobium baculatum DSM 4028 Site: position = -45 score = 4.10908 sequence = ATGGGTACCAATCTTGCTT Gene: Dbac_0116: UDP-N-acetylglucosamine pyrophosphorylase related protein |
*
Desulfovibrio desulfuricans G20 Site: position = -80 score = 4.04517 sequence = CCCGGCACGTGGCATGCAA Site: position = -73 score = 5.05362 sequence = CGTGGCATGCAACTTGCTT Gene: Dde_0438: UDP-N-acetylglucosamine pyrophosphorylase related protein |
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Gene: DMR_p1_00580: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
Gene: Desal_0580: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
Gene: DvMF_1841: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
UDP-N-acetylglucosamine pyrophosphorylase related protein |
| Dde_0439 |
|
|
Gene: Dde_0439: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
Gene: DMR_p1_00590: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
Gene: Desal_0581: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
Gene: DvMF_1840: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
| CRON 8. | |||||||||||
| fliK |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -44 score = 4.78483 sequence = TTTGGCCCGCCTTTTGATC Gene: Dbac_2434: Flagellar hook-length control protein FliK |
*
Desulfovibrio desulfuricans G20 Site: position = -44 score = 4.7794 sequence = TCTGGAACGCCTTTTGTAT Gene: Dde_1713: Flagellar hook-length control protein FliK |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -43 score = 4.61715 sequence = TTTGGAACACTCTTTGTAT Gene: Ddes_1259: Flagellar hook-length control protein FliK |
*
Desulfovibrio magneticus RS-1 Site: position = -43 score = 4.37764 sequence = TTTGGAACGGGTCTTGAAG Gene: DMR_13730: Flagellar hook-length control protein FliK |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -43 score = 4.68785 sequence = TTTGGCACGCCTCGTGAAT Gene: Desal_3007: Flagellar hook-length control protein FliK |
*
Desulfovibrio vulgaris Hildenborough Site: position = -43 score = 4.50168 sequence = ATTGGAACACTCCTTGTAT Gene: DVU1445: Flagellar hook-length control protein FliK |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -44 score = 4.71111 sequence = TTTGGAACGGTCCTTGTAA Gene: DvMF_0248: Flagellar hook-length control protein FliK |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -44 score = 4.463 sequence = TTTGGAACACTCCTTGTAC Gene: LI0568: Flagellar hook-length control protein FliK |
Flagellar hook-length control protein FliK |
| flgD |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -85 score = 3.8104 sequence = TCTGGTCCGGGATGTGCAC Gene: Dbac_2433: Flagellar basal-body rod modification protein FlgD |
*
Desulfovibrio desulfuricans G20 Site: position = -87 score = 3.96255 sequence = TTTGGCCCAGGAAATGCAA Gene: Dde_1712: Flagellar basal-body rod modification protein FlgD |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -98 score = 4.42819 sequence = GTTGGAACAGCCTGTGCAT Gene: Ddes_1260: Flagellar basal-body rod modification protein FlgD |
Gene: DMR_13740: Flagellar basal-body rod modification protein FlgD |
|
*2
Desulfovibrio salexigens DSM 2638 Gene: Desal_0511: Flagellar basal-body rod modification protein FlgD Site: position = -115 score = 4.18225 sequence = TTTGGCCCGGGAAATGCAA Gene: Desal_3006: Flagellar basal-body rod modification protein FlgD |
*
Desulfovibrio vulgaris Hildenborough Site: position = -82 score = 3.87068 sequence = TATGGCGCGGGAAATGCAA Gene: DVU1444: Flagellar basal-body rod modification protein FlgD |
Gene: DvMF_0247: Flagellar basal-body rod modification protein FlgD |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -82 score = 4.41141 sequence = CTTGGCACATAACATGCAT Gene: LI0567: Flagellar basal-body rod modification protein FlgD |
Flagellar basal-body rod modification protein FlgD |
| flgE |
|
Gene: Dbac_2432: Flagellar hook protein FlgE |
Gene: Dde_1711: Flagellar hook protein FlgE |
Gene: Ddes_1261: Flagellar hook protein FlgE |
*2
Desulfovibrio magneticus RS-1 Site: position = -180 score = 4.17324 sequence = ATTGGCCCAGCATGTGCAA Gene: DMR_16470: Flagellar hook protein FlgE Gene: DMR_13750: Flagellar hook protein FlgE |
|
2
Desulfovibrio salexigens DSM 2638 Gene: Desal_0512: Flagellar hook protein FlgE Gene: Desal_3005: Flagellar hook protein FlgE |
Gene: DVU1443: Flagellar hook protein FlgE |
Gene: DvMF_0246: Flagellar hook protein FlgE |
Gene: LI0566: Flagellar hook protein FlgE |
Flagellar hook protein FlgE |
| CRON 9. | |||||||||||
| DVU3342 |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -113 score = 3.7634 sequence = AATGGAGCATTAATTGCTA Gene: DVU3342: hypothetical protein |
|
|
hypothetical protein |
| DVU3343 |
|
|
|
|
|
|
|
Gene: DVU3343: hypothetical protein |
|
|
hypothetical protein |
| DVU3344 |
|
|
|
|
Gene: DMR_14150: hypothetical protein |
|
|
Gene: DVU3344: hypothetical protein |
|
|
hypothetical protein |
| CRON 10. | |||||||||||
| Dde_0645 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -48 score = 4.43667 sequence = TTTGGCACCGGTGTTGTAA Gene: Dde_0645: hypothetical protein |
|
|
|
|
|
|
|
hypothetical protein |
| CRON 11. | |||||||||||
| Dde_0816 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -98 score = 4.11029 sequence = CACGGCATCATGATTGCAT Gene: Dde_0816: FOG: GGDEF domain |
|
|
|
|
|
|
|
FOG: GGDEF domain |
| CRON 12. | |||||||||||
| Dde_0439 |
|
|
Gene: Dde_0439: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
Gene: DMR_p1_00590: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -97 score = 4.27958 sequence = TTTGGCACCCAAATTGAAT Gene: Desal_0581: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -253 score = 4.43457 sequence = GCTTGCACACTACTTGCAT Gene: DvMF_1840: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
|
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) |
| Dde_0438 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -45 score = 4.10908 sequence = ATGGGTACCAATCTTGCTT Gene: Dbac_0116: UDP-N-acetylglucosamine pyrophosphorylase related protein |
*
Desulfovibrio desulfuricans G20 Site: position = -73 score = 5.05362 sequence = CGTGGCATGCAACTTGCTT Gene: Dde_0438: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
Gene: DMR_p1_00580: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
Gene: Desal_0580: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
Gene: DvMF_1841: UDP-N-acetylglucosamine pyrophosphorylase related protein |
|
UDP-N-acetylglucosamine pyrophosphorylase related protein |
| Desal_0579 |
|
|
|
|
|
|
Gene: Desal_0579: acylneuraminate cytidylyltransferase |
|
|
|
acylneuraminate cytidylyltransferase |
| Desal_0578 |
|
|
|
|
|
|
Gene: Desal_0578: acylneuraminate cytidylyltransferase |
|
|
|
acylneuraminate cytidylyltransferase |
| CRON 13. | |||||||||||
| Dde_0357 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -141 score = 5.21109 sequence = GGTGGCACGGTTCCTGCTT Gene: Dde_0357: Tetratricopeptide TPR_1 repeat-containing protein |
|
|
|
|
|
|
|
Tetratricopeptide TPR_1 repeat-containing protein |
| CRON 14. | |||||||||||
| Dde_0191 |
|
Gene: Dbac_0914: protein of unknown function DUF355 |
*
Desulfovibrio desulfuricans G20 Site: position = -227 score = 5.06624 sequence = GTTGGCACGGCAGTTGCTA Gene: Dde_0191: protein of unknown function DUF355 |
|
|
|
|
|
|
|
protein of unknown function DUF355 |
| CRON 15. | |||||||||||
| nudF |
Gene: Dret_0812: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
Gene: Dbac_0105: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
*
Desulfovibrio desulfuricans G20 Site: position = -243 score = 4.85051 sequence = AATGGCACGCTTGATGCTA Gene: Dde_2287: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -76 score = 4.09256 sequence = TGCGGCCCGGCGCGTGCTG Gene: Ddes_0750: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
Gene: DMR_22880: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
*
Desulfovibrio piger ATCC 29098 Site: position = 8 score = 3.61291 sequence = TGCGGCCGGCATGCTGCTG Gene: DESPIG_01518: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
*
Desulfovibrio salexigens DSM 2638 Site: position = -380 score = 5.0498 sequence = TTTGGCATACCCATTGCTA Gene: Desal_2793: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
Gene: DVU2245: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
Gene: DvMF_0842: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
Gene: LI0940: ADP-ribose pyrophosphatase (EC 3.6.1.13) |
ADP-ribose pyrophosphatase (EC 3.6.1.13) |
| glgA |
Gene: Dret_0814: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: Dbac_0106: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: Dde_2286: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: DMR_22870: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: Desal_2792: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: DVU2244: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: DvMF_0841: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
| glgB |
|
|
Gene: Dde_2285: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
Gene: DMR_22860: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
Gene: Desal_2791: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: DVU2243: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
Gene: DvMF_0840: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
| Ddes_0751 |
Gene: Dret_0260: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: Dbac_3015: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: Dde_1323: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: Ddes_0751: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
|
Gene: DESPIG_01519: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: Desal_2281: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: DVU2320: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
Gene: DvMF_3173: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
|
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
| nadE |
Gene: Dret_0426: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
|
Gene: Dde_2091: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: Ddes_0752: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: DMR_31100: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: DESPIG_01520: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: Desal_2869: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: DVU1610: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: DvMF_0449: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
Gene: LI0244: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase |
| CRON 16. | |||||||||||
| DVU2277 |
|
|
|
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -57 score = 4.14388 sequence = AAAGGCACTCCCTTTGCAG Gene: Desal_3525: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -90 score = 4.21662 sequence = GCAGGCATGACCCTTGCCG Gene: DVU2277: hypothetical protein |
|
|
hypothetical protein |
| DVU2276 |
|
|
|
|
|
2
Desulfovibrio piger ATCC 29098 Gene: DESPIG_02590: membrane protein of unknown function DUF81 Gene: DESPIG_02147: membrane protein of unknown function DUF81 |
Gene: Desal_3526: membrane protein of unknown function DUF81 |
Gene: DVU2276: membrane protein of unknown function DUF81 |
|
|
membrane protein of unknown function DUF81 |
| CRON 17. | |||||||||||
| nifH |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -81 score = 5.08658 sequence = TTTGGCACGCCCGTTGCCC Gene: Dbac_0834: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -60 score = 5.01431 sequence = ACTGGCATGACTCTTGCCT Gene: DMR_20560: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -69 score = 5.09273 sequence = TTTGGCACACCACTTGCCT Gene: Desal_0447: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Desulfovibrio vulgaris Hildenborough Site: position = -326 score = 4.70353 sequence = CATGGCACATCCCTTGCCC Gene: DVUA0015: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -110 score = 4.76905 sequence = ACTGGCACGGGGTTTGCCC Gene: DvMF_2613: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
|
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
| glnB-3 |
|
Gene: Dbac_0835: Nitrogen regulatory protein P-II |
|
|
Gene: DMR_20550: Nitrogen regulatory protein P-II |
|
Gene: Desal_0446: Nitrogen regulatory protein P-II |
Gene: DVUA0014: Nitrogen regulatory protein P-II |
Gene: DvMF_2614: Nitrogen regulatory protein P-II |
|
Nitrogen regulatory protein P-II |
| glnB-2 |
|
Gene: Dbac_0836: Nitrogen regulatory protein P-II |
|
|
Gene: DMR_20540: Nitrogen regulatory protein P-II |
|
Gene: Desal_0445: Nitrogen regulatory protein P-II |
Gene: DVUA0013: Nitrogen regulatory protein P-II |
Gene: DvMF_2615: Nitrogen regulatory protein P-II |
|
Nitrogen regulatory protein P-II |
| nifD |
|
Gene: Dbac_0837: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
|
Gene: DMR_20530: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
Gene: Desal_0444: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: DVUA0012: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: DvMF_2616: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
| nifK |
|
Gene: Dbac_0838: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
|
|
Gene: DMR_20520: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
|
Gene: Desal_0443: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: DVUA0011: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: DvMF_2617: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
|
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
| DvMF_2618 |
|
Gene: Dbac_0839: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
|
|
Gene: Desal_0442: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
Gene: DvMF_2618: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
| DVUA0010 |
|
Gene: Dbac_0840: Ferredoxin, 2Fe-2S |
|
|
Gene: DMR_20510: Ferredoxin, 2Fe-2S |
|
Gene: Desal_0441: Ferredoxin, 2Fe-2S |
Gene: DVUA0010: Ferredoxin, 2Fe-2S |
Gene: DvMF_2619: Ferredoxin, 2Fe-2S |
|
Ferredoxin, 2Fe-2S |
| Desal_0440 |
|
|
|
|
|
|
Gene: Desal_0440: GCN5-related N-acetyltransferase |
|
|
|
GCN5-related N-acetyltransferase |
| nifE |
|
Gene: Dbac_0841: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -62 score = 4.93293 sequence = TCTGGCACGCTCCTTGTAG Gene: DMR_17520: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
|
Gene: Desal_0439: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
Gene: DVUA0009: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
Gene: DvMF_2620: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
|
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
| nifN |
|
Gene: Dbac_0842: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
|
|
Gene: DMR_17510: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
|
Gene: Desal_0438: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
Gene: DVUA0008: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
Gene: DvMF_2621: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
|
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
| nifB |
|
Gene: Dbac_0843: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
Gene: DMR_17500: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
Gene: Desal_0437: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
Gene: DVUA0007: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
Gene: DvMF_2622: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
| CRON 18. | |||||||||||
| adh |
*
Desulfohalobium retbaense DSM 5692 Site: position = -95 score = 4.94594 sequence = TTTGGCCCGATATTTGCTC Gene: Dret_0199: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -88 score = 4.65551 sequence = TCTGGCCTCATTCTTGCCT Gene: Dbac_3326: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
*
Desulfovibrio desulfuricans G20 Site: position = -98 score = 5.08644 sequence = TTTGGCCCGTTCCTTGCCT Gene: Dde_3523: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -92 score = 5.03506 sequence = TTTGGCACACGTCTTGCCC Gene: Desal_0284: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -99 score = 5.08213 sequence = TTTGGCCCCTTCCTTGCTT Gene: DVU2405: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -98 score = 5.24618 sequence = TTTGGCCCCGTCCTTGCTT Gene: DvMF_0321: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
|
alcohol dehydrogenase, iron-containing( EC:1.1.1.1 ) |
| hdrC |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2317: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) Gene: Dret_0198: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -149 score = 4.38833 sequence = TATGGCACTAAATCTGCTT Gene: Dbac_0848: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3524: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) Gene: Dde_1207: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: Ddes_2098: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: DMR_01900: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: DESPIG_02729: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: Desal_0602: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: DVU2404: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
Gene: DvMF_0322: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
|
CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) |
| hdrB |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2316: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) Gene: Dret_0197: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: Dbac_0849: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3525: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) Gene: Dde_1208: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: Ddes_2099: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: DMR_01910: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: DESPIG_02730: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: Desal_0601: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: DVU2403: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
Gene: DvMF_0323: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
|
CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) |
| hdrA |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2315: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) Gene: Dret_0196: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: Dbac_0850: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3526: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) Gene: Dde_1209: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: Ddes_2100: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: DMR_01920: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: DESPIG_02731: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: Desal_0600: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: DVU2402: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
Gene: DvMF_0324: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
|
CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) |
| hdrD |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2314: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) Gene: Dret_0195: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
Gene: Dbac_0851: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_1210: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) Gene: Dde_3527: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
|
Gene: DMR_01930: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
|
Gene: Desal_0599: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
|
|
|
CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) |
| DVU2401 |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2313: Coenzyme F420-reducing hydrogenase, beta subunit Gene: Dret_0194: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: Dbac_0852: Coenzyme F420-reducing hydrogenase, beta subunit |
2
Desulfovibrio desulfuricans G20 Gene: Dde_1211: Coenzyme F420-reducing hydrogenase, beta subunit Gene: Dde_3528: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: Ddes_2101: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: DMR_01940: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: DESPIG_02732: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: Desal_0598: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: DVU2401: Coenzyme F420-reducing hydrogenase, beta subunit |
Gene: DvMF_0325: Coenzyme F420-reducing hydrogenase, beta subunit |
|
Coenzyme F420-reducing hydrogenase, beta subunit |
| DVU2400 |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2312: heterodisulfide reductase, iron-sulfur binding subunit, putative Gene: Dret_0193: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: Dbac_0853: heterodisulfide reductase, iron-sulfur binding subunit, putative |
2
Desulfovibrio desulfuricans G20 Gene: Dde_1212: heterodisulfide reductase, iron-sulfur binding subunit, putative Gene: Dde_3529: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: Ddes_2102: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: DMR_01950: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: DESPIG_02733: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: Desal_0597: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: DVU2400: heterodisulfide reductase, iron-sulfur binding subunit, putative |
Gene: DvMF_0326: heterodisulfide reductase, iron-sulfur binding subunit, putative |
|
heterodisulfide reductase, iron-sulfur binding subunit, putative |
| DVU2399 |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2311: Heterodisulfide reductase, cytochrome reductase subunit Gene: Dret_0192: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: Dbac_0854: Heterodisulfide reductase, cytochrome reductase subunit |
2
Desulfovibrio desulfuricans G20 Gene: Dde_1213: Heterodisulfide reductase, cytochrome reductase subunit Gene: Dde_3530: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: Ddes_2103: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: DMR_01960: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: DESPIG_02734: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: Desal_0596: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: DVU2399: Heterodisulfide reductase, cytochrome reductase subunit |
Gene: DvMF_0327: Heterodisulfide reductase, cytochrome reductase subunit |
|
Heterodisulfide reductase, cytochrome reductase subunit |
| DVU2398 |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_2310: Rubrerythrin Gene: Dret_0191: Rubrerythrin |
Gene: Dbac_0855: Rubrerythrin |
Gene: Dde_1214: Rubrerythrin |
|
Gene: DMR_01970: Rubrerythrin |
|
Gene: Desal_2939: Rubrerythrin |
Gene: DVU2398: Rubrerythrin |
Gene: DvMF_0328: Rubrerythrin |
|
Rubrerythrin |
| Dbac_2155 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -282 score = 5.32318 sequence = TTTGGAATGCTCCTTGCTT Gene: Dbac_2155: Hydrolase, UxaA family |
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -198 score = 5.28773 sequence = TTTGGCACGCACATTGCTC Gene: Ddes_2374: Hydrolase, UxaA family |
|
|
|
|
2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2006: Hydrolase, UxaA family Gene: DvMF_2004: Hydrolase, UxaA family |
|
Hydrolase, UxaA family |
| Dbac_2156 |
|
Gene: Dbac_2156: Altronate dehydratase |
|
Gene: Ddes_2375: Altronate dehydratase |
|
|
|
|
2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2005: Altronate dehydratase Gene: DvMF_2003: Altronate dehydratase |
|
Altronate dehydratase |
| Dbac_2146 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -113 score = 5.15552 sequence = CTTGGAACGCTCTTTGCTC Gene: Dbac_2146: 6-phosphogluconate dehydrogenase NAD-binding |
|
|
|
|
|
|
|
|
6-phosphogluconate dehydrogenase NAD-binding |
| CRON 19. | |||||||||||
| DVU0410 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -67 score = 4.42032 sequence = GCTGGCATGAATGTTGATT Gene: Dbac_0691: hypothetical protein |
*
Desulfovibrio desulfuricans G20 Site: position = -83 score = 4.45349 sequence = ACCGGCACGGATACTGCAT Gene: Dde_0564: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -75 score = 4.92963 sequence = AATGGCATACAGTTTGCTT Gene: Ddes_0313: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = -78 score = 4.90631 sequence = TTTGGCACGGTTGTTGTAA Gene: DMR_25590: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -81 score = 4.77562 sequence = GTTGGCATGACTCTTGTAT Gene: Desal_2827: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -70 score = 5.05248 sequence = GTTGGCCCGGAATTTGCTT Gene: DVU0410: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -75 score = 4.77029 sequence = CATGGTCCGTTTCTTGCTT Gene: DvMF_1546: hypothetical protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -60 score = 4.41644 sequence = AATGGCTCACCTCTTGCAA Gene: LI1017: hypothetical protein |
hypothetical protein |
| DVU0409 |
|
Gene: Dbac_0692: hypothetical protein |
Gene: Dde_0563: hypothetical protein |
Gene: Ddes_0314: hypothetical protein |
Gene: DMR_25580: hypothetical protein |
|
Gene: Desal_2826: hypothetical protein |
Gene: DVU0409: hypothetical protein |
Gene: DvMF_1545: hypothetical protein |
Gene: LI1016: hypothetical protein |
hypothetical protein |
| DVU3387 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -70 score = 4.35556 sequence = GCTGGCCCGAAATCTGCTA Gene: Dbac_1772: hypothetical protein |
*2
Desulfovibrio desulfuricans G20 Gene: Dde_2567: hypothetical protein Site: position = -57 score = 4.1505 sequence = ATCGGCACTATGGTTGCTA Gene: Dde_0108: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -61 score = 4.81935 sequence = CTTGGCACTGTACTTGCTG Gene: Ddes_0311: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = -13 score = 4.07467 sequence = GTCGGCACAAGGGTTGCAA Gene: DMR_05460: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -59 score = 4.30096 sequence = GTTGGTACGTTTGCTGCAA Gene: Desal_2614: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -92 score = 4.08489 sequence = GCAGGTGCGGTTCTTGCTA Gene: DVU3387: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -67 score = 4.9644 sequence = GCTGGCATTCCCCTTGCTT Gene: DvMF_2067: hypothetical protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -62 score = 3.86231 sequence = TAAGGCCTAAAATTTGCAT Gene: LI0507: hypothetical protein |
hypothetical protein |
| CRON 20. | |||||||||||
| DVU1152 |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -258 score = 3.94474 sequence = GGCGGTATGCAACTTGCAA Gene: DVU1152: PEP-CTERM motif protein |
|
|
PEP-CTERM motif protein |
| CRON 21. | |||||||||||
| glnN |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -89 score = 4.37747 sequence = TGTGGCATCTGAATTGCTT Gene: Dbac_1496: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
*
Desulfovibrio desulfuricans G20 Site: position = -96 score = 4.65731 sequence = GTTGGCACCGACTCTGCAA Gene: Dde_0102: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
Gene: Ddes_1593: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
Gene: DMR_10730: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
Gene: DESPIG_00805: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
*
Desulfovibrio salexigens DSM 2638 Site: position = -102 score = 5.04994 sequence = TACGGCACGCCTCCTGCTT Gene: Desal_2290: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -100 score = 5.19781 sequence = ATTGGCCCGCTCTTTGCTC Gene: DVU1258: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -201 score = 4.90467 sequence = AGTGGACCGCTTCTTGCTT Gene: DvMF_1590: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
|
Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
| CRON 22. | |||||||||||
| DVU0318 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -73 score = 4.19485 sequence = GGTGGCATCAAAGTTGCTA Gene: Dbac_3025: TPR repeat-containing protein |
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -138 score = 4.80941 sequence = CTTGGCATGAGGATTGCTT Gene: DMR_45010: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -100 score = 4.85394 sequence = TTTGGCACGGGGTGTGCAT Gene: Desal_1157: TPR repeat-containing protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -115 score = 4.86 sequence = TTGGGCATGGCGCTTGCTT Gene: DVU0318: TPR repeat-containing protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -211 score = 4.62 sequence = CGTGGCACATGGTTTGCTA Site: position = -158 score = 4.72866 sequence = AATGGCACGCATAGTGCTA Gene: DvMF_2283: TPR repeat-containing protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -80 score = 5.05821 sequence = TTTGGCATGTGCATTGCTT Gene: LI0700: TPR repeat-containing protein |
TPR repeat-containing protein |
| CRON 23. | |||||||||||
| DVU1032 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -47 score = 5.02211 sequence = CTTGGCAGGGACTTTGCTT Gene: Dbac_2476: hypothetical protein |
*
Desulfovibrio desulfuricans G20 Site: position = -54 score = 4.66862 sequence = GTTGGCAGACTTATTGCTA Gene: Dde_1455: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -59 score = 4.62391 sequence = CTTGGCAGCATTTTTGCAT Gene: Ddes_0763: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = -52 score = 5.0787 sequence = TCTGGCAGGTTTTTTGCTT Gene: DMR_39260: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -54 score = 4.95714 sequence = TTTGGCAAGGTCATTGCAT Gene: Desal_0181: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -52 score = 4.75281 sequence = GGTGGCGTGCTTCTTGCTC Gene: DVU1032: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -38 score = 5.13766 sequence = CATGGCAGGGTTCTTGCTT Gene: DvMF_0905: hypothetical protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -53 score = 5.31205 sequence = CTTGGCAAGCTTTTTGCTT Gene: LI0887: hypothetical protein |
hypothetical protein |
| CRON 24. | |||||||||||
| nifV |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -57 score = 4.23434 sequence = CGTGGCATCGACCATGCAA Gene: Dbac_0833: Pyruvate carboxyltransferase |
|
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -58 score = 4.48176 sequence = TTTGGCATCAATAATGCTT Gene: Desal_0448: Pyruvate carboxyltransferase |
*
Desulfovibrio vulgaris Hildenborough Site: position = 26 score = 4.32241 sequence = CTTGGCATCGGGTCTGCAA Gene: DVUA0016: Pyruvate carboxyltransferase |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -117 score = 4.23725 sequence = GTTGGCATCGGCGATGCAT Gene: DvMF_2612: Pyruvate carboxyltransferase |
|
Pyruvate carboxyltransferase |
| Dbac_0547 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -44 score = 4.83776 sequence = TCTGGCATGGGATCTGCTT Gene: Dbac_0547: hypothetical protein |
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -29 score = 4.86049 sequence = TCTGGACCGGTATTTGCTT Gene: DMR_11080: hypothetical protein |
|
Gene: Desal_0449: hypothetical protein |
|
Gene: DvMF_2323: hypothetical protein |
|
hypothetical protein |
| CRON 25. | |||||||||||
| DESPIG_02585 |
|
|
|
|
|
*
Desulfovibrio piger ATCC 29098 Site: position = -57 score = 5.29178 sequence = ATTGGCACGGACTTTGCTG Gene: DESPIG_02585: hypothetical protein |
|
|
|
|
hypothetical protein |
| DESPIG_02584 |
|
|
|
|
|
Gene: DESPIG_02584: Altronate dehydratase |
|
|
|
|
Altronate dehydratase |
| CRON 26. | |||||||||||
| dctA |
|
|
|
|
*2
Desulfovibrio magneticus RS-1 Site: position = -179 score = 5.16969 sequence = ATTGGCACACTCTTTGCCT Gene: DMR_34260: C4-dicarboxylic acid transport protein Gene: DMR_05750: C4-dicarboxylic acid transport protein |
|
|
|
|
|
C4-dicarboxylic acid transport protein |
| frdC |
Gene: Dret_1065: Fumarate reductase cytochrome b subunit |
Gene: Dbac_3066: Fumarate reductase cytochrome b subunit |
*
Desulfovibrio desulfuricans G20 Site: position = -159 score = 4.86688 sequence = ACTGGCACGGCATATGCTT Gene: Dde_1258: Fumarate reductase cytochrome b subunit |
Gene: Ddes_1530: Fumarate reductase cytochrome b subunit |
2
Desulfovibrio magneticus RS-1 Gene: DMR_05760: Fumarate reductase cytochrome b subunit Gene: DMR_34270: Fumarate reductase cytochrome b subunit |
|
Gene: Desal_0720: Fumarate reductase cytochrome b subunit |
Gene: DVU3261: Fumarate reductase cytochrome b subunit |
Gene: DvMF_2458: Fumarate reductase cytochrome b subunit |
|
Fumarate reductase cytochrome b subunit |
| frdA |
Gene: Dret_1066: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Gene: Dbac_3065: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Gene: Dde_1257: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Gene: Ddes_1531: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
2
Desulfovibrio magneticus RS-1 Gene: DMR_05770: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) Gene: DMR_34280: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
|
Gene: Desal_0721: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Gene: DVU3262: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Gene: DvMF_2459: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
|
Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
| frdB |
Gene: Dret_1067: Fumarate reductase iron-sulfur subunit |
Gene: Dbac_3064: Fumarate reductase iron-sulfur subunit |
Gene: Dde_1256: Fumarate reductase iron-sulfur subunit |
Gene: Ddes_1532: Fumarate reductase iron-sulfur subunit |
2
Desulfovibrio magneticus RS-1 Gene: DMR_05780: Fumarate reductase iron-sulfur subunit Gene: DMR_34290: Fumarate reductase iron-sulfur subunit |
|
Gene: Desal_0722: Fumarate reductase iron-sulfur subunit |
Gene: DVU3263: Fumarate reductase iron-sulfur subunit |
Gene: DvMF_2460: Fumarate reductase iron-sulfur subunit |
|
Fumarate reductase iron-sulfur subunit |
| fumA |
Gene: Dret_1068: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Gene: Dbac_3063: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3639: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A Gene: Dde_1255: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Gene: Ddes_1528: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
2
Desulfovibrio magneticus RS-1 Gene: DMR_34300: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A Gene: DMR_05730: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Gene: DESPIG_03121: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Gene: Desal_0723: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Gene: DVU3264: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
|
Gene: LI0294: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit A |
| ttdB |
Gene: Dret_1069: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: Dbac_3062: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3638: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B Gene: Dde_1254: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: Ddes_1529: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
2
Desulfovibrio magneticus RS-1 Gene: DMR_34310: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B Gene: DMR_05740: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: DESPIG_03120: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: Desal_0724: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: DVU3265: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: DvMF_2462: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Gene: LI0293: Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
Fumarate hydratase class I, aerobic (EC 4.2.1.2) ## subunit B |
| DMR_34320 |
|
|
|
|
Gene: DMR_34320: oxidoreductase FAD/NAD(P)-binding domain protein |
|
|
|
|
|
oxidoreductase FAD/NAD(P)-binding domain protein |
| gltD |
|
|
|
|
Gene: DMR_34330: glutamate synthase small subunit |
|
|
|
|
|
glutamate synthase small subunit |
| sfcA |
Gene: Dret_0778: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: Dbac_3061: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3637: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) Gene: Dde_1253: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
|
Gene: DMR_34340: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: DESPIG_02004: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: Desal_0725: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: DVU0414: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: DvMF_1539: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Gene: LI0351: Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
| dcu |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -209 score = 4.75283 sequence = CCTGGCATCGTCCCTGCTA Gene: DMR_05720: anaerobic C4-dicarboxylate transporter |
|
|
|
|
|
anaerobic C4-dicarboxylate transporter |
| CRON 27. | |||||||||||
| DVU0542 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -52 score = 4.89565 sequence = TTTGGCCCCGCCTTTGCAA Gene: DMR_33160: putative universal stress protein |
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -71 score = 5.10983 sequence = CGTGGCATGCAGCTTGCTT Gene: DVU0542: putative universal stress protein |
|
|
putative universal stress protein |
| DVU0543 |
|
|
|
Gene: Ddes_0930: membrane protein, putative |
Gene: DMR_33150: membrane protein, putative |
|
|
Gene: DVU0543: membrane protein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -272 score = 4.67097 sequence = GTTGGTCCGCGTCTTGCTC Gene: DvMF_2603: membrane protein, putative |
|
membrane protein, putative |
| DVU0544 |
|
|
|
Gene: Ddes_0931: hypothetical protein |
Gene: DMR_33140: hypothetical protein |
|
|
Gene: DVU0544: hypothetical protein |
Gene: DvMF_2604: hypothetical protein |
|
hypothetical protein |
| DVU0545 |
|
|
|
Gene: Ddes_0932: UspA domain protein |
Gene: DMR_33130: UspA domain protein |
|
|
Gene: DVU0545: UspA domain protein |
Gene: DvMF_2605: UspA domain protein |
|
UspA domain protein |
| CRON 28. | |||||||||||
| fliD |
Gene: Dret_0633: Flagellar hook-associated protein FliD |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -64 score = 4.73621 sequence = TCTGGCACCAGGTTTGCTC Gene: Dbac_2386: Flagellar hook-associated protein FliD |
*
Desulfovibrio desulfuricans G20 Site: position = -70 score = 4.67016 sequence = CATGGCATTTTCCTTGCAT Gene: Dde_1120: Flagellar hook-associated protein FliD |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -82 score = 4.49321 sequence = AGTTGCACGCATTTTGCAA Gene: Ddes_0530: Flagellar hook-associated protein FliD |
*
Desulfovibrio magneticus RS-1 Site: position = -71 score = 4.90942 sequence = GTTGGCATCCGCCTTGCTC Gene: DMR_03980: Flagellar hook-associated protein FliD |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 4.88785 sequence = TTTGGCATCCTGATTGCAT Gene: Desal_1249: Flagellar hook-associated protein FliD |
*
Desulfovibrio vulgaris Hildenborough Site: position = -71 score = 4.18422 sequence = CGTGGCATCTGGATTGCAT Gene: DVU0863: Flagellar hook-associated protein FliD |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -73 score = 4.72031 sequence = TCTGGCACCAGCCTTGCAG Gene: DvMF_2912: Flagellar hook-associated protein FliD |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -61 score = 4.73125 sequence = TTTGGCACTTTATTTGCTG Gene: LI0211: Flagellar hook-associated protein FliD |
Flagellar hook-associated protein FliD |
| fliS |
Gene: Dret_0634: Flagellin-specific chaperone FliS |
Gene: Dbac_2387: Flagellin-specific chaperone FliS |
Gene: Dde_1119: Flagellin-specific chaperone FliS |
Gene: Ddes_0529: Flagellin-specific chaperone FliS |
Gene: DMR_03970: Flagellin-specific chaperone FliS |
|
Gene: Desal_1248: Flagellin-specific chaperone FliS |
Gene: DVU0862: Flagellin-specific chaperone FliS |
Gene: DvMF_2911: Flagellin-specific chaperone FliS |
Gene: LI0210: Flagellin-specific chaperone FliS |
Flagellin-specific chaperone FliS |
| DVU0858 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -46 score = 4.61512 sequence = CTTGGTATCTATCTTGCTT Gene: Dbac_0245: lipoprotein, putative |
*
Desulfovibrio desulfuricans G20 Site: position = -132 score = 4.18539 sequence = CATGGCCCTTCTTTTGCCG Site: position = -65 score = 4.29603 sequence = CACGGCACTCAATTTGCAT Gene: Dde_2573: lipoprotein, putative |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -177 score = 4.85096 sequence = TTTGGCACGTTTCTGGCAT Site: position = -148 score = 4.28548 sequence = AATGGCACACACTGTGCCG Site: position = -54 score = 4.00645 sequence = GTTGGCAAGGTGAATGCCA Gene: Ddes_0596: lipoprotein, putative |
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -38 score = 4.64722 sequence = TACGGCACAAATATTGCTT Gene: Desal_1243: lipoprotein, putative |
*
Desulfovibrio vulgaris Hildenborough Site: position = -79 score = 5.00891 sequence = TCCGGCATCGTTCTTGCTT Gene: DVU0858: lipoprotein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -127 score = 4.73615 sequence = TACGGCACCATTCTTGCTG Gene: DvMF_2906: lipoprotein, putative |
Gene: LI0341: lipoprotein, putative |
lipoprotein, putative |
| CRON 29. | |||||||||||
| flaB3 |
|
|
*2
Desulfovibrio desulfuricans G20 Site: position = -136 score = 5.15745 sequence = TCTGGCACGATTTATGCTT Gene: Dde_1501: Flagellin protein FlaA Gene: Dde_1502: Flagellin protein FlaA |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -243 score = 4.76633 sequence = AATGGCATGATTCCTGCTG Gene: Ddes_2282: Flagellin protein FlaA |
|
|
|
Gene: DVU2444: Flagellin protein FlaA |
Gene: DvMF_2950: Flagellin protein FlaA |
|
Flagellin protein FlaA |
| CRON 30. | |||||||||||
| DVU2107 |
*
Desulfohalobium retbaense DSM 5692 Site: position = -67 score = 4.80504 sequence = ATCGGCACGGACATTGCTA Gene: Dret_0446: hypothetical protein |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -43 score = 4.67501 sequence = GGCGGCACGGCTCATGCTT Gene: Dbac_2301: hypothetical protein |
*
Desulfovibrio desulfuricans G20 Site: position = -49 score = 4.19433 sequence = GTCGGCATCATTCCTGCCT Gene: Dde_3197: hypothetical protein |
|
*
Desulfovibrio magneticus RS-1 Site: position = -42 score = 4.90929 sequence = TTCGGCACGGTTCCTGCCT Gene: DMR_11290: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -30 score = 4.73253 sequence = CATGGCACGGACTATGCCT Gene: Desal_0622: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -51 score = 4.38005 sequence = CACGGCATCATTCCTGCTT Gene: DVU2107: hypothetical protein |
|
|
hypothetical protein |
| mrp |
|
Gene: Dbac_2300: Cytosolic Fe-S cluster assembling factor NBP35 |
2
Desulfovibrio desulfuricans G20 Gene: Dde_3202: Cytosolic Fe-S cluster assembling factor NBP35 Gene: Dde_1306: Cytosolic Fe-S cluster assembling factor NBP35 |
|
Gene: DMR_11280: Cytosolic Fe-S cluster assembling factor NBP35 |
|
Gene: Desal_0620: Cytosolic Fe-S cluster assembling factor NBP35 |
2
Desulfovibrio vulgaris Hildenborough Gene: DVU2330: Cytosolic Fe-S cluster assembling factor NBP35 Gene: DVU2109: Cytosolic Fe-S cluster assembling factor NBP35 |
Gene: DvMF_3164: Cytosolic Fe-S cluster assembling factor NBP35 |
|
Cytosolic Fe-S cluster assembling factor NBP35 |
| Dbac_0447 |
|
Gene: Dbac_0447: nitrogen-fixing NifU-like N-terminal domain protein |
|
|
Gene: DMR_11270: nitrogen-fixing NifU-like N-terminal domain protein |
|
|
|
|
|
nitrogen-fixing NifU-like N-terminal domain protein |
| DVU2108 |
Gene: Dret_0445: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
|
Gene: Dde_3198: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -118 score = 3.77372 sequence = GCAGGGACGCTTTTTGTAT Gene: Ddes_1867: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: DMR_11260: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: DESPIG_00382: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: Desal_0621: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: DVU2108: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
|
|
Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
| DVU2104 |
Gene: Dret_0442: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Dbac_2277: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Dde_3200: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Ddes_1866: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DMR_11250: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DESPIG_00383: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Desal_2514: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DVU2104: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|
|
4Fe-4S ferredoxin iron-sulfur binding domain protein |
| DVU2103 |
Gene: Dret_0441: Iron-sulfur cluster binding protein |
Gene: Dbac_2276: Iron-sulfur cluster binding protein |
Gene: Dde_3201: Iron-sulfur cluster binding protein |
Gene: Ddes_1865: Iron-sulfur cluster binding protein |
Gene: DMR_11240: Iron-sulfur cluster binding protein |
Gene: DESPIG_00384: Iron-sulfur cluster binding protein |
Gene: Desal_2515: Iron-sulfur cluster binding protein |
Gene: DVU2103: Iron-sulfur cluster binding protein |
|
|
Iron-sulfur cluster binding protein |
| Ddes_1864 |
|
Gene: Dbac_2275: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
|
2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_1864: Dinitrogenase iron-molybdenum cofactor biosynthesis protein Gene: Ddes_1863: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: DMR_11230: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Gene: DESPIG_00385: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
|
|
|
Gene: LI0481: Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
Dinitrogenase iron-molybdenum cofactor biosynthesis protein |
| Dde_3199 |
|
|
Gene: Dde_3199: hypothetical protein |
|
|
|
|
|
|
|
hypothetical protein |
| Desal_2513 |
|
|
|
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -57 score = 4.84486 sequence = CAAGGCACGGCTGTTGCTT Gene: Desal_2513: hypothetical protein |
|
|
|
hypothetical protein |
| Dbac_1530 |
|
*2
Desulfomicrobium baculatum DSM 4028 Site: position = -96 score = 5.04278 sequence = CATGGCACCGCATTTGCTT Gene: Dbac_0448: Protein of unknown function CGGC region Gene: Dbac_1530: Protein of unknown function CGGC region |
|
|
|
|
Gene: Desal_2516: Protein of unknown function CGGC region |
|
|
|
Protein of unknown function CGGC region |
| DVU2105 |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -60 score = 4.36732 sequence = CGTGGAACGGAACGTGCTT Gene: DVU2105: Major ampullate spidroin |
|
|
Major ampullate spidroin |
| Dret_0444 |
Gene: Dret_0444: putative cytoplasmic protein |
|
|
|
|
|
|
|
|
|
putative cytoplasmic protein |
| DVU3020 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -95 score = 4.40875 sequence = AATGGCAGAACCTTTGCAT Gene: Dde_3230: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -76 score = 4.94409 sequence = TTTGGCAAGACCTTTGCAT Gene: Ddes_0695: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = -89 score = 5.04887 sequence = CTTGGCAGGCTCTTTGCTA Gene: DMR_25570: hypothetical protein |
|
Gene: Desal_2871: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -56 score = 5.08793 sequence = CATGGCATGTGCCTTGCTT Gene: DVU3020: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -71 score = 4.74318 sequence = CTCGGCAAGGCTCTTGCAT Gene: DvMF_1856: hypothetical protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -57 score = 4.37876 sequence = TTAGGCATAGTTTTTGATT Gene: LI0277: hypothetical protein |
hypothetical protein |
| DMR_25560 |
|
|
|
|
Gene: DMR_25560: hypothetical protein |
|
|
|
|
|
hypothetical protein |
| CRON 31. | |||||||||||
| amt |
*
Desulfohalobium retbaense DSM 5692 Site: position = -53 score = 5.11115 sequence = TTTGGCACCTCTCTTGCCT Gene: Dret_2267: Ammonium transporter |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -45 score = 5.23919 sequence = TATGGCACCGTCCTTGCTC Gene: Dbac_3048: ammonium transporter |
*
Desulfovibrio desulfuricans G20 Site: position = -75 score = 5.19045 sequence = TCTGGCCTGCTGCTTGCTT Gene: Dde_2311: Ammonium transporter |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -126 score = 4.74915 sequence = CTTGGCACAGATAGTGCTT Gene: Ddes_1147: Ammonium transporter |
Gene: DMR_34890: Ammonium transporter |
*
Desulfovibrio piger ATCC 29098 Site: position = -127 score = 5.14211 sequence = TATGGCACAGGGCTTGCTT Gene: DESPIG_00642: Ammonium transporter |
*
Desulfovibrio salexigens DSM 2638 Site: position = -145 score = 4.83159 sequence = TTTGGCACAATGCGTGCTT Gene: Desal_3438: Ammonium transporter |
*
Desulfovibrio vulgaris Hildenborough Site: position = -81 score = 5.04557 sequence = GTTGGCACGCGACTTGCCT Gene: DVU1231: Ammonium transporter |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -98 score = 5.32954 sequence = GATGGCACGCTCCTTGCCT Gene: DvMF_0866: Ammonium transporter |
|
Ammonium transporter |
| glnB |
Gene: Dret_2268: Nitrogen regulatory protein P-II |
Gene: Dbac_3047: nitrogen regulatory protein P-II |
Gene: Dde_2310: Nitrogen regulatory protein P-II |
Gene: Ddes_1148: Nitrogen regulatory protein P-II |
Gene: DMR_34880: Nitrogen regulatory protein P-II |
Gene: DESPIG_00641: Nitrogen regulatory protein P-II |
Gene: Desal_3437: Nitrogen regulatory protein P-II |
Gene: DVU1232: Nitrogen regulatory protein P-II |
Gene: DvMF_0865: Nitrogen regulatory protein P-II |
|
Nitrogen regulatory protein P-II |
| DESPIG_00640 |
|
|
|
|
|
Gene: DESPIG_00640: hypothetical protein |
|
|
|
|
hypothetical protein |
| Ddes_1149 |
|
|
|
Gene: Ddes_1149: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
|
Gene: DESPIG_00639: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
|
|
|
|
Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
| glnD |
Gene: Dret_2269: [Protein-PII] uridylyltransferase (EC 2.7.7.59) |
Gene: Dbac_3046: UTP-GlnB uridylyltransferase, GlnD |
Gene: Dde_2309: Probable [Protein-PII] uridylyltransferase |
|
Gene: DMR_34870: [Protein-PII] uridylyltransferase (EC 2.7.7.59) |
|
Gene: Desal_3436: [Protein-PII] uridylyltransferase (EC 2.7.7.59) |
Gene: DVU1233: Probable [Protein-PII] uridylyltransferase |
Gene: DvMF_0864: [Protein-PII] uridylyltransferase (EC 2.7.7.59) |
|
[Protein-PII] uridylyltransferase (EC 2.7.7.59) |
| CRON 32. | |||||||||||
| flgE |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -84 score = 4.10468 sequence = CATGGACCCATTCCTGCAT Gene: Dbac_1614: Flagellar hook protein FlgE |
*
Desulfovibrio desulfuricans G20 Site: position = -86 score = 5.28436 sequence = TCTGGCACGGTCCATGCTT Gene: Dde_0298: Flagellar hook protein FlgE |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -76 score = 5.25482 sequence = TCTGGCACGCTCTCTGCAT Gene: Ddes_2091: Flagellar hook protein FlgE |
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -115 score = 5.24956 sequence = TTAGGCACGCCCCTTGCTT Gene: Desal_2938: Flagellar hook protein FlgE |
*
Desulfovibrio vulgaris Hildenborough Site: position = -59 score = 5.30335 sequence = TCTGGCACGGCTCGTGCTT Gene: DVU0307: Flagellar hook protein FlgE |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -128 score = 5.18 sequence = GCTGGCACGGCTCGTGCTT Gene: DvMF_1808: Flagellar hook protein FlgE |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -77 score = 5.21938 sequence = CTTGGCATGGCTTCTGCTT Gene: LI0348: Flagellar hook protein FlgE |
Flagellar hook protein FlgE |
| CRON 33. | |||||||||||
| dtcP |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -109 score = 4.87112 sequence = GATGGCATGCATTCTGCTC Gene: Dbac_1588: TRAP-type C4-dicarboxylate transport system, periplasmic component |
*
Desulfovibrio desulfuricans G20 Site: position = -187 score = 4.42307 sequence = ATTGGAACACGCCTTGCCG Site: position = -84 score = 4.71613 sequence = TTTGGCACATTACCTGCTC Gene: Dde_1275: TRAP-type C4-dicarboxylate transport system, periplasmic component |
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -91 score = 5.13015 sequence = TTTGGCACGTTCCCTGCTC Gene: DVU2822: TRAP-type C4-dicarboxylate transport system, periplasmic component |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -183 score = 4.19385 sequence = GACGGCATGTCGGTTGCAA Gene: DvMF_1932: TRAP-type C4-dicarboxylate transport system, periplasmic component |
|
TRAP-type C4-dicarboxylate transport system, periplasmic component |
| dctM |
|
Gene: Dbac_1589: TRAP dicarboxylate transporter, DctM subunit |
Gene: Dde_1274: TRAP dicarboxylate transporter, DctM subunit |
|
|
|
|
Gene: DVU2823: TRAP dicarboxylate transporter, DctM subunit |
Gene: DvMF_1931: TRAP dicarboxylate transporter, DctM subunit |
|
TRAP dicarboxylate transporter, DctM subunit |
| DVU2824 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -156 score = 4.31808 sequence = ATTGGCACAGAGAATGCTC Gene: Dbac_1587: Pyruvate formate-lyase (EC 2.3.1.54) |
Gene: Dde_1273: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -123 score = 4.71007 sequence = TGTGGCATGCCCCATGCAA Gene: Ddes_1436: Pyruvate formate-lyase (EC 2.3.1.54) |
|
*
Desulfovibrio piger ATCC 29098 Site: position = -80 score = 4.77463 sequence = AATGGCACAGGCATTGCTA Gene: DESPIG_02849: Pyruvate formate-lyase (EC 2.3.1.54) |
|
Gene: DVU2824: Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Pyruvate formate-lyase (EC 2.3.1.54) |
| DVU2825 |
|
Gene: Dbac_1586: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Dde_1272: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Ddes_1435: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Gene: DESPIG_02850: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Gene: DVU2825: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| DVU2827 |
|
Gene: Dbac_1585: PAS modulated sigma54 specific transcriptional regulator, Fis family |
Gene: Dde_1270: PAS modulated sigma54 specific transcriptional regulator, Fis family |
Gene: Ddes_1434: PAS modulated sigma54 specific transcriptional regulator, Fis family |
|
Gene: DESPIG_02851: PAS modulated sigma54 specific transcriptional regulator, Fis family |
|
Gene: DVU2827: PAS modulated sigma54 specific transcriptional regulator, Fis family |
|
|
PAS modulated sigma54 specific transcriptional regulator, Fis family |
| Ddes_1433 |
|
|
|
Gene: Ddes_1433: hypothetical protein |
|
|
|
|
|
|
hypothetical protein |
| DvMF_1930 |
|
|
|
|
|
|
|
|
Gene: DvMF_1930: hypothetical protein |
|
hypothetical protein |
| DVU2820 |
|
Gene: Dbac_1590: amidohydrolase family protein |
*
Desulfovibrio desulfuricans G20 Site: position = -54 score = 4.50471 sequence = CAAGGCACGCTTTTTGCGA Gene: Dde_1278: amidohydrolase family protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -228 score = 5.10813 sequence = TCTGGCACGCATCCTGCAA Gene: Ddes_1437: amidohydrolase family protein |
|
Gene: DESPIG_02848: amidohydrolase family protein |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -58 score = 4.75077 sequence = CTGGGCATGGTTCTTGCCT Gene: DVU2820: amidohydrolase family protein |
|
|
amidohydrolase family protein |
| Ddes_0220 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -190 score = 4.63999 sequence = TCTGGAACACTTCTTGTAT Gene: Ddes_0220: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
|
|
|
|
*2
Desulfovibrio vulgaris str. Miyazaki F Site: position = -119 score = 3.79331 sequence = GCAGGCTCATATTTTGCTA Gene: DvMF_1934: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) Gene: DvMF_0515: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
|
Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) |
| DVU2280 |
|
|
|
Gene: Ddes_0221: cationic amino acid transporter |
|
*
Desulfovibrio piger ATCC 29098 Site: position = -147 score = 5.34058 sequence = TATGGCACGCTTGTTGCTG Gene: DESPIG_02139: cationic amino acid transporter |
*
Desulfovibrio salexigens DSM 2638 Site: position = -300 score = 5.12285 sequence = ATTGGCACCCTGTTTGCTA Gene: Desal_3524: cationic amino acid transporter |
*
Desulfovibrio vulgaris Hildenborough Site: position = -132 score = 4.79598 sequence = GCTGGTACGCTTGTTGCTG Gene: DVU2280: cationic amino acid transporter |
|
|
cationic amino acid transporter |
| CRON 34. | |||||||||||
| amt |
*
Desulfohalobium retbaense DSM 5692 Site: position = -70 score = 4.80781 sequence = ATTGGCCCCATCCTTGCTA Gene: Dret_0113: Ammonium transporter |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -56 score = 4.81363 sequence = TTTGGCACTGCCTGTGCTT Gene: Dbac_3049: Ammonium transporter |
*
Desulfovibrio desulfuricans G20 Site: position = -71 score = 4.89278 sequence = TTTGGCCCTCCTTTTGCTC Gene: Dde_3492: Ammonium transporter |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -65 score = 5.1411 sequence = TTTGGCACAGTCCATGCTT Gene: Desal_3066: Ammonium transporter |
|
|
|
Ammonium transporter |
| glnB |
Gene: Dret_0112: Nitrogen regulatory protein P-II |
Gene: Dbac_3050: Nitrogen regulatory protein P-II |
Gene: Dde_3493: Nitrogen regulatory protein P-II |
|
|
|
Gene: Desal_3067: Nitrogen regulatory protein P-II |
|
|
|
Nitrogen regulatory protein P-II |
| CRON 35. | |||||||||||
| Dde_0657 |
*
Desulfohalobium retbaense DSM 5692 Site: position = -82 score = 4.63907 sequence = ATCGGAACGGATATTGCTT Gene: Dret_0164: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: Dbac_1361: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
*
Desulfovibrio desulfuricans G20 Site: position = -83 score = 4.6009 sequence = ACCGGCACGGTTTGTGCTG Gene: Dde_0657: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0544: 4Fe-4S ferredoxin iron-sulfur binding domain protein Gene: Ddes_2065: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DMR_38630: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Gene: DESPIG_02228: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
*
Desulfovibrio salexigens DSM 2638 Site: position = -80 score = 4.29732 sequence = GTAGGTACGGATTCTGCTT Gene: Desal_0829: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -68 score = 4.54265 sequence = TCAGGCACAGTTCCTGCTC Gene: DVU3143: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -95 score = 4.46693 sequence = CCGGGCATGCTTCCTGCTC Gene: DvMF_1693: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|
4Fe-4S ferredoxin iron-sulfur binding domain protein |
| Dde_0656 |
Gene: Dret_0165: iron-sulfur cluster-binding protein |
Gene: Dbac_1360: iron-sulfur cluster-binding protein |
Gene: Dde_0656: iron-sulfur cluster-binding protein |
Gene: Ddes_2066: iron-sulfur cluster-binding protein |
Gene: DMR_38620: iron-sulfur cluster-binding protein |
Gene: DESPIG_02229: iron-sulfur cluster-binding protein |
Gene: Desal_0830: iron-sulfur cluster-binding protein |
|
|
|
iron-sulfur cluster-binding protein |
| DVU3144 |
*
Desulfohalobium retbaense DSM 5692 Site: position = -228 score = 4.11382 sequence = TCAGGCATATAAATTGCTT Gene: Dret_0167: cytochrome c family protein |
Gene: Dbac_1392: cytochrome c family protein |
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -104 score = 5.09486 sequence = TTTGGCACGTTCCCTGCTG Gene: DMR_33620: cytochrome c family protein |
|
Gene: Desal_0831: cytochrome c family protein |
Gene: DVU3144: cytochrome c family protein |
Gene: DvMF_1694: cytochrome c family protein |
|
cytochrome c family protein |
| DVU3145 |
Gene: Dret_0166: Cytochrome B561 |
Gene: Dbac_1393: Cytochrome B561 |
|
|
Gene: DMR_33610: Cytochrome B561 |
|
Gene: Desal_0832: Cytochrome B561 |
Gene: DVU3145: Cytochrome B561 |
Gene: DvMF_1695: Cytochrome B561 |
|
Cytochrome B561 |
| CRON 36. | |||||||||||
| por |
Gene: Dret_1036: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -91 score = 4.28116 sequence = AGTGGCACAAAACTTGTTT Gene: Dbac_1044: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Desulfovibrio desulfuricans G20 Site: position = -163 score = 4.84357 sequence = CATGGCATACTTTTTGTTT Gene: Dde_3237: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: Ddes_0298: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Desulfovibrio magneticus RS-1 Site: position = -84 score = 4.35709 sequence = GATGGCACACGACTTGCGA Gene: DMR_20070: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: DESPIG_02167: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -153 score = 4.76445 sequence = ATTGGCACATTTCTTGTTA Gene: DVU3025: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -368 score = 4.78836 sequence = ACTGGCACACTTCTTGTTG Gene: DvMF_1860: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: LI0278: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
| lldP |
*
Desulfohalobium retbaense DSM 5692 Site: position = -90 score = 4.54098 sequence = TATGGCATGGATATTGAAT Gene: Dret_1039: L-lactate permease |
Gene: Dbac_1045: L-lactate permease |
Gene: Dde_3238: L-lactate permease |
Gene: Ddes_2169: L-lactate permease |
|
|
Gene: Desal_2573: L-lactate permease |
*2
Desulfovibrio vulgaris Hildenborough Gene: DVU3026: L-lactate permease Site: position = -211 score = 4.76746 sequence = CTTGGCCCGGTAATTGCTG Gene: DVU2451: L-lactate permease |
Gene: DvMF_1861: L-lactate permease |
|
L-lactate permease |
| glcD |
Gene: Dret_1038: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Dbac_1046: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Dde_3239: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Ddes_1994: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: DMR_20060: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
*
Desulfovibrio piger ATCC 29098 Site: position = -112 score = 4.02453 sequence = TTCGGAGCAGGTCTTGCTG Gene: DESPIG_02393: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: Desal_2572: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: DVU3027: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
Gene: DvMF_1862: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
|
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD |
| glcF |
Gene: Dret_1037: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Dbac_1047: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Dde_3240: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Ddes_1993: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: DMR_20050: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: DESPIG_02394: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: Desal_2571: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: DVU3028: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
Gene: DvMF_1863: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
|
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF |
| pta |
Gene: Dret_1035: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: Dbac_1048: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: Dde_3241: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: Ddes_0297: Phosphate acetyltransferase (EC 2.3.1.8) |
|
Gene: DESPIG_02164: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: Desal_2570: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: DVU3029: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: DvMF_1864: Phosphate acetyltransferase (EC 2.3.1.8) |
Gene: LI0279: Phosphate acetyltransferase (EC 2.3.1.8) |
Phosphate acetyltransferase (EC 2.3.1.8) |
| ackA |
Gene: Dret_1034: Acetate kinase (EC 2.7.2.1) |
Gene: Dbac_1049: Acetate kinase (EC 2.7.2.1) |
Gene: Dde_3242: Acetate kinase (EC 2.7.2.1) |
Gene: Ddes_0296: Acetate kinase (EC 2.7.2.1) |
|
Gene: DESPIG_02163: Acetate kinase (EC 2.7.2.1) |
Gene: Desal_2569: Acetate kinase (EC 2.7.2.1) |
Gene: DVU3030: Acetate kinase (EC 2.7.2.1) |
Gene: DvMF_1865: Acetate kinase (EC 2.7.2.1) |
Gene: LI0280: Acetate kinase (EC 2.7.2.1) |
Acetate kinase (EC 2.7.2.1) |
| DVU3031 |
Gene: Dret_1033: BioD-like N-terminal domain of phosphotransacetylase |
|
Gene: Dde_3243: BioD-like N-terminal domain of phosphotransacetylase |
|
Gene: DMR_20030: BioD-like N-terminal domain of phosphotransacetylase |
|
Gene: Desal_3044: BioD-like N-terminal domain of phosphotransacetylase |
Gene: DVU3031: BioD-like N-terminal domain of phosphotransacetylase |
Gene: DvMF_1866: BioD-like N-terminal domain of phosphotransacetylase |
|
BioD-like N-terminal domain of phosphotransacetylase |
| lldG |
Gene: Dret_1032: L-lactate dehydrogenase, hypothetical protein subunit LldG |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -53 score = 4.98372 sequence = GCTGGCACGCATCCTGCCT Gene: Dbac_1728: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: Dde_3244: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: Ddes_1992: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: DMR_20010: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: DESPIG_02395: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: Desal_2568: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: DVU3032: L-lactate dehydrogenase, hypothetical protein subunit LldG |
Gene: DvMF_1867: L-lactate dehydrogenase, hypothetical protein subunit LldG |
|
L-lactate dehydrogenase, hypothetical protein subunit LldG |
| lldEF |
Gene: Dret_1031: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Dbac_1729: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Dde_3245: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Ddes_1991: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: DMR_20000: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: DESPIG_02396: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Desal_2567: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: DVU3033: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: DvMF_1868: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
|
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| DMR_20040 |
|
|
|
|
Gene: DMR_20040: CoA-binding domain protein |
|
Gene: Desal_3045: CoA-binding domain protein |
|
|
|
CoA-binding domain protein |
| DMR_20020 |
|
|
|
|
Gene: DMR_20020: L-lactate permease |
|
|
|
|
|
L-lactate permease |
| CRON 37. | |||||||||||
| zraS |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -112 score = 4.32513 sequence = TCAGGCAGGGTATTTGCTA Gene: Dbac_1016: Sensor protein of sigma-54-dependent two-component system |
*
Desulfovibrio desulfuricans G20 Site: position = -208 score = 4.34067 sequence = TCTGGTGCGTTGCTTGCAT Gene: Dde_0110: Sensor protein of sigma-54-dependent two-component system |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -27 score = 3.41371 sequence = ATTTGCAAAAATCATGCAA Gene: Ddes_0186: Sensor protein of sigma-54-dependent two-component system |
*
Desulfovibrio magneticus RS-1 Site: position = -114 score = 4.06391 sequence = TTTGGAACGGGGGATGCAG Gene: DMR_19620: Sensor protein of sigma-54-dependent two-component system |
Gene: DESPIG_02785: Sensor protein of sigma-54-dependent two-component system |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -247 score = 4.52116 sequence = GTTGGTGCAGTCCTTGCTT Gene: DVU3382: Sensor protein of sigma-54-dependent two-component system |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -244 score = 4.52669 sequence = GCTGGTGCGCTTGTTGCTT Gene: DvMF_2148: Sensor protein of sigma-54-dependent two-component system |
Gene: LI1078: Sensor protein of sigma-54-dependent two-component system |
Sensor protein of sigma-54-dependent two-component system |
| zraR |
|
Gene: Dbac_1017: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dde_0109: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Ddes_0187: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DMR_19630: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DESPIG_02784: Two component, sigma54 specific, transcriptional regulator, Fis family |
|
Gene: DVU3381: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DvMF_2149: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: LI1079: Two component, sigma54 specific, transcriptional regulator, Fis family |
Two component, sigma54 specific, transcriptional regulator, Fis family |
| CRON 38. | |||||||||||
| Desal_0361 |
|
|
Gene: Dde_0473: Formate dehydrogenase, alpha subunit |
|
*2
Desulfovibrio magneticus RS-1 Site: position = -13 score = 4.68602 sequence = CCTGGCATGGCCTGTGCCT Gene: DMR_43550: Formate dehydrogenase, alpha subunit Gene: DMR_43540: Formate dehydrogenase, alpha subunit |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -20 score = 4.81403 sequence = TATGGCATGTCTTATGCTA Gene: Desal_0361: Formate dehydrogenase, alpha subunit |
|
|
|
Formate dehydrogenase, alpha subunit |
| DMR_42610 |
|
|
|
|
Gene: DMR_43530: putative transposase |
|
|
|
|
|
putative transposase |
| DMR_43520 |
|
|
Gene: Dde_0474: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|
Gene: DMR_43520: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|
Gene: Desal_0362: 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|
|
|
4Fe-4S ferredoxin iron-sulfur binding domain protein |
| fhcC |
|
|
Gene: Dde_0475: Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2) |
|
Gene: DMR_43510: Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2) |
|
Gene: Desal_0363: Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2) |
|
|
|
Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2) |
| fhcD |
|
|
Gene: Dde_0476: Fe-S-cluster-containing hydrogenase components 2 |
|
Gene: DMR_43500: Fe-S-cluster-containing hydrogenase components 2 |
|
Gene: Desal_0364: Fe-S-cluster-containing hydrogenase components 2 |
|
|
|
Fe-S-cluster-containing hydrogenase components 2 |
| DVU1854 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -79 score = 5.13281 sequence = TCTGGCATCCATTTTGCTA Gene: Dde_1940: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -120 score = 5.28432 sequence = TCTGGCATCCATCTTGCTT Gene: Ddes_1230: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = -54 score = 4.45203 sequence = CCGGGCATCGTCCTTGCAT Gene: DMR_05510: hypothetical protein |
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = 34 score = 5.01384 sequence = TTAGGCACGCATATTGCTT Gene: DVU1854: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -69 score = 5.09383 sequence = GCTGGCACCGATCTTGCTC Gene: DvMF_0386: hypothetical protein |
|
hypothetical protein |
| CRON 39. | |||||||||||
| pspA |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -61 score = 4.7315 sequence = ACTGGCATGATCTCTGCTC Gene: Dbac_1225: Phage shock protein A |
*
Desulfovibrio desulfuricans G20 Site: position = -49 score = 4.36524 sequence = TCTGGCATAGAAGGTGCTT Gene: Dde_3226: Phage shock protein A |
|
*
Desulfovibrio magneticus RS-1 Site: position = -60 score = 5.42834 sequence = TCTGGCACGCTCCCTGCTT Gene: DMR_38330: Phage shock protein A |
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -46 score = 4.69685 sequence = CCCGGCACGCTTCGTGCTG Gene: DVU2988: Phage shock protein A |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -60 score = 5.10803 sequence = GCTGGCACGGTTGCTGCTT Gene: DvMF_1799: Phage shock protein A |
|
Phage shock protein A |
| pspB |
|
Gene: Dbac_1224: phage shock protein B |
*
Desulfovibrio desulfuricans G20 Site: position = -74 score = 4.32814 sequence = GCTGGCCTGTATGTTGCCA Gene: Dde_3225: phage shock protein B |
|
2
Desulfovibrio magneticus RS-1 Gene: DMR_38320: phage shock protein B Gene: DMR_38300: phage shock protein B |
|
|
Gene: DVU2987: phage shock protein B |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -272 score = 4.52853 sequence = GCTGGCCTGGCGGTTGCTG Site: position = -251 score = 4.38241 sequence = GCTGGCCTGGCGGTTGCAG Site: position = -230 score = 4.52853 sequence = GCTGGCCTGGCGGTTGCTG Gene: DvMF_1800: phage shock protein B |
|
phage shock protein B |
| pspC |
|
Gene: Dbac_1223: Phage shock protein C |
Gene: Dde_3224: Phage shock protein C |
|
Gene: DMR_38290: Phage shock protein C |
|
|
Gene: DVU2986: Phage shock protein C |
Gene: DvMF_1801: Phage shock protein C |
|
Phage shock protein C |
| CRON 40. | |||||||||||
| DVU0943 |
*
Desulfohalobium retbaense DSM 5692 Site: position = -147 score = 4.58648 sequence = TTTGGTTTGCTTTTTGCTT Gene: Dret_1220: membrane protein, putative |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -84 score = 4.89023 sequence = TGTGGCAGGTCTTTTGCTT Gene: Dbac_2656: membrane protein, putative |
*
Desulfovibrio desulfuricans G20 Site: position = -116 score = 5.24365 sequence = TCTGGCACGCTTCTTGTTA Gene: Dde_0876: membrane protein, putative |
|
|
Gene: DESPIG_00792: membrane protein, putative |
*
Desulfovibrio salexigens DSM 2638 Site: position = -87 score = 5.19467 sequence = TCTGGCCCGCCTTTTGCCT Gene: Desal_0416: membrane protein, putative |
*2
Desulfovibrio vulgaris Hildenborough Site: position = -73 score = 4.8771 sequence = CATTGCACGCTTCTTGCTC Gene: DVU2133: membrane protein, putative Site: position = -73 score = 5.18622 sequence = TCTGGCACGCTTCTTGTTC Gene: DVU0943: membrane protein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -85 score = 5.27391 sequence = TTTGGCACGCCTCTTGATT Gene: DvMF_1363: membrane protein, putative |
|
membrane protein, putative |
| DVU0944 |
|
Gene: Dbac_2655: hypothetical protein |
Gene: Dde_0877: hypothetical protein |
|
|
Gene: DESPIG_00793: hypothetical protein |
Gene: Desal_0415: hypothetical protein |
2
Desulfovibrio vulgaris Hildenborough Gene: DVU2132: hypothetical protein Gene: DVU0944: hypothetical protein |
Gene: DvMF_1362: hypothetical protein |
|
hypothetical protein |
| DVU0945 |
Gene: Dret_0969: PAS/PAC sensor signal transduction histidine kinase |
Gene: Dbac_2654: PAS/PAC sensor signal transduction histidine kinase |
Gene: Dde_0878: PAS/PAC sensor signal transduction histidine kinase |
|
|
|
Gene: Desal_0413: PAS/PAC sensor signal transduction histidine kinase |
Gene: DVU0945: PAS/PAC sensor signal transduction histidine kinase |
Gene: DvMF_1361: PAS/PAC sensor signal transduction histidine kinase |
|
PAS/PAC sensor signal transduction histidine kinase |
| DVU0946 |
Gene: Dret_0970: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dbac_2653: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dde_0879: Two component, sigma54 specific, transcriptional regulator, Fis family |
|
|
|
Gene: Desal_0412: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DVU0946: Two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DvMF_1360: Two component, sigma54 specific, transcriptional regulator, Fis family |
|
Two component, sigma54 specific, transcriptional regulator, Fis family |
| Dret_1219 |
Gene: Dret_1219: hypothetical protein |
|
|
|
|
|
|
|
|
|
hypothetical protein |
| CRON 41. | |||||||||||
| Dbac_2669 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -55 score = 4.96818 sequence = CATGGCACGCGCCTTGTTT Gene: Dbac_2669: hypothetical protein |
|
|
Gene: DMR_10820: hypothetical protein |
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -56 score = 4.7825 sequence = CTTGGCACGGGGCTTGTTA Gene: DVU3302: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -53 score = 5.07585 sequence = TCTGGCACGGCGCTTGTTT Gene: DvMF_2106: hypothetical protein |
|
hypothetical protein |
| DVU3301 |
|
Gene: Dbac_2670: hypothetical protein |
|
|
Gene: DMR_10830: hypothetical protein |
|
|
Gene: DVU3301: hypothetical protein |
Gene: DvMF_2105: hypothetical protein |
|
hypothetical protein |
| DVU3300 |
|
Gene: Dbac_2672: hypothetical protein |
|
|
Gene: DMR_10840: hypothetical protein |
|
|
Gene: DVU3300: hypothetical protein |
Gene: DvMF_2104: hypothetical protein |
|
hypothetical protein |
| DVU3299 |
|
Gene: Dbac_2673: TSUP family transporter |
|
|
Gene: DMR_10850: TSUP family transporter |
|
|
Gene: DVU3299: TSUP family transporter |
Gene: DvMF_2103: TSUP family transporter |
|
TSUP family transporter |
| DVU3298 |
|
|
|
|
|
|
|
Gene: DVU3298: universal stress protein |
Gene: DvMF_2102: universal stress protein |
|
universal stress protein |
| Dbac_2671 |
|
Gene: Dbac_2671: Sulfate permease and related transporters (MFS superfamily) |
Gene: Dde_3641: Sulfate permease and related transporters (MFS superfamily) |
|
|
|
Gene: Desal_1131: Sulfate permease and related transporters (MFS superfamily) |
|
|
|
Sulfate permease and related transporters (MFS superfamily) |
| CRON 42. | |||||||||||
| mltC |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = 8 score = 4.32429 sequence = AATGGCATTGCCGCTGCTT Gene: Dde_1786: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -173 score = 4.09075 sequence = AATGGCAGCAAATTTGCAT Gene: Ddes_2079: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -90 score = 5.01269 sequence = ACTGGCCCGGATGTTGCTT Gene: DVU1536: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -183 score = 4.86769 sequence = CTTGGCGCGGAATTTGCTT Gene: DvMF_0177: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
Gene: LI1174: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) |
| DVU1537 |
|
|
Gene: Dde_1787: outer membrane chaperone Skp (OmpH) |
|
|
|
|
Gene: DVU1537: outer membrane chaperone Skp (OmpH) |
Gene: DvMF_0178: outer membrane chaperone Skp (OmpH) |
Gene: LI1175: outer membrane chaperone Skp (OmpH) |
outer membrane chaperone Skp (OmpH) |
| CRON 43. | |||||||||||
| ald |
*
Desulfohalobium retbaense DSM 5692 Site: position = -210 score = 4.58061 sequence = TTTGGCAAAGTTTGTGCAT Gene: Dret_1485: Alanine dehydrogenase (EC 1.4.1.1) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -67 score = 4.35996 sequence = TGTGGTAAGCTTTTTGCCA Gene: Dbac_3071: Alanine dehydrogenase (EC 1.4.1.1) |
*
Desulfovibrio desulfuricans G20 Site: position = -84 score = 5.09994 sequence = TCTGGCAAGGTGTTTGCTT Gene: Dde_1553: Alanine dehydrogenase (EC 1.4.1.1) |
|
*
Desulfovibrio magneticus RS-1 Site: position = -76 score = 4.64846 sequence = CCTGGCAAGGGACTTGCTA Gene: DMR_45640: Alanine dehydrogenase (EC 1.4.1.1) |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -111 score = 4.84306 sequence = TTTGGCATGCGGATTGCCT Gene: Desal_3303: Alanine dehydrogenase (EC 1.4.1.1) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -124 score = 5.01295 sequence = GTTGGCAAGGCCTTTGCTA Gene: DVU0571: Alanine dehydrogenase (EC 1.4.1.1) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -120 score = 4.99894 sequence = GTTGGCAAGGCGTTTGCTT Gene: DvMF_2154: Alanine dehydrogenase (EC 1.4.1.1) |
|
Alanine dehydrogenase (EC 1.4.1.1) |
| CRON 44. | |||||||||||
| DvMF_2420 |
|
|
|
|
|
*2
Desulfovibrio piger ATCC 29098 Site: position = -54 score = 5.22538 sequence = CATGGCACGCTTTATGCTT Gene: DESPIG_00690: hypothetical protein Site: position = -59 score = 4.58309 sequence = CATGGTACGTTTTATGCTT Gene: DESPIG_00156: hypothetical protein |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -62 score = 4.64067 sequence = CATGGCATACTTGCTGCTA Gene: DVUA203: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -56 score = 4.64875 sequence = TTTGGCATCCTTGCTGCAA Gene: DvMF_2420: hypothetical protein |
Gene: LI0545: hypothetical protein |
hypothetical protein |
| DvMF_2422 |
|
|
|
|
|
Gene: DESPIG_00693: Type III secretion chaperone protein for YopD (SycD) |
|
Gene: DVUA0109: Type III secretion chaperone protein for YopD (SycD) |
Gene: DvMF_2422: Type III secretion chaperone protein for YopD (SycD) |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -193 score = 4.72107 sequence = TTTGGCATAGTCTCTGCAG Gene: LI1157: Type III secretion chaperone protein for YopD (SycD) |
Type III secretion chaperone protein for YopD (SycD) |
| DvMF_2423 |
|
|
|
|
|
Gene: DESPIG_00694: Type III secretion host injection protein (YopB) |
|
Gene: DVUA0110: Type III secretion host injection protein (YopB) |
Gene: DvMF_2423: Type III secretion host injection protein (YopB) |
Gene: LI1158: Type III secretion host injection protein (YopB) |
Type III secretion host injection protein (YopB) |
| DvMF_2424 |
|
|
|
|
|
Gene: DESPIG_00695: Type III secretion host injection and negative regulator protein (YopD) |
|
Gene: DVUA0111: Type III secretion host injection and negative regulator protein (YopD) |
Gene: DvMF_2424: Type III secretion host injection and negative regulator protein (YopD) |
|
Type III secretion host injection and negative regulator protein (YopD) |
| DvMF_2425 |
|
|
|
|
|
Gene: DESPIG_00696: Tir chaperone family protein |
|
Gene: DVUA201: Tir chaperone family protein |
Gene: DvMF_2425: Tir chaperone family protein |
|
Tir chaperone family protein |
| yscC |
|
|
|
|
|
Gene: DESPIG_00697: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) |
|
Gene: DVUA0112: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) |
Gene: DvMF_2426: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) |
Gene: LI1160: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) |
Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) |
| DvMF_2427 |
|
|
|
|
|
Gene: DESPIG_00698: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) |
|
Gene: DVUA0113: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) |
Gene: DvMF_2427: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) |
Gene: LI1161: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) |
Type III secretion inner membrane protein (YscD,homologous to flagellar export components) |
| DvMF_2428 |
|
|
|
|
|
Gene: DESPIG_00699: hypothetical protein |
|
Gene: DVUA0114: hypothetical protein |
Gene: DvMF_2428: hypothetical protein |
|
hypothetical protein |
| DvMF_2429 |
|
|
|
|
|
Gene: DESPIG_00700: Type III secretion system protein, YscF family |
|
Gene: DVUA0115: Type III secretion system protein, YscF family |
Gene: DvMF_2429: Type III secretion system protein, YscF family |
|
Type III secretion system protein, YscF family |
| DvMF_2430 |
|
|
|
|
|
Gene: DESPIG_00701: hypothetical protein |
|
Gene: DVUA0116: hypothetical protein |
Gene: DvMF_2430: hypothetical protein |
Gene: LI0544: hypothetical protein |
hypothetical protein |
| DvMF_2431 |
|
|
|
|
|
Gene: DESPIG_00702: hypothetical protein |
|
Gene: DORF2111 |
Gene: DvMF_2431: hypothetical protein |
Gene: LI1162: hypothetical protein |
hypothetical protein |
| escJ |
|
|
|
|
|
Gene: DESPIG_00703: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
|
Gene: DVUA0117: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
Gene: DvMF_2432: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
2
Lawsonia intracellularis PHE/MN1-00 Gene: LI0543: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Gene: LI1163: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
| DvMF_2433 |
|
|
|
|
|
Gene: DESPIG_00704: hypothetical protein |
|
Gene: DVUA200 |
Gene: DvMF_2433: hypothetical protein |
Gene: LI0542: hypothetical protein |
hypothetical protein |
| sctL |
|
|
|
|
|
Gene: DESPIG_00705: type III secretion protein, YopL family putative type III secretion protein |
|
Gene: DVUA0118: type III secretion protein, YopL family putative type III secretion protein |
Gene: DvMF_2434: type III secretion protein, YopL family putative type III secretion protein |
2
Lawsonia intracellularis PHE/MN1-00 Gene: LI1164: type III secretion protein, YopL family putative type III secretion protein Gene: LI0541: type III secretion protein, YopL family putative type III secretion protein |
type III secretion protein, YopL family putative type III secretion protein |
| sctN |
|
|
|
|
|
Gene: DESPIG_00706: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) |
|
Gene: DVUA0119: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -38 score = 4.23798 sequence = CGTGGCGCGCGCCCTGCCT Gene: DvMF_2435: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) |
Gene: LI0540: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) |
Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) |
| DvMF_2436 |
|
|
|
|
|
Gene: DESPIG_00707: Type III secretion spans bacterial envelope protein (YscO) |
|
Gene: DVUA0119.1 |
Gene: DvMF_2436: Type III secretion spans bacterial envelope protein (YscO) |
Gene: LI0539: Type III secretion spans bacterial envelope protein (YscO) |
Type III secretion spans bacterial envelope protein (YscO) |
| DvMF_2437 |
|
|
|
|
|
|
|
Gene: DVUA0120: HpaP protein; Type III secretion protein (YscP) |
Gene: DvMF_2437: HpaP protein; Type III secretion protein (YscP) |
Gene: LI1165: HpaP protein; Type III secretion protein (YscP) |
HpaP protein; Type III secretion protein (YscP) |
| DvMF_2438 |
|
|
|
|
|
|
|
Gene: DVUA0121: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) |
Gene: DvMF_2438: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) |
2
Lawsonia intracellularis PHE/MN1-00 Gene: LI1166: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) Gene: LI0538: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) |
Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) |
| yscR |
|
|
|
|
|
|
|
Gene: DVUA0122: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) |
Gene: DvMF_2439: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) |
Gene: LI0537: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) |
hypothetical protein |
| DvMF_2440 |
|
|
|
|
|
Gene: DESPIG_00711: anti-anti-sigma factor |
|
Gene: DVUA0123: anti-anti-sigma factor |
Gene: DvMF_2440: anti-anti-sigma factor |
Gene: LI1167: anti-anti-sigma factor |
anti-anti-sigma factor |
| rsbW |
|
|
|
|
|
Gene: DESPIG_00712: putative anti-sigma regulatory factor, serine/threonine protein kinase |
|
Gene: DVUA0124: putative anti-sigma regulatory factor, serine/threonine protein kinase |
Gene: DvMF_2441: putative anti-sigma regulatory factor, serine/threonine protein kinase |
Gene: LI1168: putative anti-sigma regulatory factor, serine/threonine protein kinase |
putative anti-sigma regulatory factor, serine/threonine protein kinase |
| slt |
|
|
|
|
|
Gene: DESPIG_00713: transglycosylase, SLT family |
|
Gene: DVUA0125: transglycosylase, SLT family |
|
Gene: LI1169: transglycosylase, SLT family |
transglycosylase, SLT family |
| DvMF_2421 |
|
|
|
|
|
4
Desulfovibrio piger ATCC 29098 Gene: DESPIG_00691: hypothetical protein Gene: DESPIG_00692: hypothetical protein Gene: DESPIG_00157: hypothetical protein Gene: DESPIG_00158: hypothetical protein |
|
|
Gene: DvMF_2421: hypothetical protein |
*3
Lawsonia intracellularis PHE/MN1-00 Gene: LI1154: hypothetical protein Gene: LI1155: hypothetical protein Site: position = -151 score = 4.62912 sequence = ATTGGTATACTCTTTGCTG Gene: LI1156: hypothetical protein |
hypothetical protein |
| LI1159 |
|
|
|
|
|
|
|
|
|
Gene: LI1159: hypothetical protein |
hypothetical protein |
| CRON 45. | |||||||||||
| Ddes_2342 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -63 score = 4.72175 sequence = TTTGGCACGACTACTGCAG Gene: Ddes_2342: choline/carnitine/betaine transporter |
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -184 score = 5.20132 sequence = TTTGGCCCGCTTATTGCTC Gene: Desal_3549: choline/carnitine/betaine transporter |
|
|
|
choline/carnitine/betaine transporter |
| Ddes_2343 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -81 score = 4.59932 sequence = GTTGGCATACTTATTGATT Gene: Ddes_2343: type I phosphodiesterase/nucleotide pyrophosphatase |
|
|
Gene: Desal_3548: type I phosphodiesterase/nucleotide pyrophosphatase |
|
|
|
type I phosphodiesterase/nucleotide pyrophosphatase |
| Desal_3547 |
|
|
|
|
|
|
Gene: Desal_3547: hypothetical protein |
|
|
|
hypothetical protein |
| Desal_3546 |
|
|
|
|
|
|
Gene: Desal_3546: hypothetical protein |
|
|
|
hypothetical protein |
| Desal_3545 |
|
|
|
|
|
|
Gene: Desal_3545: hypothetical protein |
|
|
|
hypothetical protein |
| Ddes_2346 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -62 score = 4.25695 sequence = TCTGGCATCATTAGTGCAA Gene: Ddes_2346: OsmC family protein |
|
|
*2
Desulfovibrio salexigens DSM 2638 Gene: Desal_3544: OsmC family protein Site: position = -67 score = 3.85731 sequence = ATTGGCACGAATAGAGCTT Gene: Desal_3028: OsmC family protein |
|
|
|
OsmC family protein |
| Ddes_2344 |
|
|
|
Gene: Ddes_2344: hypothetical protein |
|
|
Gene: Desal_3543: hypothetical protein |
|
|
|
hypothetical protein |
| Ddes_2349 |
|
|
|
Gene: Ddes_2349: protein of unknown function DUF6 transmembrane |
|
|
Gene: Desal_3542: protein of unknown function DUF6 transmembrane |
|
|
|
protein of unknown function DUF6 transmembrane |
| Desal_3541 |
|
|
|
|
|
|
Gene: Desal_3541: hypothetical protein |
|
|
|
hypothetical protein |
| Ddes_2345 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -151 score = 4.73315 sequence = GTTGGCCTGCCTATTGCAC Gene: Ddes_2345: sigma54 specific transcriptional regulator, Fis family |
|
|
Gene: Desal_3540: sigma54 specific transcriptional regulator, Fis family |
|
|
|
sigma54 specific transcriptional regulator, Fis family |
| Ddes_0151 |
|
|
|
2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2347: dihydrolipoamide dehydrogenase( EC:1.8.1.4 ) Gene: Ddes_0151: dihydrolipoamide dehydrogenase( EC:1.8.1.4 ) |
|
Gene: DESPIG_01045: dihydrolipoamide dehydrogenase( EC:1.8.1.4 ) |
Gene: Desal_3027: dihydrolipoamide dehydrogenase( EC:1.8.1.4 ) |
|
|
|
dihydrolipoamide dehydrogenase( EC:1.8.1.4 ) |
| Ddes_2348 |
|
|
|
2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2348: Glycine cleavage system H protein Gene: Ddes_0152: Glycine cleavage system H protein |
|
|
Gene: Desal_3026: Glycine cleavage system H protein |
|
|
|
Glycine cleavage system H protein |
| Ddes_2350 |
|
|
|
Gene: Ddes_2350: hypothetical protein |
|
|
|
|
|
|
hypothetical protein |
| Ddes_0154 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -244 score = 4.75806 sequence = TTTGGAACAATGTTTGCTA Gene: Ddes_0154: sodium-solute symporter, putative |
|
|
|
|
|
|
sodium-solute symporter, putative |
| Ddes_0153 |
|
|
|
Gene: Ddes_0153: OsmC/Ohr family protein |
|
|
|
|
|
|
OsmC/Ohr family protein |
| CRON 46. | |||||||||||
| DVU0617 |
|
|
|
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -51 score = 5.10699 sequence = TTTGGCACCCCTTATGCTT Gene: Desal_1330: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -60 score = 4.84546 sequence = TCTGGCCCGTTTCCTGCTC Gene: DVU0617: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -29 score = 3.99744 sequence = TATGGCGCGGAAAGTGCTG Gene: DvMF_1509: hypothetical protein |
|
hypothetical protein |
| DVU0616 |
|
|
|
|
|
|
|
Gene: DVU0616: hypothetical protein |
Gene: DvMF_1508: hypothetical protein |
|
hypothetical protein |
| CRON 47. | |||||||||||
| DVU0320 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -308 score = 4.52886 sequence = TACGGCACGGCCGCTGCTC Gene: Dde_0288: hypothetical protein |
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -55 score = 5.06659 sequence = GCTTGCACGCTTCTTGCTT Site: position = -296 score = 4.72618 sequence = AATGGCCCGCGTCTTGCCC Gene: DVU0320: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -59 score = 4.60927 sequence = TTTTGCACGTCACTTGCAT Gene: DvMF_1812: hypothetical protein |
|
hypothetical protein |
| CRON 48. | |||||||||||
| DVU2272 |
|
|
|
|
|
*2
Desulfovibrio piger ATCC 29098 Site: position = -68 score = 5.25435 sequence = TCTGGCACGGTTCCTGCTG Gene: DESPIG_02193: Pyruvate formate-lyase (EC 2.3.1.54) Site: position = -99 score = 5.0608 sequence = TTTGGCACAGCCTATGCTT Gene: DESPIG_02142: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Desulfovibrio salexigens DSM 2638 Site: position = -102 score = 4.88766 sequence = TCTGGCACAGCCCGTGCTA Gene: Desal_3528: Pyruvate formate-lyase (EC 2.3.1.54) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -232 score = 4.52946 sequence = CGTGGCATGGCTTGTGCAG Gene: DVU2272: Pyruvate formate-lyase (EC 2.3.1.54) |
|
|
Pyruvate formate-lyase (EC 2.3.1.54) |
| pflA |
|
|
|
|
|
2
Desulfovibrio piger ATCC 29098 Gene: DESPIG_02194: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Gene: DESPIG_02143: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: Desal_3529: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Gene: DVU2271: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| Desal_3530 |
|
|
|
|
|
|
Gene: Desal_3530: C_GCAxxG_C_C family protein |
Gene: DVU2753: C_GCAxxG_C_C family protein |
|
|
C_GCAxxG_C_C family protein |
| DVU2270 |
|
|
|
|
|
Gene: DESPIG_02144: hypothetical protein |
Gene: Desal_3531: hypothetical protein |
Gene: DVU2270: hypothetical protein |
|
|
hypothetical protein |
| DVU2269 |
|
|
|
|
|
Gene: DESPIG_02145: hypothetical protein |
Gene: Desal_3532: hypothetical protein |
Gene: DVU2269: hypothetical protein |
|
|
hypothetical protein |
| CRON 49. | |||||||||||
| Dbac_2976 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -40 score = 4.41719 sequence = GTTGGCATGAATCTGGCTC Gene: Dbac_2976: OmpA/MotB domain protein |
|
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -77 score = 4.82209 sequence = ATTGGCATTACCCTTGCTT Gene: Desal_2461: OmpA/MotB domain protein |
|
|
|
OmpA/MotB domain protein |
| Dbac_2975 |
|
Gene: Dbac_2975: MotA/TolQ/ExbB proton channel |
|
|
|
|
Gene: Desal_2460: MotA/TolQ/ExbB proton channel |
|
|
|
MotA/TolQ/ExbB proton channel |
| CRON 50. | |||||||||||
| DVU1276 |
Gene: Dret_1991: Tfp pilus assembly protein ATPase PilM-like protein |
|
|
|
Gene: DMR_06710: Tfp pilus assembly protein ATPase PilM-like protein |
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -70 score = 4.13245 sequence = GGCGGCATCCACCTTGCCC Gene: DVU1276: Tfp pilus assembly protein ATPase PilM-like protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -237 score = 3.90014 sequence = TCCGGCGCATTCCATGCAT Gene: DvMF_1024: Tfp pilus assembly protein ATPase PilM-like protein |
|
Tfp pilus assembly protein ATPase PilM-like protein |
| DVU1275 |
Gene: Dret_1992: hypothetical protein |
|
|
|
Gene: DMR_06720: hypothetical protein |
|
|
Gene: DVU1275: hypothetical protein |
Gene: DvMF_1025: hypothetical protein |
|
hypothetical protein |
| DVU1274 |
Gene: Dret_1993: hypothetical protein |
|
|
|
Gene: DMR_06730: hypothetical protein |
|
|
Gene: DVU1274: hypothetical protein |
Gene: DvMF_1026: hypothetical protein |
|
hypothetical protein |
| DVU1273 |
Gene: Dret_1994: Type IV pilus biogenesis protein PilQ |
|
|
|
Gene: DMR_06740: Type IV pilus biogenesis protein PilQ |
|
|
Gene: DVU1273: Type IV pilus biogenesis protein PilQ |
Gene: DvMF_1027: Type IV pilus biogenesis protein PilQ |
|
Type IV pilus biogenesis protein PilQ |
| gspE |
Gene: Dret_1996: Type IV fimbrial assembly, ATPase PilB |
|
|
|
Gene: DMR_06760: Type IV fimbrial assembly, ATPase PilB |
|
|
Gene: DVU1272: Type IV fimbrial assembly, ATPase PilB |
Gene: DvMF_1028: Type IV fimbrial assembly, ATPase PilB |
|
Type IV fimbrial assembly, ATPase PilB |
| DVU1271 |
Gene: Dret_1997: Type IV fimbrial assembly protein PilC |
|
|
|
Gene: DMR_06770: Type IV fimbrial assembly protein PilC |
|
|
Gene: DVU1271: Type IV fimbrial assembly protein PilC |
Gene: DvMF_1029: Type IV fimbrial assembly protein PilC |
|
Type IV fimbrial assembly protein PilC |
| DvMF_1030 |
|
|
|
|
|
|
|
Gene: DVU4015: Type IV pilin PilA |
Gene: DvMF_1030: Type IV pilin PilA |
|
Type IV pilin PilA |
| pilT-1 |
|
|
|
|
|
|
|
Gene: DVU1270: Twitching motility protein PilT |
Gene: DvMF_1031: Twitching motility protein PilT |
|
Twitching motility protein PilT |
| DVU1269 |
|
|
|
|
|
|
|
Gene: DORF10279: hypothetical protein |
|
|
hypothetical protein |
| DVU1268 |
|
|
|
|
|
|
|
Gene: DVU1268: Type IV pilin PilA |
Gene: DvMF_1032: Type IV pilin PilA |
|
Type IV pilin PilA |
| DVU1267 |
|
|
|
|
|
|
|
Gene: DVU1267: hypothetical protein |
Gene: DvMF_1033: hypothetical protein |
|
hypothetical protein |
| DVU1266 |
|
|
|
|
|
|
|
Gene: DVU1266: hypothetical protein |
Gene: DvMF_1034: hypothetical protein |
|
hypothetical protein |
| DMR_06700 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -259 score = 4.13581 sequence = TTGGGCACGGGTCTTGAAG Gene: DMR_06700: hypothetical protein |
|
|
|
|
|
hypothetical protein |
| DMR_06750 |
Gene: Dret_1995: Peptidoglycan-binding lysin domain protein |
|
|
|
Gene: DMR_06750: Peptidoglycan-binding lysin domain protein |
|
|
|
|
|
Peptidoglycan-binding lysin domain protein |
| DMR_06780 |
|
|
|
|
Gene: DMR_06780: fis family transcriptional regulator |
|
|
|
|
|
fis family transcriptional regulator |
| CRON 51. | |||||||||||
| nrfH |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -191 score = 4.19499 sequence = ACTGGTACGTTTCTTGAAA Gene: Ddes_0082: Cytochrome c nitrite reductase, small subunit NrfH |
|
*
Desulfovibrio piger ATCC 29098 Site: position = -119 score = 5.37602 sequence = ACTGGCACGCCCCTTGCTC Gene: DESPIG_01831: Cytochrome c nitrite reductase, small subunit NrfH |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -196 score = 4.72544 sequence = TTCGGCACGCCTTTTGTAA Gene: DVU0624: Cytochrome c nitrite reductase, small subunit NrfH |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -146 score = 4.12292 sequence = AACGGCACGGGTCTTGAAG Gene: DvMF_1491: Cytochrome c nitrite reductase, small subunit NrfH |
Gene: LI1001: Cytochrome c nitrite reductase, small subunit NrfH |
Cytochrome c nitrite reductase, small subunit NrfH |
| nrfA |
|
|
|
Gene: Ddes_0081: Cytochrome c nitrite reductase, catalytic subunit NrfA |
|
Gene: DESPIG_01830: Cytochrome c nitrite reductase, catalytic subunit NrfA |
|
Gene: DVU0625: Cytochrome c nitrite reductase, catalytic subunit NrfA |
Gene: DvMF_1490: Cytochrome c nitrite reductase, catalytic subunit NrfA |
Gene: LI1002: Cytochrome c nitrite reductase, catalytic subunit NrfA |
Cytochrome c nitrite reductase, catalytic subunit NrfA |
| CRON 52. | |||||||||||
| DMR_42220 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -78 score = 4.98796 sequence = GCCGGCACACCCCTTGCTT Gene: DMR_42220: universal stress protein family |
|
|
Gene: DVU2100: universal stress protein family |
Gene: DvMF_0804: universal stress protein family |
|
universal stress protein family |
| DVU0150 |
|
|
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -115 score = 4.85392 sequence = AATGGCATGGCGATTGCTA Gene: Ddes_1642: hypothetical membrane protein |
Gene: DMR_42230: hypothetical membrane protein |
*
Desulfovibrio piger ATCC 29098 Site: position = -105 score = 5.29589 sequence = ATTGGCACGGGTGTTGCTT Gene: DESPIG_02990: hypothetical membrane protein |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -180 score = 5.32766 sequence = TTTGGCACGGCCATTGCTC Gene: DVU0150: hypothetical membrane protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -197 score = 5.22769 sequence = TTTGGCATGCGGCTTGCTA Gene: DvMF_2341: hypothetical membrane protein |
|
hypothetical membrane protein |
| DVU0149 |
|
|
|
Gene: Ddes_1641: hypothetical membrane protein |
Gene: DMR_42240: hypothetical membrane protein |
Gene: DESPIG_02991: hypothetical membrane protein |
|
Gene: DVU0149: hypothetical membrane protein |
Gene: DvMF_2342: hypothetical membrane protein |
|
hypothetical membrane protein |
| DVU0148 |
|
|
|
Gene: Ddes_1640: lipoprotein, putative |
Gene: DMR_42250: lipoprotein, putative |
Gene: DESPIG_02992: lipoprotein, putative |
|
Gene: DVU0148: lipoprotein, putative |
Gene: DvMF_2343: lipoprotein, putative |
|
lipoprotein, putative |
| DVU0147 |
|
|
|
Gene: Ddes_1639: lipoprotein, putative |
Gene: DMR_42260: lipoprotein, putative |
Gene: DESPIG_02993: lipoprotein, putative |
|
Gene: DVU0147: lipoprotein, putative |
Gene: DvMF_2344: lipoprotein, putative |
|
lipoprotein, putative |
| DVU0146 |
|
|
|
Gene: Ddes_1638: hypothetical protein |
Gene: DMR_42270: hypothetical protein |
Gene: DESPIG_02994: hypothetical protein |
|
Gene: DVU0146: hypothetical protein |
Gene: DvMF_2345: hypothetical protein |
|
hypothetical protein |
| CRON 53. | |||||||||||
| DVUA0032 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -52 score = 4.52555 sequence = AGTGGCACCACCTTTGCCA Gene: Dde_0404: hypothetical protein |
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -76 score = 4.85591 sequence = GTTGGAACAGTCATTGCTT Gene: DVUA0032: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -77 score = 5.24716 sequence = ATTGGCACAGCGCTTGCTT Gene: DvMF_0693: hypothetical protein |
|
hypothetical protein |
| DVUA0031 |
|
|
|
|
|
|
|
Gene: DVUA0031: hypothetical protein |
Gene: DvMF_0694: hypothetical protein |
|
hypothetical protein |
| CRON 54. | |||||||||||
| DVU2896 |
|
Gene: Dbac_3225: Tetratricopeptide domain protein |
*
Desulfovibrio desulfuricans G20 Site: position = -101 score = 4.83223 sequence = CATTGCACGCCTTTTGCAT Gene: Dde_2960: Tetratricopeptide domain protein |
|
Gene: DMR_31680: Tetratricopeptide domain protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -73 score = 3.89263 sequence = GTAGGCAGGAATATTGCAA Gene: Desal_2983: Tetratricopeptide domain protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -13 score = 5.02962 sequence = CATTGCACGGTTCTTGCTT Gene: DVU2896: TPR domain protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -146 score = 4.43248 sequence = CGCTGCACGCTTTTTGCTA Gene: DvMF_1325: Tetratricopeptide domain protein |
Gene: LI1093: Tetratricopeptide domain protein |
Tetratricopeptide domain protein |
| DvMF_1326 |
Gene: Dret_0208: protein of unknown function DUF52 |
Gene: Dbac_3224: protein of unknown function DUF52 |
Gene: Dde_2961: protein of unknown function DUF52 |
Gene: Ddes_1868: protein of unknown function DUF52 |
Gene: DMR_31670: protein of unknown function DUF52 |
Gene: DESPIG_00299: protein of unknown function DUF52 |
Gene: Desal_2982: protein of unknown function DUF52 |
2
Desulfovibrio vulgaris Hildenborough Gene: DVU2897: protein of unknown function DUF52 Gene: DVU2897: Candidate gene for the hypothesized phosphomevalonate decarboxylase; COG1355, Predicted dioxygenase |
Gene: DvMF_1326: protein of unknown function DUF52 |
|
protein of unknown function DUF52 |
| CRON 55. | |||||||||||
| Dbac_2231 |
|
*2
Desulfomicrobium baculatum DSM 4028 Site: position = -63 score = 4.97605 sequence = TTTGGCACGGTCGATGCAT Gene: Dbac_2235: protein of unknown function DUF1555 Site: position = -65 score = 4.95146 sequence = ATTGGCATGGACCATGCTT Gene: Dbac_2231: protein of unknown function DUF1555 |
*3
Desulfovibrio desulfuricans G20 Site: position = -72 score = 4.94471 sequence = TTTGGAACCGCTATTGCTT Gene: Dde_2510: protein of unknown function DUF1555 Site: position = -76 score = 5.09337 sequence = CATGGAACGCTGTTTGCTT Gene: Dde_2509: protein of unknown function DUF1555 Site: position = -73 score = 4.62449 sequence = ACAGGCACGGCGATTGCTT Gene: Dde_2507: protein of unknown function DUF1555 |
|
|
|
|
|
|
|
protein of unknown function DUF1555 |
| CRON 56. | |||||||||||
| DVU0805 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -58 score = 4.55172 sequence = TTTGGTACGCCTTTTGTAG Gene: Dde_1017: hypothetical protein |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -69 score = 4.74305 sequence = ACTGGCACGATTTTGGCTT Gene: Desal_3705: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -59 score = 3.88473 sequence = GATGGTATGATATTTGATA Gene: DVU0805: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -63 score = 3.89253 sequence = TGCGGTACGACTTTTGATA Gene: DvMF_2842: hypothetical protein |
|
hypothetical protein |
| DVU0806 |
|
Gene: Dbac_0418: response regulator receiver protein |
Gene: Dde_1018: response regulator receiver protein |
|
|
|
|
Gene: DVU0806: response regulator receiver protein |
Gene: DvMF_2841: response regulator receiver protein |
|
response regulator receiver protein |
| CRON 57. | |||||||||||
| DvMF_0825 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -62 score = 5.29797 sequence = CCTGGCACGGCCCTTGCCT Gene: Dbac_2944: hypothetical protein |
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -110 score = 5.13608 sequence = ATTGGCACGACCTTTGCCT Gene: Ddes_0767: hypothetical protein |
|
|
|
|
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -135 score = 4.85227 sequence = GCTGGCACGACTCCTGCCT Gene: DvMF_0825: hypothetical protein |
|
hypothetical protein |
| CRON 58. | |||||||||||
| DVU1805 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -62 score = 4.35245 sequence = CTTGGCAACAAACTTGCTA Gene: Dbac_1721: GGDEF domain protein |
*
Desulfovibrio desulfuricans G20 Site: position = -70 score = 3.70164 sequence = CACGGCGCAAAGGTTGCAT Gene: Dde_1834: GGDEF domain protein |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 4.30905 sequence = AGTGGCCCTTTTTTTGCAA Gene: Desal_3710: GGDEF domain protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -69 score = 5.01257 sequence = AATGGCCCGCATATTGCTT Gene: DVU1805: GGDEF domain protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -128 score = 4.63051 sequence = CATGGACCAATTCTTGCTT Gene: DvMF_0509: GGDEF domain protein |
|
GGDEF domain protein |
| CRON 59. | |||||||||||
| fliC |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -64 score = 3.75206 sequence = CAAGGCCCGCAAACTGCTC Gene: Dbac_2385: flagellin domain protein |
|
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -58 score = 4.57478 sequence = TTTGGCACATGGATTGCAA Gene: Ddes_1028: flagellin domain protein |
*
Desulfovibrio magneticus RS-1 Site: position = -161 score = 3.83662 sequence = TTAGGTATGTAAATTGCTA Gene: DMR_10270: flagellin domain protein |
|
|
|
|
|
flagellin domain protein |
| CRON 60. | |||||||||||
| DVU0139 |
|
Gene: Dbac_2633: histidine kinase |
*
Desulfovibrio desulfuricans G20 Site: position = -71 score = 4.04296 sequence = ACAGGCACACCCCGTGCAC Gene: Dde_0696: Signal transduction histidine kinase |
|
Gene: DMR_03900: integral membrane sensor signal transduction histidine kinase |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -88 score = 4.96908 sequence = TGTGGCACAGCGTTTGCTC Gene: Desal_2196: integral membrane sensor signal transduction histidine kinase |
*
Desulfovibrio vulgaris Hildenborough Site: position = -79 score = 4.78504 sequence = AATGGTACGCTGTTTGCTC Gene: DVU0139: integral membrane sensor signal transduction histidine kinase |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -57 score = 3.37605 sequence = GGCGGCATCATGTCTGTTC Gene: DvMF_2333: integral membrane sensor signal transduction histidine kinase |
|
integral membrane sensor signal transduction histidine kinase |
| Dbac_0313 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -85 score = 4.93368 sequence = GTTGGCATGTGCGTTGCTT Gene: Dbac_0313: response regulator receiver protein |
Gene: Dde_0695: Putative two-component system response regulator |
|
|
|
Gene: Desal_2195: response regulator receiver protein |
|
|
|
response regulator receiver protein |
| DVU0140 |
|
|
|
|
Gene: DMR_03910: response regulator receiver protein |
|
Gene: Desal_2194: response regulator receiver protein |
Gene: DVU0140: response regulator receiver protein |
Gene: DvMF_2334: response regulator receiver protein |
|
response regulator receiver protein |
| Dbac_0314 |
|
Gene: Dbac_0314: response regulator receiver protein |
|
|
|
|
Gene: Desal_2193: response regulator receiver protein |
|
|
|
response regulator receiver protein |
| DVU0132 |
|
Gene: Dbac_0315: hypothetical membrane protein |
|
Gene: Ddes_0357: hypothetical membrane protein |
Gene: DMR_16160: hypothetical membrane protein |
*
Desulfovibrio piger ATCC 29098 Site: position = -49 score = 5.07127 sequence = AATGGCATGTTTTTTGCTG Gene: DESPIG_02269: hypothetical membrane protein |
Gene: Desal_2192: hypothetical membrane protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -232 score = 5.21295 sequence = TATGGCACACCCGTTGCTT Gene: DVU0132: hypothetical membrane protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -111 score = 4.994 sequence = TTTGGCACAACCGTTGCTA Gene: DvMF_1984: hypothetical membrane protein |
|
hypothetical membrane protein |
| DVU0133 |
|
Gene: Dbac_0316: hypothetical membrane protein |
|
Gene: Ddes_0356: hypothetical membrane protein |
Gene: DMR_16150: hypothetical membrane protein |
Gene: DESPIG_02268: hypothetical membrane protein |
Gene: Desal_2191: hypothetical membrane protein |
Gene: DVU0133: hypothetical membrane protein |
Gene: DvMF_1985: hypothetical membrane protein |
|
hypothetical membrane protein |
| DMR_16170 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = 50 score = 5.31222 sequence = TTTGGCACGGCGTTTGCCT Gene: DMR_16170: putative response regulator receiver protein |
|
|
|
|
|
putative response regulator receiver protein |
| CRON 61. | |||||||||||
| DVU2232 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -55 score = 4.68989 sequence = TCCGGCCTGTATTTTGCTT Gene: Dde_1532: Conserved hypothetical protein |
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -51 score = 4.61204 sequence = AATGGAGCGTTTCTTGCTT Gene: DVU2232: Conserved hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -48 score = 5.22311 sequence = CATGGCATGCTTCCTGCTT Gene: DvMF_0828: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| CRON 62. | |||||||||||
| DVU0750 |
|
|
|
|
Gene: DMR_07950: methyl-accepting chemotaxis protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -59 score = 4.6287 sequence = CATGGCACCAATTATGCTT Gene: Desal_2292: methyl-accepting chemotaxis protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -201 score = 4.88756 sequence = AATGGCACTGCTCTTGCTG Gene: DVU0750: methyl-accepting chemotaxis protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -63 score = 5.32208 sequence = CATGGCACGGCCCTTGCTG Gene: DvMF_2785: methyl-accepting chemotaxis protein |
|
methyl-accepting chemotaxis protein |
| CRON 63. | |||||||||||
| DVU0123 |
|
|
|
|
|
Gene: DESPIG_02810: membrane protein, putative |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -54 score = 4.6978 sequence = CATGGCACTCCATTTGCTC Gene: DVU0123: membrane protein, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -53 score = 4.88276 sequence = TCTGGCATCACTCTTGCCT Gene: DvMF_1255: membrane protein, putative |
|
membrane protein, putative |
| DVU0122 |
|
|
|
|
|
|
|
Gene: DVU0122: hypothetical protein |
Gene: DvMF_1256: hypothetical protein |
|
hypothetical protein |
| DVU0121 |
|
|
|
|
|
Gene: DESPIG_02809: conserved hypothetical protein |
|
Gene: DVU0121: conserved hypothetical protein |
Gene: DvMF_1257: conserved hypothetical protein |
|
conserved hypothetical protein |
| CRON 64. | |||||||||||
| DVU3003 |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -220 score = 4.94765 sequence = GTTGGCACGGATAGTGCTT Gene: DVU3003: radical SAM domain protein |
|
|
radical SAM domain protein |
| DVU3002 |
Gene: Dret_0617: Methyltransferase type 12 |
|
*
Desulfovibrio desulfuricans G20 Site: position = -45 score = 4.40654 sequence = TGTGGCCGGCATTTTGCAC Gene: Dde_0420: Methyltransferase type 12 |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -221 score = 4.33015 sequence = CTCGGCATCGGCATTGCAT Gene: Desal_0577: Methyltransferase type 12 |
Gene: DVU3002: Methyltransferase type 12 |
|
|
Methyltransferase type 12 |
| DVU3001 |
|
|
|
|
|
|
|
Gene: DVU3001: conserved domain protein |
|
|
conserved domain protein |
| DVU3000 |
|
|
|
|
|
|
|
Gene: DVU3000: hypothetical protein |
|
|
hypothetical protein |
| Dde_0419 |
Gene: Dret_0618: Uncharacterized conserved protein |
|
Gene: Dde_0419: Uncharacterized conserved protein |
|
|
|
|
|
|
|
Uncharacterized conserved protein |
| Dde_0418 |
Gene: Dret_0619: phosphoribosylglycinamide synthetase |
|
Gene: Dde_0418: phosphoribosylglycinamide synthetase |
|
Gene: DMR_24600: phosphoribosylglycinamide synthetase |
|
Gene: Desal_0571: phosphoribosylglycinamide synthetase |
|
|
|
phosphoribosylglycinamide synthetase |
| Dbac_0795 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -117 score = 4.99197 sequence = GTTGGCATCCATTTTGCTG Gene: DMR_24580: hypothetical protein |
|
|
|
|
|
Radical SAM domain protein |
| DMR_24590 |
|
|
|
|
Gene: DMR_24590: NeuB family protein |
|
|
|
|
|
NeuB family protein |
| CRON 65. | |||||||||||
| DVU2652 |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -100 score = 4.5456 sequence = AATGGCACAGTGTATGCTC Gene: DVU2652: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -124 score = 4.88973 sequence = AATGGCACGGGCTGTGCTT Gene: DvMF_1121: hypothetical protein |
|
hypothetical protein |
| CRON 66. | |||||||||||
| Dbac_1753 |
|
*2
Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1977: type IV pilus assembly PilZ Site: position = -84 score = 4.52288 sequence = CCCGGCATATATTTTGCTA Gene: Dbac_1753: type IV pilus assembly PilZ |
|
|
|
|
|
|
|
|
type IV pilus assembly PilZ |
| CRON 67. | |||||||||||
| fliC |
|
|
|
|
|
|
|
|
|
*2
Lawsonia intracellularis PHE/MN1-00 Site: position = -56 score = 4.24264 sequence = ATTGGTATATCCATTGCAT Gene: LI0570: Flagellin protein FlaA Gene: LI0710: flagellin |
flagellin |
| CRON 68. | |||||||||||
| kdpF |
|
|
|
|
|
|
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -61 score = 4.17449 sequence = AGTGGCACGTCAAATGCTC Gene: DVU3339.1: K+-transporting ATPase, F subunit |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -132 score = 4.91392 sequence = CTTGGCACGCCGCATGCTC Gene: DvMF_2578: K+-transporting ATPase, F subunit |
|
K+-transporting ATPase, F subunit |
| kdpA |
|
|
|
Gene: Ddes_1677: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
|
Gene: DVU3339: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: DvMF_2577: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpB |
|
|
|
Gene: Ddes_1678: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: DMR_09270: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
Gene: DVU3338: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: DvMF_2576: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpC |
|
|
|
Gene: Ddes_1679: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: DMR_09260: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
Gene: DVU3337: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: DvMF_2575: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpD |
|
|
|
Gene: Ddes_1680: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
Gene: DMR_09250: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
|
Gene: DVU3336: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
Gene: DvMF_2574: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
| DVU3335 |
|
|
|
|
|
|
|
Gene: DVU3335: PAS/PAC sensor signal transduction histidine kinase |
Gene: DvMF_2573: PAS/PAC sensor signal transduction histidine kinase |
|
PAS/PAC sensor signal transduction histidine kinase |
| DVU3334 |
|
|
|
|
|
|
|
Gene: DVU3334: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DvMF_2572: two component, sigma54 specific, transcriptional regulator, Fis family |
|
two component, sigma54 specific, transcriptional regulator, Fis family |
| CRON 69. | |||||||||||
| nifA-2 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -29 score = 4.66373 sequence = TGCGGCATCCTTGTTGCTT Gene: Dbac_0594: transcriptional regulator, NifA subfamily, Fis Family |
|
|
Gene: DMR_26510: transcriptional regulator, NifA subfamily, Fis Family |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -29 score = 4.81959 sequence = GCTGGCACTTACTTTGCTT Gene: Desal_0518: transcriptional regulator, NifA subfamily, Fis Family |
*
Desulfovibrio vulgaris Hildenborough Site: position = -29 score = 4.73844 sequence = CGAGGCACGGCTATTGCTT Gene: DVUA0143: transcriptional regulator, NifA subfamily, Fis Family |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -29 score = 4.01797 sequence = GGCGGAACCATCCTTGCAA Gene: DvMF_2528: transcriptional regulator, NifA subfamily, Fis Family |
|
transcriptional regulator, NifA subfamily, Fis Family |
| CRON 70. | |||||||||||
| fliC |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -70 score = 5.1618 sequence = TTTGGAACGCCTCCTGCTT Gene: DMR_13760: flagellin |
|
|
|
|
|
flagellin |
| CRON 71. | |||||||||||
| flaB1 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -53 score = 4.09414 sequence = AATGGCATTCTGTGTGCAA Gene: Dbac_2430: Flagellin (flaB1) |
*
Desulfovibrio desulfuricans G20 Site: position = -53 score = 5.09309 sequence = TTTGGCACCACCTTTGCTC Gene: Dde_1709: Flagellin (flaB1) |
|
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -69 score = 5.06245 sequence = TTTGGCACACGCTCTGCTT Gene: Desal_3004: Flagellin (flaB1) |
*
Desulfovibrio vulgaris Hildenborough Site: position = -54 score = 4.85648 sequence = ATTGGCATCGTGTTTGCTG Gene: DVU1441: Flagellin (flaB1) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -54 score = 4.8699 sequence = GTTGGCACCAACATTGCTT Gene: DvMF_0244: Flagellin (flaB1) |
|
Flagellin (flaB1) |
| CRON 72. | |||||||||||
| Dbac_2145 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -84 score = 4.97996 sequence = TATGGCATGCCATCTGCTT Gene: Dbac_2145: Formate C-acetyltransferase |
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Formate C-acetyltransferase |
| Dbac_2144 |
|
Gene: Dbac_2144: glycyl-radical enzyme activating protein family |
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glycyl-radical enzyme activating protein family |
| Dbac_2143 |
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Gene: Dbac_2143: PAS modulated sigma54 specific transcriptional regulator, Fis family |
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PAS modulated sigma54 specific transcriptional regulator, Fis family |
| CRON 73. | |||||||||||
| Dde_3211 |
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*
Desulfovibrio desulfuricans G20 Site: position = -88 score = 4.94064 sequence = GCTGGCACGCACGTTGCAC Gene: Dde_3211: Split-Soret cytochrome c |
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Split-Soret cytochrome c |
| CRON 74. | |||||||||||
| DVUA0089 |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -51 score = 4.87403 sequence = TATGGAATGCAATTTGCTT Gene: DVUA0089: hypothetical protein |
|
|
hypothetical protein |
| CRON 75. | |||||||||||
| Dbac_2236 |
|
*4
Desulfomicrobium baculatum DSM 4028 Site: position = -115 score = 4.62376 sequence = GCTGGTACGTTCGTTGCTA Gene: Dbac_2236: type IV pilus assembly PilZ Gene: Dbac_2577: type IV pilus assembly PilZ Gene: Dbac_0922: type IV pilus assembly PilZ Gene: Dbac_0173: type IV pilus assembly PilZ |
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type IV pilus assembly PilZ |
| CRON 76. | |||||||||||
| DvMF_3023 |
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*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -152 score = 4.2276 sequence = AATGGCCTGAATGATGCTT Gene: DvMF_3023: Ammonium transporter |
|
Ammonium transporter |
| DvMF_3024 |
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Gene: DMR_12620: Nitrogen regulatory protein P-II |
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Gene: DvMF_3024: Nitrogen regulatory protein P-II |
|
Nitrogen regulatory protein P-II |
| CRON 77. | |||||||||||
| fliF |
*
Desulfohalobium retbaense DSM 5692 Site: position = -290 score = 4.48205 sequence = ATTGGAGCACTTTTTGCTC Site: position = -130 score = 4.69657 sequence = TATGGCGTGGTATTTGCAT Gene: Dret_0569: Flagellar M-ring protein FliF |
Gene: Dbac_3029: Flagellar M-ring protein FliF |
Gene: Dde_0353: Flagellar M-ring protein FliF |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -79 score = 4.5447 sequence = TTAGGCATGAATGTTGCTA Gene: Ddes_1573: Flagellar M-ring protein FliF |
Gene: DMR_45050: Flagellar M-ring protein FliF |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -50 score = 4.80686 sequence = AATGGCCCACCATTTGCTT Gene: Desal_1153: Flagellar M-ring protein FliF |
Gene: DVU0313: Flagellar M-ring protein FliF |
Gene: DvMF_2287: Flagellar M-ring protein FliF |
Gene: LI0857: Flagellar M-ring protein FliF |
Flagellar M-ring protein FliF |
| fliG |
Gene: Dret_0570: Flagellar motor switch protein FliG |
Gene: Dbac_3030: Flagellar motor switch protein FliG |
Gene: Dde_0352: Flagellar motor switch protein FliG |
Gene: Ddes_1571: Flagellar motor switch protein FliG |
Gene: DMR_45060: Flagellar motor switch protein FliG |
|
Gene: Desal_1152: Flagellar motor switch protein FliG |
Gene: DVU0312: Flagellar motor switch protein FliG |
Gene: DvMF_2288: Flagellar motor switch protein FliG |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -108 score = 4.37025 sequence = ATAGGCATGCAGATTGCAT Gene: LI0856: Flagellar motor switch protein FliG |
Flagellar motor switch protein FliG |
| fliH |
Gene: Dret_0571: Flagellar assembly protein FliH |
Gene: Dbac_3031: Flagellar assembly protein FliH |
Gene: Dde_0351: Flagellar assembly protein FliH |
Gene: Ddes_1570: Flagellar assembly protein FliH |
Gene: DMR_45070: Flagellar assembly protein FliH |
|
Gene: Desal_1151: Flagellar assembly protein FliH |
Gene: DVU0311: Flagellar assembly protein FliH |
Gene: DvMF_2289: Flagellar assembly protein FliH |
Gene: LI0855: Flagellar assembly protein FliH |
Flagellar assembly protein FliH |
| fliI |
Gene: Dret_0572: flagellar protein export ATPase FliI |
Gene: Dbac_3032: flagellar protein export ATPase FliI |
Gene: Dde_0350: flagellar protein export ATPase FliI |
Gene: Ddes_1569: flagellar protein export ATPase FliI |
Gene: DMR_45080: flagellar protein export ATPase FliI |
|
Gene: Desal_1150: flagellar protein export ATPase FliI |
Gene: DVU0310: flagellar protein export ATPase FliI |
Gene: DvMF_2290: flagellar protein export ATPase FliI |
Gene: LI0854: flagellar protein export ATPase FliI |
flagellar protein export ATPase FliI |
| fliJ |
Gene: Dret_0573: Flagellar biosynthesis chaperone FliJ |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -29 score = 4.51227 sequence = TTGTGCACGCTTTTTGCTA Gene: Dbac_2249: Flagellar biosynthesis chaperone FliJ |
*
Desulfovibrio desulfuricans G20 Site: position = -112 score = 5.10076 sequence = TCTGGCCTGATCTTTGCTT Gene: Dde_2705: Flagellar biosynthesis chaperone FliJ |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -119 score = 3.9483 sequence = CGTGGCATGGTGGCTGCGC Site: position = -63 score = 4.9531 sequence = CTTGGCCCGCTGTTTGCAC Gene: Ddes_0698: Flagellar biosynthesis chaperone FliJ |
*
Desulfovibrio magneticus RS-1 Site: position = -58 score = 4.74367 sequence = ACTGGCCCGTGTCTTGCAA Gene: DMR_42100: Flagellar biosynthesis chaperone FliJ |
|
Gene: Desal_0244: Flagellar biosynthesis chaperone FliJ |
*
Desulfovibrio vulgaris Hildenborough Site: position = -72 score = 4.61576 sequence = AACGGCCCGTTCCTTGCTA Gene: DVU0913: Flagellar biosynthesis chaperone FliJ |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -93 score = 4.80653 sequence = TTCGGCCCGGTATTTGCTA Gene: DvMF_1393: Flagellar biosynthesis chaperone FliJ |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -73 score = 4.28147 sequence = TTAGGAATATTTTTTGCAT Gene: LI1060: Flagellar biosynthesis chaperone FliJ |
Flagellar biosynthesis chaperone FliJ |
| flbB |
Gene: Dret_0574: Flagellar protein FlbB |
Gene: Dbac_2250: Flagellar protein FlbB |
Gene: Dde_2706: Flagellar protein FlbB |
Gene: Ddes_0697: Flagellar protein FlbB |
Gene: DMR_42090: Flagellar protein FlbB |
|
Gene: Desal_0245: Flagellar protein FlbB |
Gene: DVU0912: Flagellar protein FlbB |
Gene: DvMF_1394: Flagellar protein FlbB |
Gene: LI1061: Flagellar protein FlbB |
Flagellar protein FlbB |
| fliK |
Gene: Dret_0575: flagellar hook-length control protein |
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flagellar hook-length control protein |
| flgD |
Gene: Dret_0576: flagellar hook capping protein |
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flagellar hook capping protein |
| flgE |
Gene: Dret_0577: fagellar hook-basal body protein |
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fagellar hook-basal body protein |
| flgB |
*
Desulfohalobium retbaense DSM 5692 Site: position = -159 score = 3.54567 sequence = TAGGGCTCAGGTGTTGCCT Gene: Dret_0653: Flagellar basal-body rod protein FlgB |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -91 score = 4.70887 sequence = TCTGGAATGGTCATTGCAA Gene: Dbac_3026: Flagellar basal-body rod protein FlgB |
*
Desulfovibrio desulfuricans G20 Site: position = -75 score = 4.91733 sequence = CATGGAACACACCTTGCTT Gene: Dde_0356: Flagellar basal-body rod protein FlgB |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -59 score = 4.75908 sequence = TTTGGAACAAATGTTGCTT Gene: Ddes_1576: Flagellar basal-body rod protein FlgB |
*
Desulfovibrio magneticus RS-1 Site: position = -82 score = 4.85967 sequence = GCTGGAACGCTTTTTGCCC Gene: DMR_45020: Flagellar basal-body rod protein FlgB |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -96 score = 4.86713 sequence = AATGGAACACCTTTTGCTA Gene: Desal_1156: Flagellar basal-body rod protein FlgB |
*
Desulfovibrio vulgaris Hildenborough Site: position = -91 score = 4.92252 sequence = CGTGGAACCCTTTTTGCTT Gene: DVU0316: Flagellar basal-body rod protein FlgB |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -106 score = 4.84928 sequence = GCTGGAACACCTCTTGCTG Gene: DvMF_2284: Flagellar basal-body rod protein FlgB |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -68 score = 5.01605 sequence = TATGGCATATGTTTTGCTT Gene: LI0860: Flagellar basal-body rod protein FlgB |
Flagellar basal-body rod protein FlgB |
| flgC |
Gene: Dret_0654: Flagellar basal-body rod protein FlgC |
Gene: Dbac_3027: Flagellar basal-body rod protein FlgC |
Gene: Dde_0355: Flagellar basal-body rod protein FlgC |
Gene: Ddes_1575: Flagellar basal-body rod protein FlgC |
Gene: DMR_45030: Flagellar basal-body rod protein FlgC |
|
Gene: Desal_1155: Flagellar basal-body rod protein FlgC |
Gene: DVU0315: Flagellar basal-body rod protein FlgC |
Gene: DvMF_2285: Flagellar basal-body rod protein FlgC |
Gene: LI0859: Flagellar basal-body rod protein FlgC |
Flagellar basal-body rod protein FlgC |
| fliE |
Gene: Dret_0655: Flagellar hook-basal body complex protein FliE |
Gene: Dbac_3028: Flagellar hook-basal body complex protein FliE |
Gene: Dde_0354: Flagellar hook-basal body complex protein FliE |
Gene: Ddes_1574: Flagellar hook-basal body complex protein FliE |
Gene: DMR_45040: Flagellar hook-basal body complex protein FliE |
|
Gene: Desal_1154: Flagellar hook-basal body complex protein FliE |
Gene: DVU0314: Flagellar hook-basal body complex protein FliE |
Gene: DvMF_2286: Flagellar hook-basal body complex protein FliE |
Gene: LI0858: Flagellar hook-basal body complex protein FliE |
Flagellar hook-basal body complex protein FliE |
| truA |
Gene: Dret_2111: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: Dbac_2251: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: Dde_2707: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: Ddes_0696: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: DMR_42080: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: DESPIG_02979: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: Desal_0246: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: DVU0911: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: DvMF_1395: tRNA pseudouridine synthase A (EC 4.2.1.70) |
Gene: LI1062: tRNA pseudouridine synthase A (EC 4.2.1.70) |
tRNA pseudouridine synthase A (EC 4.2.1.70) |
| Dbac_2252 |
|
Gene: Dbac_2252: Flagellin, putative |
Gene: Dde_3018: Flagellin, putative |
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Gene: DMR_31110: Flagellin, putative |
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Gene: DVU2948: Flagellin, putative |
Gene: DvMF_1474: Flagellin, putative |
|
Flagellin, putative |
| CRON 78. | |||||||||||
| DVU2090 |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -96 score = 4.30276 sequence = CAAGGTACACACCTTGCTT Gene: DVU2090: EF hand domain protein |
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EF hand domain protein |
| CRON 79. | |||||||||||
| DVU1962 |
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Gene: Dde_1627: Methyl-accepting chemotaxis protein McpC, putative |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -317 score = 5.42398 sequence = TTTGGCCTGCCTCTTGCTT Gene: DVU1962: Methyl-accepting chemotaxis protein McpC, putative |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -252 score = 4.45266 sequence = CCCGGCGTGCTTCTTGCAA Gene: DvMF_0621: Methyl-accepting chemotaxis protein McpC, putative |
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Methyl-accepting chemotaxis protein McpC, putative |
| cheW-3 |
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Gene: DMR_42560: chemotaxis protein CheW |
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Gene: DVU1961: chemotaxis protein CheW |
Gene: DvMF_0620: chemotaxis protein CheW |
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chemotaxis protein CheW |
| cheA-2 |
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Gene: DVU1960: Signal transduction histidine kinase CheA (EC 2.7.3.-) |
Gene: DvMF_0619: Signal transduction histidine kinase CheA (EC 2.7.3.-) |
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Signal transduction histidine kinase CheA (EC 2.7.3.-) |
| CRON 80. | |||||||||||
| DVU2357 |
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Gene: Dbac_3068: metal dependent phosphohydrolase |
*
Desulfovibrio desulfuricans G20 Site: position = -212 score = 5.06449 sequence = CTTGGCATGCATTGTGCTT Gene: Dde_1400: metal dependent phosphohydrolase |
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*
Desulfovibrio vulgaris Hildenborough Site: position = -430 score = 5.45382 sequence = CTTGGCACACCCCTTGCTT Gene: DVU2357: metal dependent phosphohydrolase |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -400 score = 5.13362 sequence = TCTGGCACGGGTTGTGCTT Gene: DvMF_3011: metal dependent phosphohydrolase |
|
metal dependent phosphohydrolase |
| CRON 81. | |||||||||||
| DVU2116 |
2
Desulfohalobium retbaense DSM 5692 Gene: Dret_1171: Flp/Fap pilin component family protein Gene: Dret_1172: Flp/Fap pilin component family protein |
|
*
Desulfovibrio desulfuricans G20 Site: position = -82 score = 5.05054 sequence = CTTGGCACGGTGGTTGCCT Gene: Dde_2357: Flp/Fap pilin component family protein |
|
*5
Desulfovibrio magneticus RS-1 Site: position = -79 score = 5.45187 sequence = TTTGGCACGCCCCCTGCTT Gene: DMR_06380: Flp/Fap pilin component family protein Site: position = -79 score = 5.17717 sequence = CTTGGCACGGCCTATGCTT Gene: DMR_06420: Flp/Fap pilin component family protein Site: position = -78 score = 5.45187 sequence = TTTGGCACGCCCCCTGCTT Gene: DMR_06400: Flp/Fap pilin component family protein Site: position = -79 score = 5.45187 sequence = TTTGGCACGCCCCCTGCTT Gene: DMR_06410: Flp/Fap pilin component family protein Site: position = -78 score = 5.30726 sequence = TTTGGCATGCCCCCTGCTT Gene: DMR_06390: Flp/Fap pilin component family protein |
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*2
Desulfovibrio vulgaris Hildenborough Site: position = -78 score = 4.73121 sequence = TTTGGCATGAGGGTTGCTC Gene: DORF39640: Flp pilus assembly protein, pilin Flp Gene: DVU2116: Flp pilus assembly protein, pilin Flp |
*4
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2746: Flp pilus assembly protein, pilin Flp Site: position = -79 score = 4.9376 sequence = CTTGGCACGCGGGTTGCTG Gene: DvMF_2747: Flp pilus assembly protein, pilin Flp Gene: DvMF_2745: Flp pilus assembly protein, pilin Flp Gene: DvMF_2744: Flp pilus assembly protein, pilin Flp |
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Flp/Fap pilin component family protein |
| cpaA |
Gene: Dret_1170: Type IV prepilin peptidase TadV/CpaA |
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Gene: Dde_2358: Type IV prepilin peptidase TadV/CpaA |
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Gene: DMR_35040: Type IV prepilin peptidase TadV/CpaA |
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Gene: DVU2117: Type IV prepilin peptidase TadV/CpaA |
Gene: DvMF_2743: Type IV prepilin peptidase TadV/CpaA |
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Type IV prepilin peptidase TadV/CpaA |
| cpaB |
Gene: Dret_1168: Flp pilus assembly protein CpaB |
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Gene: Dde_2359: Flp pilus assembly protein CpaB |
|
*
Desulfovibrio magneticus RS-1 Site: position = -246 score = 5.09072 sequence = CTTGGCAGGCTTCTTGCTC Gene: DMR_33860: Flp pilus assembly protein CpaB |
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Gene: DVU2118: Flp pilus assembly protein RcpC/CpaB |
Gene: DvMF_2742: Flp pilus assembly protein RcpC/CpaB |
|
Flp pilus assembly protein CpaB |
| cpaC |
Gene: Dret_1167: Pilus assembly protein CpaC (cpaC) |
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Gene: Dde_2360: Pilus assembly protein CpaC (cpaC) |
|
Gene: DMR_33850: Pilus assembly protein CpaC (cpaC) |
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Gene: DVU2119: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly |
Gene: DvMF_2741: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly |
|
Pilus assembly protein CpaC (cpaC) |
| DVU2120 |
|
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Gene: Dde_2361: hypothetical protein |
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Gene: DMR_33840: hypothetical protein |
|
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Gene: DVU2120: hypothetical protein |
Gene: DvMF_2740: hypothetical protein |
|
hypothetical protein |
| DVU2121 |
Gene: Dret_1162: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
|
Gene: Dde_2362: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
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Gene: DMR_33830: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
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Gene: DVU2121: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
Gene: DvMF_2739: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
|
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly |
| cpaF |
Gene: Dret_1161: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
|
Gene: Dde_2363: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
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Gene: DMR_33820: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
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Gene: DVU2122: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
Gene: DvMF_2738: type II/IV secretion system protein |
|
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily |
| DVU2123 |
Gene: Dret_1160: Flp pilus assembly protein TadB |
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Gene: Dde_2364: Flp pilus assembly protein TadB |
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Gene: DMR_33810: Flp pilus assembly protein TadB |
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Gene: DVU2123: Flp pilus assembly protein TadB |
Gene: DvMF_2737: Flp pilus assembly protein TadB |
|
Flp pilus assembly protein TadB |
| DVU2124 |
Gene: Dret_1159: Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
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Gene: Dde_2365: Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
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Gene: DMR_33800: Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
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Gene: DVU2124: Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
Gene: DvMF_2736: Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
|
Type II/IV secretion system protein TadC, associated with Flp pilus assembly |
| DVU2125 |
Gene: Dret_1158: Flp pilus assembly protein TadD, contains TPR repeat |
|
Gene: Dde_2366: Flp pilus assembly protein TadD, contains TPR repeat |
|
Gene: DMR_33740: Flp pilus assembly protein TadD, contains TPR repeat |
|
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Gene: DVU2125: Flp pilus assembly protein TadD, contains TPR repeat |
Gene: DvMF_2735: Flp pilus assembly protein TadD, contains TPR repeat |
|
Flp pilus assembly protein TadD, contains TPR repeat |
| DVU2126 |
|
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Gene: Dde_2367: hypothetical protein |
|
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Gene: DVU2126: hypothetical protein |
Gene: DvMF_2734: hypothetical protein |
|
hypothetical protein |
| DVU2127 |
|
|
Gene: Dde_2368: Von Willebrand factor type A domain protein, associated with Flp pilus assembly |
|
Gene: DMR_33760: Von Willebrand factor type A domain protein, associated with Flp pilus assembly |
|
|
Gene: DVU2127: Von Willebrand factor type A domain protein, associated with Flp pilus assembly |
Gene: DvMF_2733: Von Willebrand factor type A domain protein, associated with Flp pilus assembly |
|
Von Willebrand factor type A domain protein, associated with Flp pilus assembly |
| DVU2128 |
|
|
Gene: Dde_2369: Similar to TadZ/CpaE, associated with Flp pilus assembly |
|
Gene: DMR_33770: Similar to TadZ/CpaE, associated with Flp pilus assembly |
|
|
Gene: DVU2128: Similar to TadZ/CpaE, associated with Flp pilus assembly |
Gene: DvMF_2732: Similar to TadZ/CpaE, associated with Flp pilus assembly |
|
Similar to TadZ/CpaE, associated with Flp pilus assembly |
| DVU2129 |
|
|
Gene: Dde_2370: PAS/PAC sensor hybrid histidine kinase |
|
Gene: DMR_33730: PAS/PAC sensor hybrid histidine kinase |
|
|
Gene: DVU2129: sensory box histidine kinase/response regulator |
Gene: DvMF_2731: multi-sensor hybrid histidine kinase |
|
PAS/PAC sensor hybrid histidine kinase |
| CRON 82. | |||||||||||
| DVU1880 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -87 score = 4.7716 sequence = GGTGGCATGCTTTATGCTC Gene: Dde_1654: hypothetical protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -66 score = 4.44582 sequence = TATGGACCATATTTTGCAT Gene: Ddes_1559: hypothetical protein |
|
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -65 score = 4.02343 sequence = TCAGGCATAATTACTGCAT Gene: Desal_3185: hypothetical protein |
*
Desulfovibrio vulgaris Hildenborough Site: position = -68 score = 4.9738 sequence = ATTGGCATGATTCATGCTT Gene: DVU1880: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -68 score = 4.43524 sequence = GCTGGCATGGGCGATGCAT Gene: DvMF_0574: hypothetical protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -60 score = 3.50838 sequence = AATAGTATGAATATTGCAT Gene: LI0899: hypothetical protein |
hypothetical protein |
| CRON 83. | |||||||||||
| motA |
*
Desulfohalobium retbaense DSM 5692 Site: position = -51 score = 4.54449 sequence = GCTGGCATAATTTATGCTA Gene: Dret_0578: Flagellar motor rotation protein MotA |
Gene: Dbac_2738: Flagellar motor rotation protein MotA |
Gene: Dde_3589: Flagellar motor rotation protein MotA |
|
|
|
Gene: Desal_3811: Flagellar motor rotation protein MotA |
Gene: DVU0050: Flagellar motor rotation protein MotA |
Gene: DvMF_2209: Flagellar motor rotation protein MotA |
|
Flagellar motor rotation protein MotA |
| motB |
Gene: Dret_0579: Flagellar motor rotation protein MotB |
Gene: Dbac_2737: Flagellar motor rotation protein MotB |
Gene: Dde_3588: Flagellar motor rotation protein MotB |
|
|
|
Gene: Desal_3812: Flagellar motor rotation protein MotB |
Gene: DVU0049: Flagellar motor rotation protein MotB |
Gene: DvMF_2210: Flagellar motor rotation protein MotB |
|
Flagellar motor rotation protein MotB |
| fliL |
Gene: Dret_0580: Flagellar basal body-associated protein FliL |
Gene: Dbac_2735: Flagellar basal body-associated protein FliL |
Gene: Dde_3586: Flagellar basal body-associated protein FliL |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -141 score = 4.74387 sequence = TCTGGCACAGTGTCTGCAA Gene: Ddes_0373: Flagellar basal body-associated protein FliL |
3
Desulfovibrio magneticus RS-1 Gene: DMR_33940: Flagellar basal body-associated protein FliL Gene: DMR_26920: Flagellar basal body-associated protein FliL Gene: DMR_46170: Flagellar basal body-associated protein FliL |
|
Gene: Desal_3814: Flagellar basal body-associated protein FliL |
*
Desulfovibrio vulgaris Hildenborough Site: position = -186 score = 4.30333 sequence = GCTGGAACATTTTCTGCAA Gene: DVU0047: Flagellar basal body-associated protein FliL |
Gene: DvMF_2212: Flagellar basal body-associated protein FliL |
Gene: LI0642: Flagellar basal body-associated protein FliL |
Flagellar basal body-associated protein FliL |
| fliM |
Gene: Dret_0581: Flagellar motor switch protein FliM |
Gene: Dbac_2734: Flagellar motor switch protein FliM |
*
Desulfovibrio desulfuricans G20 Site: position = -136 score = 4.11332 sequence = AATGGCATTTATTATGCAT Gene: Dde_2708: Flagellar motor switch protein FliM |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -78 score = 4.42237 sequence = AATGGCCTTTTTCTTGCAT Gene: Ddes_1836: Flagellar motor switch protein FliM |
Gene: DMR_22580: Flagellar motor switch protein FliM |
*
Desulfovibrio piger ATCC 29098 Site: position = -51 score = 4.83486 sequence = TTTGGCCTTGTTCTTGCAT Gene: DESPIG_02462: Flagellar motor switch protein FliM |
Gene: Desal_3583: Flagellar motor switch protein FliM |
*
Desulfovibrio vulgaris Hildenborough Site: position = -128 score = 4.54262 sequence = ACTGGCCCCTATCTTGCAA Gene: DVU0910: Flagellar motor switch protein FliM |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -237 score = 4.4327 sequence = CTTGGCGTTCATCTTGCAT Gene: DvMF_1396: Flagellar motor switch protein FliM |
Gene: LI0027: Flagellar motor switch protein FliM |
Flagellar motor switch protein FliM |
| fliN |
Gene: Dret_0582: Flagellar motor switch protein FliN |
Gene: Dbac_2733: Flagellar motor switch protein FliN |
Gene: Dde_3585: Flagellar motor switch protein FliN |
Gene: Ddes_0375: Flagellar motor switch protein FliN |
Gene: DMR_46180: Flagellar motor switch protein FliN |
|
Gene: Desal_3815: Flagellar motor switch protein FliN |
Gene: DVU0046: Flagellar motor switch protein FliN |
Gene: DvMF_2213: Flagellar motor switch protein FliN |
Gene: LI0641: Flagellar motor switch protein FliN |
Flagellar motor switch protein FliN |
| fliO |
Gene: Dret_0583: Flagellar biosynthesis protein FliO |
Gene: Dbac_2732: Flagellar biosynthesis protein FliO |
Gene: Dde_3584: Flagellar biosynthesis protein FliO |
Gene: Ddes_0376: Flagellar biosynthesis protein FliO |
Gene: DMR_46190: Flagellar biosynthesis protein FliO |
|
Gene: Desal_3816: Flagellar biosynthesis protein FliO |
Gene: DVU0045: Flagellar biosynthesis protein FliO |
Gene: DvMF_2214: Flagellar biosynthesis protein FliO |
Gene: LI0640: Flagellar biosynthesis protein FliO |
Flagellar biosynthesis protein FliO |
| fliP |
Gene: Dret_0584: Flagellar biosynthesis protein FliP |
Gene: Dbac_2731: Flagellar biosynthesis protein FliP |
Gene: Dde_3583: Flagellar biosynthesis protein FliP |
Gene: Ddes_0377: Flagellar biosynthesis protein FliP |
Gene: DMR_46200: Flagellar biosynthesis protein FliP |
|
Gene: Desal_3817: Flagellar biosynthesis protein FliP |
Gene: DVU0044: Flagellar biosynthesis protein FliP |
Gene: DvMF_2215: Flagellar biosynthesis protein FliP |
Gene: LI0639: Flagellar biosynthesis protein FliP |
Flagellar biosynthesis protein FliP |
| fliQ |
Gene: Dret_0585: Flagellar biosynthesis protein FliQ |
Gene: Dbac_2730: Flagellar biosynthesis protein FliQ |
Gene: Dde_3582: Flagellar biosynthesis protein FliQ |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -71 score = 4.36295 sequence = TCTGGCATCAATCTTGAAT Gene: Ddes_0378: Flagellar biosynthesis protein FliQ |
Gene: DMR_46210: Flagellar biosynthesis protein FliQ |
|
Gene: Desal_3818: Flagellar biosynthesis protein FliQ |
Gene: DVU0043: Flagellar biosynthesis protein FliQ |
Gene: DvMF_2216: Flagellar biosynthesis protein FliQ |
|
Flagellar biosynthesis protein FliQ |
| fliR |
Gene: Dret_0586: Flagellar biosynthesis protein FliR |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -30 score = 4.65638 sequence = TCTGGTCCGCGTTTTGCTG Gene: Dbac_3473: Flagellar biosynthesis protein FliR |
*
Desulfovibrio desulfuricans G20 Site: position = -30 score = 4.57708 sequence = GATGGTCTGTTTTTTGCTT Gene: Dde_0378: Flagellar biosynthesis protein FliR |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -29 score = 4.74889 sequence = TTTGGCAACCATTTTGCAA Gene: Ddes_0193: Flagellar biosynthesis protein FliR |
*
Desulfovibrio magneticus RS-1 Site: position = -29 score = 4.61581 sequence = CTTGGTCCAGCTTTTGCTA Gene: DMR_23860: Flagellar biosynthesis protein FliR |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -41 score = 3.41752 sequence = ATGGGTCCTGATTTTGCAG Gene: Desal_2592: Flagellar biosynthesis protein FliR |
*
Desulfovibrio vulgaris Hildenborough Site: position = -29 score = 4.78229 sequence = CGTGGCCCGTATTTTGCTC Gene: DVU3234: Flagellar biosynthesis protein FliR |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -29 score = 5.07388 sequence = CATGGCCCGCATCTTGCTG Gene: DvMF_2016: Flagellar biosynthesis protein FliR |
Gene: LI0532: Flagellar biosynthesis protein FliR |
Flagellar biosynthesis protein FliR |
| flhB |
Gene: Dret_0587: Flagellar biosynthesis protein FlhB |
Gene: Dbac_3472: Flagellar biosynthesis protein FlhB |
Gene: Dde_0379: Flagellar biosynthesis protein FlhB |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -79 score = 4.54475 sequence = CCGGGTACGCTTCTTGCTA Gene: Ddes_0332: Flagellar biosynthesis protein FlhB |
Gene: DMR_23870: Flagellar biosynthesis protein FlhB |
|
Gene: Desal_2593: Flagellar biosynthesis protein FlhB |
Gene: DVU3233: Flagellar biosynthesis protein FlhB |
Gene: DvMF_2015: Flagellar biosynthesis protein FlhB |
Gene: LI0531: Flagellar biosynthesis protein FlhB |
Flagellar biosynthesis protein FlhB |
| flhA |
Gene: Dret_0588: Flagellar biosynthesis protein FlhA |
Gene: Dbac_3471: Flagellar biosynthesis protein FlhA |
|
Gene: Ddes_0331: Flagellar biosynthesis protein FlhA |
|
|
|
|
|
|
Flagellar biosynthesis protein FlhA |
| flgF |
Gene: Dret_0593: Flagellar basal-body rod protein FlgF |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -46 score = 4.75342 sequence = ACTGGCCTGGTATTTGCTC Gene: Dbac_2410: Flagellar basal-body rod protein FlgF |
*
Desulfovibrio desulfuricans G20 Site: position = -66 score = 4.91392 sequence = GCTGGCCCGCATGTTGCAT Gene: Dde_3159: Flagellar basal-body rod protein FlgF |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -101 score = 5.25425 sequence = TTTGGCCCGCACTTTGCAT Gene: Ddes_0391: Flagellar basal-body rod protein FlgF |
*
Desulfovibrio magneticus RS-1 Site: position = -46 score = 4.78981 sequence = GCTGGCCCGCATGTTGCAA Gene: DMR_31570: Flagellar basal-body rod protein FlgF |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -71 score = 4.98552 sequence = TTTGGCCTGCACTTTGCAA Gene: Desal_1008: Flagellar basal-body rod protein FlgF |
*
Desulfovibrio vulgaris Hildenborough Site: position = -68 score = 4.0816 sequence = CGTGGTCTGCATATTGCAA Gene: DVU0512: Flagellar basal-body rod protein FlgF |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -58 score = 4.45939 sequence = TGTGGCCCATGCCTTGCAA Gene: DvMF_2517: Flagellar basal-body rod protein FlgF |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -147 score = 4.57994 sequence = CTTGGTATAACTTTTGCTA Gene: LI0740: Flagellar basal-body rod protein FlgF |
Flagellar basal-body rod protein FlgF |
| flgG |
Gene: Dret_0594: Flagellar basal-body rod protein FlgG |
Gene: Dbac_2409: Flagellar basal-body rod protein FlgG |
Gene: Dde_3158: Flagellar basal-body rod protein FlgG |
Gene: Ddes_0392: Flagellar basal-body rod protein FlgG |
Gene: DMR_31560: Flagellar basal-body rod protein FlgG |
|
Gene: Desal_1009: Flagellar basal-body rod protein FlgG |
Gene: DVU0513: Flagellar basal-body rod protein FlgG |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -89 score = 4.33509 sequence = TCCGGCATCCGGTTTGCAA Gene: DvMF_2518: Flagellar basal-body rod protein FlgG |
Gene: LI0741: Flagellar basal-body rod protein FlgG |
Flagellar basal-body rod protein FlgG |
| flgA |
Gene: Dret_0595: Flagellar basal-body P-ring formation protein FlgA |
Gene: Dbac_2408: Flagellar basal-body P-ring formation protein FlgA |
Gene: Dde_3157: Flagellar basal-body P-ring formation protein FlgA |
Gene: Ddes_0393: Flagellar basal-body P-ring formation protein FlgA |
Gene: DMR_31550: Flagellar basal-body P-ring formation protein FlgA |
|
Gene: Desal_1010: Flagellar basal-body P-ring formation protein FlgA |
Gene: DVU0514: Flagellar basal-body P-ring formation protein FlgA |
Gene: DvMF_2519: Flagellar basal-body P-ring formation protein FlgA |
Gene: LI0742: Flagellar basal-body P-ring formation protein FlgA |
Flagellar basal-body P-ring formation protein FlgA |
| flgH |
Gene: Dret_0596: Flagellar L-ring protein FlgH |
Gene: Dbac_2407: Flagellar L-ring protein FlgH |
Gene: Dde_3156: Flagellar L-ring protein FlgH |
Gene: Ddes_0394: Flagellar L-ring protein FlgH |
Gene: DMR_31540: Flagellar L-ring protein FlgH |
|
Gene: Desal_1011: Flagellar L-ring protein FlgH |
Gene: DVU0515: Flagellar L-ring protein FlgH |
Gene: DvMF_2520: Flagellar L-ring protein FlgH |
Gene: LI0743: Flagellar L-ring protein FlgH |
Flagellar L-ring protein FlgH |
| flgI |
Gene: Dret_0597: Flagellar P-ring protein FlgI |
Gene: Dbac_2406: Flagellar P-ring protein FlgI |
Gene: Dde_3155: Flagellar P-ring protein FlgI |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -57 score = 4.91078 sequence = TTCGGCACGCTTTCTGCAA Gene: Ddes_2004: Flagellar P-ring protein FlgI |
Gene: DMR_31530: Flagellar P-ring protein FlgI |
|
Gene: Desal_1012: Flagellar P-ring protein FlgI |
Gene: DVU0516: Flagellar P-ring protein FlgI |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -220 score = 4.43421 sequence = ACTGGCACGGTGTTGGCAA Site: position = -150 score = 3.80669 sequence = TGCGGAATGCTTGTTTCTT Gene: DvMF_2521: Flagellar P-ring protein FlgI |
Gene: LI0744: Flagellar P-ring protein FlgI |
Flagellar P-ring protein FlgI |
| flgJ |
Gene: Dret_0598: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Dbac_2405: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Dde_3154: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: Ddes_2003: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
*
Desulfovibrio magneticus RS-1 Site: position = -71 score = 4.71664 sequence = ACTGGCCCGCAATTTGCCT Gene: DMR_31520: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -87 score = 4.294 sequence = GACGGTATGCAATTTGCTT Gene: Desal_1014: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: DVU0517: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: DvMF_2522: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Gene: LI0745: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) |
| DVU0518 |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -106 score = 3.97844 sequence = ACTGGTCGGGATTTTGCAA Gene: Dbac_2404: FlgN family protein |
*
Desulfovibrio desulfuricans G20 Site: position = -164 score = 4.13069 sequence = GCTGGCAGGAAAATTGCTG Gene: Dde_3153: FlgN family protein |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -84 score = 4.40328 sequence = CGAGGCACGGAAATTGCTT Gene: Ddes_2002: FlgN family protein |
Gene: DMR_31510: FlgN family protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -104 score = 4.49461 sequence = ATTGGCAAGAAACTTGCTG Gene: Desal_1015: FlgN family protein |
Gene: DVU0518: FlgN family protein |
Gene: DvMF_2523: FlgN family protein |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -62 score = 3.78989 sequence = TTTGGTATAAAAGCTGCAT Gene: LI0746: FlgN family protein |
FlgN family protein |
| flgK |
Gene: Dret_0602: flagellar hook-associated protein FlgK |
Gene: Dbac_2403: flagellar hook-associated protein FlgK |
Gene: Dde_3152: flagellar hook-associated protein FlgK |
Gene: Ddes_2001: flagellar hook-associated protein FlgK |
Gene: DMR_31500: flagellar hook-associated protein FlgK |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -147 score = 4.57972 sequence = GCTGGCCCAGGCCCTGCTT Gene: Desal_1016: flagellar hook-associated protein FlgK |
Gene: DVU0519: flagellar hook-associated protein FlgK |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -148 score = 4.1369 sequence = CCTGGCCCTGGCCCTGCTG Gene: DvMF_2524: flagellar hook-associated protein FlgK |
Gene: LI0747: flagellar hook-associated protein FlgK |
flagellar hook-associated protein FlgK |
| flgL |
Gene: Dret_0603: Flagellar hook-associated protein FlgL |
Gene: Dbac_2402: Flagellar hook-associated protein FlgL |
Gene: Dde_3151: Flagellar hook-associated protein FlgL |
Gene: Ddes_2000: Flagellar hook-associated protein FlgL |
Gene: DMR_31490: Flagellar hook-associated protein FlgL |
|
Gene: Desal_1017: Flagellar hook-associated protein FlgL |
Gene: DVU0520: Flagellar hook-associated protein FlgL |
Gene: DvMF_2525: Flagellar hook-associated protein FlgL |
Gene: LI0748: Flagellar hook-associated protein FlgL |
Flagellar hook-associated protein FlgL |
| csrA |
Gene: Dret_0604: carbon storage regulator, CsrA |
Gene: Dbac_2401: carbon storage regulator, CsrA |
Gene: Dde_3150: carbon storage regulator, CsrA |
Gene: Ddes_1999: carbon storage regulator, CsrA |
Gene: DMR_31480: carbon storage regulator, CsrA |
|
Gene: Desal_1018: carbon storage regulator, CsrA |
Gene: DVU0521: carbon storage regulator, CsrA |
Gene: DvMF_2526: carbon storage regulator, CsrA |
|
carbon storage regulator, CsrA |
| fliW |
Gene: Dret_0605: Flagellar assembly factor FliW |
Gene: Dbac_2400: Flagellar assembly factor FliW |
Gene: Dde_3149: Flagellar assembly factor FliW |
Gene: Ddes_1998: Flagellar assembly factor FliW |
Gene: DMR_31470: Flagellar assembly factor FliW |
|
Gene: Desal_1019: Flagellar assembly factor FliW |
Gene: DVU0522: Flagellar assembly factor FliW |
Gene: DvMF_2527: Flagellar assembly factor FliW |
Gene: LI0749: Flagellar assembly factor FliW |
Flagellar assembly factor FliW |
| flhF |
*
Desulfohalobium retbaense DSM 5692 Site: position = -92 score = 4.16706 sequence = GACGGAACGGTATTTGCCC Gene: Dret_0589: Flagellar biosynthesis protein FlhF |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -95 score = 4.82704 sequence = CCTGGCCCGTTTTTTGCCA Gene: Dbac_3470: Flagellar biosynthesis protein FlhF |
Gene: Dde_0381: Flagellar biosynthesis protein FlhF |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -96 score = 4.48909 sequence = CTTGGCCCCTAATTTGCAT Gene: Ddes_0327: Flagellar biosynthesis protein FlhF |
Gene: DMR_23890: Flagellar biosynthesis protein FlhF |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -107 score = 4.9522 sequence = GATGGTACGCTTCTTGCCT Gene: Desal_2595: Flagellar biosynthesis protein FlhF |
Gene: DVU3231: Flagellar biosynthesis protein FlhF |
Gene: DvMF_2013: Flagellar biosynthesis protein FlhF |
Gene: LI0529: Flagellar biosynthesis protein FlhF |
Flagellar biosynthesis protein FlhF |
| fleN |
Gene: Dret_0590: Flagellar synthesis regulator FleN |
Gene: Dbac_3469: Flagellar synthesis regulator FleN |
Gene: Dde_0382: Flagellar synthesis regulator FleN |
Gene: Ddes_0326: Flagellar synthesis regulator FleN |
Gene: DMR_23900: Flagellar synthesis regulator FleN |
|
Gene: Desal_2596: Flagellar synthesis regulator FleN |
Gene: DVU3230: Flagellar synthesis regulator FleN |
Gene: DvMF_2012: Flagellar synthesis regulator FleN |
Gene: LI0528: Flagellar synthesis regulator FleN |
Flagellar synthesis regulator FleN |
| fliA |
Gene: Dret_0591: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: Dbac_3468: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: Dde_0383: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: Ddes_0325: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: DMR_23910: RNA polymerase, sigma 28 subunit, FliA/WhiG |
|
Gene: Desal_2597: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: DVU3229: RNA polymerase, sigma 28 subunit, FliA/WhiG |
Gene: DvMF_2011: RNA polymerase, sigma 28 subunit, FliA/WhiG |
|
RNA polymerase, sigma 28 subunit, FliA/WhiG |
| Dret_0592 |
Gene: Dret_0592: methyl-accepting chemotaxis sensory transducer |
|
|
|
|
|
|
|
|
|
methyl-accepting chemotaxis sensory transducer |
| DVUA0106 |
|
|
|
|
|
*
Desulfovibrio piger ATCC 29098 Site: position = -73 score = 4.487 sequence = TGTGGCATGATTCTGGCAT Gene: DESPIG_00689: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -257 score = 4.51052 sequence = TCTGGCCCGCTTTTCGCAA Gene: DVUA0106: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -63 score = 3.97852 sequence = CATGGCGTGATTCTCGCAT Gene: DvMF_2419: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) |
Gene: LI1153: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) |
Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) |
| sycN |
|
|
|
|
|
Gene: DESPIG_00688: Type III secretion chaperone SycN |
|
Gene: DVUA0105: Type III secretion chaperone SycN |
Gene: DvMF_2418: Type III secretion chaperone SycN |
|
Type III secretion chaperone SycN |
| DvMF_2417 |
|
|
|
|
|
Gene: DESPIG_00687: hypothetical protein |
|
Gene: DORF831: hypothetical protein |
Gene: DvMF_2417: hypothetical protein |
Gene: LI1152: hypothetical protein |
hypothetical protein |
| DvMF_2416 |
|
|
|
|
|
Gene: DESPIG_00686: Chaperone protein YscY (Yop proteins translocation protein Y) |
|
Gene: DVUA0104.1: Chaperone protein YscY (Yop proteins translocation protein Y) |
Gene: DvMF_2416: Chaperone protein YscY (Yop proteins translocation protein Y) |
|
Chaperone protein YscY (Yop proteins translocation protein Y) |
| sctV |
|
|
|
|
|
Gene: DESPIG_00685: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
|
Gene: DVUA0104: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
Gene: DvMF_2415: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
Gene: LI0548: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
| invX |
|
|
|
|
|
Gene: DESPIG_00684: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) |
|
Gene: DVUA0103: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) |
Gene: DvMF_2414: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) |
Gene: LI0549: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) |
Type III secretion inner membrane protein (YscS,homologous to flagellar export components) |
| escT |
|
|
|
|
|
Gene: DESPIG_00683: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) |
|
Gene: DVUA0102: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) |
Gene: DvMF_2413: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) |
Gene: LI0550: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) |
Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) |
| flhB |
|
|
|
|
|
Gene: DESPIG_00682: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
|
Gene: DVUA0101: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
Gene: DvMF_2412: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
Gene: LI0551: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) |
| flrC |
|
|
|
|
Gene: DMR_37620: sigma54 specific transcriptional regulator, Fis family |
Gene: DESPIG_00681: sigma54 specific transcriptional regulator, Fis family |
|
Gene: DVUA0100: sigma54 specific transcriptional regulator, Fis family |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -59 score = 4.09726 sequence = ACCGGCCCGCCCCCTGCCG Gene: DvMF_2411: sigma54 specific transcriptional regulator, Fis family |
Gene: LI1151: sigma54 specific transcriptional regulator, Fis family |
sigma54 specific transcriptional regulator, Fis family |
| DVUA0099 |
|
|
|
|
|
Gene: DESPIG_00680: protein serine/threonine phosphatase |
|
Gene: DVUA0099: protein serine/threonine phosphatase |
Gene: DvMF_2410: protein serine/threonine phosphatase |
Gene: LI1150: protein serine/threonine phosphatase |
protein serine/threonine phosphatase |
| era |
Gene: Dret_0084: GTP-binding protein Era |
Gene: Dbac_2740: GTP-binding protein Era |
*
Desulfovibrio desulfuricans G20 Site: position = -85 score = 4.04524 sequence = CGTGGCGCGCTGCTTGACT Gene: Dde_3591: GTP-binding protein Era |
Gene: Ddes_0371: GTP-binding protein Era |
Gene: DMR_46150: GTP-binding protein Era |
Gene: DESPIG_02949: GTP-binding protein Era |
Gene: Desal_3809: GTP-binding protein Era |
Gene: DVU0052: GTP-binding protein Era |
Gene: DvMF_2207: GTP-binding protein Era |
Gene: LI0644: GTP-binding protein Era |
GTP-binding protein Era |
| Dde_3590 |
Gene: Dret_0085: alanine racemase domain protein |
Gene: Dbac_2739: alanine racemase domain protein |
Gene: Dde_3590: alanine racemase domain protein |
Gene: Ddes_0372: alanine racemase domain protein |
Gene: DMR_46160: alanine racemase domain protein |
Gene: DESPIG_02950: alanine racemase domain protein |
Gene: Desal_3810: alanine racemase domain protein |
Gene: null: alanine racemase domain protein |
Gene: DvMF_2208: alanine racemase domain protein |
Gene: LI0643: alanine racemase domain protein |
alanine racemase domain protein |
| motB-2 |
|
Gene: Dbac_2736: Flagellar motor rotation protein MotB |
Gene: Dde_3587: Flagellar motor rotation protein MotB |
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|
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Gene: Desal_3813: Flagellar motor rotation protein MotB |
Gene: DVU0048: Flagellar motor rotation protein MotB |
Gene: DvMF_2211: Flagellar motor rotation protein MotB |
|
Flagellar motor rotation protein MotB |
| flhA |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -144 score = 4.85121 sequence = CCTGGCACGCGCCTTGTAT Gene: Dbac_3471: Flagellar biosynthesis pathway, component FlhA |
*
Desulfovibrio desulfuricans G20 Site: position = -145 score = 4.80099 sequence = GCTGGCACGGGCCTTGTAT Gene: Dde_0380: Flagellar biosynthesis pathway, component FlhA |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -175 score = 4.89813 sequence = TCTGGCACGGGCTTTGTAT Gene: Ddes_0331: Flagellar biosynthesis pathway, component FlhA |
*
Desulfovibrio magneticus RS-1 Site: position = -156 score = 4.67892 sequence = CTTGGCACAGGCCTTGTAT Gene: DMR_23880: Flagellar biosynthesis pathway, component FlhA |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -180 score = 4.78225 sequence = TTTGGCACAGGCCTTGTAT Gene: Desal_2594: Flagellar biosynthesis pathway, component FlhA |
*
Desulfovibrio vulgaris Hildenborough Site: position = -199 score = 4.80099 sequence = GCTGGCACGGGCCTTGTAT Gene: DVU3232: Flagellar biosynthesis pathway, component FlhA |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -177 score = 4.55389 sequence = GCTGGCACAGGCTTTGTAT Gene: DvMF_2014: Flagellar biosynthesis pathway, component FlhA |
Gene: LI0530: Flagellar biosynthesis pathway, component FlhA |
Flagellar biosynthesis pathway, component FlhA |
| cheY |
|
Gene: Dbac_3467: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: Dde_0384: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: Ddes_0324: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: DMR_23920: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
|
Gene: Desal_2598: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: DVU3228: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: DvMF_2010: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Gene: LI0526: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY |
| fliL |
|
Gene: Dbac_3466: Flagellar biosynthesis protein FliL |
Gene: Dde_0385: Flagellar biosynthesis protein FliL |
Gene: Ddes_0323: Flagellar biosynthesis protein FliL |
Gene: DMR_23930: Flagellar biosynthesis protein FliL |
|
Gene: Desal_2599: Flagellar biosynthesis protein FliL |
Gene: DVU3227: Flagellar biosynthesis protein FliL |
Gene: DvMF_2009: Flagellar biosynthesis protein FliL |
Gene: LI0525: Flagellar biosynthesis protein FliL |
Flagellar biosynthesis protein FliL |
| DVU3226 |
|
Gene: Dbac_3465: hypothetical protein |
Gene: Dde_0386: hypothetical protein |
Gene: Ddes_0322: hypothetical protein |
Gene: DMR_23940: hypothetical protein |
|
Gene: Desal_2600: hypothetical protein |
Gene: DVU3226: hypothetical protein |
Gene: DvMF_2008: hypothetical protein |
Gene: LI0524: hypothetical protein |
hypothetical protein |
| DVU3225 |
|
Gene: Dbac_3464: hypothetical protein |
Gene: Dde_0387: hypothetical protein |
Gene: Ddes_0321: hypothetical protein |
Gene: DMR_23950: hypothetical protein |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -77 score = 4.25167 sequence = GCTGGCGCACCTATTGCCC Gene: Desal_2601: hypothetical protein |
Gene: DVU3225: hypothetical protein |
Gene: DvMF_2007: hypothetical protein |
Gene: LI0523: hypothetical protein |
hypothetical protein |
| Ddes_0374 |
|
|
|
Gene: Ddes_0374: hypothetical protein |
|
|
|
|
|
|
hypothetical protein |
| DMR_22570 |
|
|
|
|
*
Desulfovibrio magneticus RS-1 Site: position = -60 score = 4.1754 sequence = GTTGGCATGACAATTGATA Gene: DMR_22570: hypothetical protein |
|
|
|
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|
hypothetical protein |
| DVU2392 |
|
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|
*
Desulfovibrio piger ATCC 29098 Site: position = -43 score = 4.0846 sequence = CCTGGTCTATCTTTTGCAA Gene: DESPIG_01879: Type III secretion chaperone, CesT family |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -74 score = 3.87551 sequence = CAAGGCGTGTTCCTTGCCA Gene: DVU2392: Type III secretion chaperone, CesT family |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -338 score = 3.97974 sequence = TGCGGCATGAACCATGCAG Gene: DvMF_2405: Type III secretion chaperone, CesT family |
|
Type III secretion chaperone, CesT family |
| DESPIG_01878 |
|
|
|
|
|
Gene: DESPIG_01878: hypothetical protein |
|
*
Desulfovibrio vulgaris Hildenborough Site: position = -106 score = 4.60544 sequence = AGTGGCACGCCTTTCGCTA Gene: DVU4010 |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -119 score = 4.23056 sequence = GGCGGCACGCTTGTTGTAA Gene: DvMF_2406: hypothetical protein |
|
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |