Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing DVU2896 gene

Properties
Regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Built upon 487 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfovibrio desulfuricans G20
Position: -101
Score: 4.83223
Sequence: CATTGCACGCCTTTTGCAT
Locus tag: Dde_2960
Name: null
Funciton: Tetratricopeptide domain protein
Locus tag: Dde_2961
Name: null
Funciton: protein of unknown function DUF52
Dde_2960-Dde_2961 -101 4.8 CATTGCACGCCTTTTGCAT Dde_2960
Desulfovibrio salexigens DSM 2638
Position: -73
Score: 3.89263
Sequence: GTAGGCAGGAATATTGCAA
Locus tag: Desal_2983
Name: null
Funciton: Tetratricopeptide domain protein
Locus tag: Desal_2982
Name: null
Funciton: protein of unknown function DUF52
Desal_2983-Desal_2982 -73 3.9 GTAGGCAGGAATATTGCAA Desal_2983
Desulfovibrio vulgaris Hildenborough
Position: -13
Score: 5.02962
Sequence: CATTGCACGGTTCTTGCTT
Locus tag: DVU2896
Name: null
Funciton: TPR domain protein
Locus tag: DVU2897
Name: null
Funciton: Candidate gene for the hypothesized phosphomevalonate decarboxylase; COG1355, Predicted dioxygenase
DVU2896-DVU2897 -13 5 CATTGCACGGTTCTTGCTT DVU2896
Desulfovibrio vulgaris str. Miyazaki F
Position: -146
Score: 4.43248
Sequence: CGCTGCACGCTTTTTGCTA
Locus tag: DvMF_1325
Name: null
Funciton: Tetratricopeptide domain protein
Locus tag: DvMF_1326
Name: null
Funciton: protein of unknown function DUF52
DvMF_1325-DvMF_1326 -146 4.4 CGCTGCACGCTTTTTGCTA DvMF_1325