Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pspC gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -61
Score: 4.7315
Sequence: ACTGGCATGATCTCTGCTC
Locus tag: Dbac_1225
Name: pspA
Funciton: Phage shock protein A
Locus tag: Dbac_1224
Name: pspB
Funciton: phage shock protein B
Locus tag: Dbac_1223
Name: pspC
Funciton: Phage shock protein C
pspA-pspB-pspC -61 4.7 ACTGGCATGATCTCTGCTC Dbac_1225
Desulfovibrio desulfuricans G20
Position: -74
Score: 4.32814
Sequence: GCTGGCCTGTATGTTGCCA
Locus tag: Dde_3225
Name: pspB
Funciton: phage shock protein B
Locus tag: Dde_3224
Name: pspC
Funciton: Phage shock protein C
pspB-pspC -74 4.3 GCTGGCCTGTATGTTGCCA Dde_3225
Desulfovibrio vulgaris Hildenborough
Position: -46
Score: 4.69685
Sequence: CCCGGCACGCTTCGTGCTG
Locus tag: DVU2988
Name: pspA
Funciton: Phage shock protein A
Locus tag: DVU2987
Name: pspB
Funciton: phage shock protein B
Locus tag: DVU2986
Name: pspC
Funciton: Phage shock protein C
pspA-pspB-pspC -46 4.7 CCCGGCACGCTTCGTGCTG DVU2988
Desulfovibrio vulgaris str. Miyazaki F
Position: -272
Score: 4.52853
Sequence: GCTGGCCTGGCGGTTGCTG
Position: -251
Score: 4.38241
Sequence: GCTGGCCTGGCGGTTGCAG
Position: -230
Score: 4.52853
Sequence: GCTGGCCTGGCGGTTGCTG
Locus tag: DvMF_1800
Name: pspB
Funciton: phage shock protein B
Locus tag: DvMF_1801
Name: pspC
Funciton: Phage shock protein C
pspB-pspC -272 4.5 GCTGGCCTGGCGGTTGCTG DvMF_1800
-251 4.4 GCTGGCCTGGCGGTTGCAG
-230 4.5 GCTGGCCTGGCGGTTGCTG